BLASTX nr result

ID: Coptis21_contig00028939 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00028939
         (912 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279279.1| PREDICTED: myb-related protein B [Vitis vini...   283   3e-74
ref|XP_002318324.1| predicted protein [Populus trichocarpa] gi|2...   275   8e-72
gb|ACN97178.1| MYB transcription factor [Populus trichocarpa]         275   1e-71
ref|XP_002309771.1| predicted protein [Populus trichocarpa] gi|2...   275   1e-71
emb|CAN83952.1| hypothetical protein VITISV_022615 [Vitis vinifera]   267   2e-69

>ref|XP_002279279.1| PREDICTED: myb-related protein B [Vitis vinifera]
           gi|297734369|emb|CBI15616.3| unnamed protein product
           [Vitis vinifera]
          Length = 221

 Score =  283 bits (725), Expect = 3e-74
 Identities = 151/228 (66%), Positives = 171/228 (75%), Gaps = 4/228 (1%)
 Frame = -2

Query: 911 EKLRELVEMYGPHNWNAIAEKLHGRSGKSCRLRWFNQLDPRINRSPFTEEEEERLLASHR 732
           EKLRELVE +GPHNWNAIAEKL GRSGKSCRLRWFNQLDPRINR+PFTEEEEERLLASHR
Sbjct: 13  EKLRELVERHGPHNWNAIAEKLPGRSGKSCRLRWFNQLDPRINRAPFTEEEEERLLASHR 72

Query: 731 VHGNRWSIIARLFPGRTDNAVKNHWHVIMARRCRERSRFYAKRAAQSLISGRKSVSKHEM 552
           +HGNRW++IARLFPGRTDNAVKNHWHVIMARRCRE+S+FYAKRAAQS I+ RKS+SK + 
Sbjct: 73  IHGNRWAVIARLFPGRTDNAVKNHWHVIMARRCREKSKFYAKRAAQSWINERKSISKPDR 132

Query: 551 GMKI--EHRNHSSIREYYERCSDPIIYNHHANLKNIYSPVPNYCPAV--DKNDPVEFYDF 384
              I  + RN SS   Y E C + +I                +C  +  D+  PVEFYDF
Sbjct: 133 QQMIGCDTRNLSS---YVENCYENMI----------------HCTKMLEDRTQPVEFYDF 173

Query: 383 LQVNTDSNRSEVINHARNXXXXXXXEARKQMKDEAGNPFIDFLSIGSS 240
           L VNTDSNRSEVI+HAR        EA    + +AG PFIDFLS+GSS
Sbjct: 174 LNVNTDSNRSEVIDHARRDDEEVEQEAMDH-QSKAGVPFIDFLSVGSS 220


>ref|XP_002318324.1| predicted protein [Populus trichocarpa] gi|222858997|gb|EEE96544.1|
           predicted protein [Populus trichocarpa]
           gi|225626259|gb|ACN97179.1| MYB transcription factor
           [Populus trichocarpa]
          Length = 243

 Score =  275 bits (704), Expect = 8e-72
 Identities = 146/227 (64%), Positives = 172/227 (75%), Gaps = 6/227 (2%)
 Frame = -2

Query: 911 EKLRELVEMYGPHNWNAIAEKLHGRSGKSCRLRWFNQLDPRINRSPFTEEEEERLLASHR 732
           EKL+ELVE YGPHNWNAIAEKL GRSGKSCRLRWFNQLDPRINRSPFTEEEEERLLASHR
Sbjct: 13  EKLKELVEKYGPHNWNAIAEKLQGRSGKSCRLRWFNQLDPRINRSPFTEEEEERLLASHR 72

Query: 731 VHGNRWSIIARLFPGRTDNAVKNHWHVIMARRCRERSRFYAKRAAQSLISGRKSVSKHE- 555
           +HGNRW+IIAR FPGRTDNAVKNHWHVIMARR RERSR +AKRAAQ+L++  K  SK + 
Sbjct: 73  IHGNRWAIIARFFPGRTDNAVKNHWHVIMARRYRERSRLHAKRAAQTLVNDNKLSSKQDH 132

Query: 554 MGMKIEHRNHSSI-REYYERCSDPIIYNHH---ANLKNIYSPVPNYCPAVDKNDPVEFYD 387
           M M  E RN SS  ++Y E+     +  H    A  K  Y+  P++C   D++ P+EFYD
Sbjct: 133 MHMDCETRNFSSFSKKYCEKYGQYPMVTHSYLPAFCKEFYNEDPSHCE--DQSRPIEFYD 190

Query: 386 FLQVNTDSNRSEVINHA-RNXXXXXXXEARKQMKDEAGNPFIDFLSI 249
           FLQVNTDSN+SEVI++A R+       EA +  + +A  PFIDF S+
Sbjct: 191 FLQVNTDSNKSEVIDNARRDDEEVDQQEALENNQSKADVPFIDFFSV 237


>gb|ACN97178.1| MYB transcription factor [Populus trichocarpa]
          Length = 236

 Score =  275 bits (702), Expect = 1e-71
 Identities = 143/225 (63%), Positives = 171/225 (76%), Gaps = 5/225 (2%)
 Frame = -2

