BLASTX nr result

ID: Coptis21_contig00028943 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00028943
         (308 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI37043.3| unnamed protein product [Vitis vinifera]              135   4e-30
ref|XP_002273575.1| PREDICTED: probable cellulose synthase A cat...   121   7e-26
emb|CAN75642.1| hypothetical protein VITISV_029179 [Vitis vinifera]   107   1e-21
gb|AAT66941.1| CesA2 [Acacia mangium]                                  91   1e-16
gb|ACS94418.1| cellulose synthase A [Leucaena leucocephala]            91   1e-16

>emb|CBI37043.3| unnamed protein product [Vitis vinifera]
          Length = 904

 Score =  135 bits (339), Expect = 4e-30
 Identities = 64/101 (63%), Positives = 81/101 (80%)
 Frame = -3

Query: 303 MSFKSILWRERLSQWKLARQKFLFQFGSQKEVPDASDCASLEEVKVHQLELDNEIRFPLS 124
           MSF S +W ERL QWKLAR++ L + GSQ+E+PD SD  S++E+++ Q E+DNE R  LS
Sbjct: 1   MSFNSNIWEERLCQWKLARERLLRRTGSQEEIPDPSDLGSVDEMELRQPEMDNESRQFLS 60

Query: 123 RKVPVPSSRINPYRVIILFRVVILAFFLQYRLTHPVQNAYG 1
           RKVP+P S I PYRV ++FR+VILAFFL+YRLTHPV NAYG
Sbjct: 61  RKVPIPPSMIYPYRVSVIFRLVILAFFLRYRLTHPVHNAYG 101


>ref|XP_002273575.1| PREDICTED: probable cellulose synthase A catalytic subunit 8
           [UDP-forming]-like [Vitis vinifera]
          Length = 887

 Score =  121 bits (303), Expect = 7e-26
 Identities = 64/126 (50%), Positives = 81/126 (64%), Gaps = 25/126 (19%)
 Frame = -3

Query: 303 MSFKSILWRERLSQWKLARQKFLFQFGSQKEVPDASDCASLEEVKVHQLEL--------- 151
           MSF S +W ERL QWKLAR++ L + GSQ+E+PD SD  S++E+++ Q E+         
Sbjct: 1   MSFNSNIWEERLCQWKLARERLLRRTGSQEEIPDPSDLGSVDEMELRQPEMYANYCHSEY 60

Query: 150 ----------------DNEIRFPLSRKVPVPSSRINPYRVIILFRVVILAFFLQYRLTHP 19
                           DNE R  LSRKVP+P S I PYRV ++FR+VILAFFL+YRLTHP
Sbjct: 61  VFSIRFRMLLNITWQWDNESRQFLSRKVPIPPSMIYPYRVSVIFRLVILAFFLRYRLTHP 120

Query: 18  VQNAYG 1
           V NAYG
Sbjct: 121 VHNAYG 126


>emb|CAN75642.1| hypothetical protein VITISV_029179 [Vitis vinifera]
          Length = 1036

 Score =  107 bits (267), Expect = 1e-21
 Identities = 57/117 (48%), Positives = 74/117 (63%), Gaps = 25/117 (21%)
 Frame = -3

Query: 276 ERLSQWKLARQKFLFQFGSQKEVPDASDCASLEEVKVHQLEL------------------ 151
           +RL QWKLAR++ L + GSQ+E+PD SD  S++E+++ Q E+                  
Sbjct: 133 DRLCQWKLARERLLRRTGSQEEIPDPSDLGSVDEMELRQPEMYANYCHSEYVFSRRFRML 192

Query: 150 -------DNEIRFPLSRKVPVPSSRINPYRVIILFRVVILAFFLQYRLTHPVQNAYG 1
                  DNE R  LSRKVP+P S I PYRV ++FR+VIL FFL+YRLTHPV NAYG
Sbjct: 193 LNITWQWDNESRQFLSRKVPIPPSMIYPYRVSVIFRLVILVFFLRYRLTHPVHNAYG 249


>gb|AAT66941.1| CesA2 [Acacia mangium]
          Length = 1075

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 43/98 (43%), Positives = 67/98 (68%), Gaps = 2/98 (2%)
 Frame = -3

Query: 291 SILWRERLSQWKLARQKFLFQFGSQKEVPD--ASDCASLEEVKVHQLELDNEIRFPLSRK 118
           ++ W+ER+  WK+ ++K +    + +   +  A D  +  +V V    L++E R PLSRK
Sbjct: 197 NVAWKERVDGWKMKQEKNVVPMSTGQAASERGAGDIDASTDVLVDDSLLNDEARQPLSRK 256

Query: 117 VPVPSSRINPYRVIILFRVVILAFFLQYRLTHPVQNAY 4
           V +PSSRINPYR++I+ R++IL FFL YR+T+PV+NAY
Sbjct: 257 VSIPSSRINPYRMVIILRLIILCFFLHYRITNPVRNAY 294


>gb|ACS94418.1| cellulose synthase A [Leucaena leucocephala]
          Length = 410

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 43/98 (43%), Positives = 66/98 (67%), Gaps = 2/98 (2%)
 Frame = -3

Query: 291 SILWRERLSQWKLARQKFLFQFGSQKEVPD--ASDCASLEEVKVHQLELDNEIRFPLSRK 118
           ++ W+ER+  WK+ ++K +    + +   +  A D  +  +V V    L++E R PLSRK
Sbjct: 197 NVAWKERVDGWKMKQEKNVVPMSTGQAASERGAGDIDASTDVLVEDSLLNDEARQPLSRK 256

Query: 117 VPVPSSRINPYRVIILFRVVILAFFLQYRLTHPVQNAY 4
           V +PSSRINPYR++I+ R++IL  FL YR+T+PVQNAY
Sbjct: 257 VSIPSSRINPYRMVIILRLIILCMFLHYRITNPVQNAY 294


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