Query: 911 EKLRELVEMYGPHNWNAIAEKLHGRSGKSCRLRWFNQLDPRINRSPFTEEEEERLLASHR 732
           EKL+ELVE YGPHNWNAIAEKLHGRSGKSCRLRWFNQLDPRINRSPFTEEEEERLLASHR
Sbjct: 13  EKLKELVEKYGPHNWNAIAEKLHGRSGKSCRLRWFNQLDPRINRSPFTEEEEERLLASHR 72

Query: 731 VHGNRWSIIARLFPGRTDNAVKNHWHVIMARRCRERSRFYAKRAAQSLISGRKSVSKHEM 552
           +HGNRW++IARLFPGRTDNAVKNHWHVIMARR RERSR +AKR AQ+L++ +K  SK +M
Sbjct: 73  IHGNRWAVIARLFPGRTDNAVKNHWHVIMARRYRERSRLHAKRTAQALVNEQKFSSKQDM 132

Query: 551 GMKIEHRNHSS-IREYYERCSDPIIYNHH---ANLKNIYSPVPNYCPAVDKNDPVEFYDF 384
            +  E R+ SS +++Y E+     +  H    A  K  Y+   + C   D+N P+EFYDF
Sbjct: 133 QINCETRSFSSFVKKYCEKFGQYPLITHSYLPAFWKEFYNDDLSNCE--DQNRPIEFYDF 190

Query: 383 LQVNTDSNRSEVINHA-RNXXXXXXXEARKQMKDEAGNPFIDFLS 252
           LQVNT+SN+SEVI++A R        E   + + +AG PFIDF S
Sbjct: 191 LQVNTESNKSEVIDNARREDEEVDQQEVILEHQSKAGVPFIDFFS 235


>ref|XP_002309771.1| predicted protein [Populus trichocarpa] gi|222852674|gb|EEE90221.1|
           predicted protein [Populus trichocarpa]
          Length = 247

 Score =  275 bits (702), Expect = 1e-71
 Identities = 142/237 (59%), Positives = 174/237 (73%), Gaps = 9/237 (3%)
 Frame = -2

Query: 911 EKLRELVEMYGPHNWNAIAEKLHGRSGKSCRLRWFNQLDPRINRSPFTEEEEERLLASHR 732
           EKL ELVE YGPHNWN+IAEKL GRSGKSCRLRWFNQLDPRINRSPFTEEEEERLLA HR
Sbjct: 13  EKLLELVEQYGPHNWNSIAEKLQGRSGKSCRLRWFNQLDPRINRSPFTEEEEERLLACHR 72

Query: 731 VHGNRWSIIARLFPGRTDNAVKNHWHVIMARRCRERSRFYAKRAAQSLISGRKSVSKHEM 552
           +HGN+W++IA+ FPGRTDNAVKNHWHVIMARRCRERS+ +AKRA+ SL+   +  S    
Sbjct: 73  IHGNKWAVIAKQFPGRTDNAVKNHWHVIMARRCRERSKIHAKRASPSLLVNEQKPSFSNQ 132

Query: 551 GMKI---EHRNH--SSIREYYERCSD----PIIYNHHANLKNIYSPVPNYCPAVDKNDPV 399
            ++I   E RN+  S + +Y+E   D    P   N+ +  K++YS  P++C    KN P+
Sbjct: 133 DVRIMNCEPRNNAPSFVHKYFESYCDHYHHPFTRNYTSICKDLYSQNPSHCEG--KNQPL 190

Query: 398 EFYDFLQVNTDSNRSEVINHARNXXXXXXXEARKQMKDEAGNPFIDFLSIGSS*SEL 228
           EFYDFLQV T+S++SEVI++AR        EA++  K  AG PFIDFLS G+  S L
Sbjct: 191 EFYDFLQVKTESSKSEVIDNARRDDVEVDQEAKELPKSRAGFPFIDFLSAGNQVSGL 247


>emb|CAN83952.1| hypothetical protein VITISV_022615 [Vitis vinifera]
          Length = 371

 Score =  267 bits (683), Expect = 2e-69
 Identities = 144/224 (64%), Positives = 165/224 (73%), Gaps = 4/224 (1%)
 Frame = -2

Query: 911 EKLRELVEMYGPHNWNAIAEKLHGRSGKSCRLRWFNQLDPRINRSPFTEEEEERLLASHR 732
           EKLRELVE +GPHNWNAIAEKL GRSGKSCRLRWFNQLDPRINR+PFTEEEEERLLASHR
Sbjct: 13  EKLRELVERHGPHNWNAIAEKLPGRSGKSCRLRWFNQLDPRINRAPFTEEEEERLLASHR 72

Query: 731 VHGNRWSIIARLFPGRTDNAVKNHWHVIMARRCRERSRFYAKRAAQSLISGRKSVSKHEM 552
           +HGNRW++IARLFPGRTDNAVKNHWHVIMARRCRE+S+FYAKRAAQS I+ RKS+SK + 
Sbjct: 73  IHGNRWAVIARLFPGRTDNAVKNHWHVIMARRCREKSKFYAKRAAQSWINERKSISKPDR 132

Query: 551 GMKI--EHRNHSSIREYYERCSDPIIYNHHANLKNIYSPVPNYCPAV--DKNDPVEFYDF 384
              I  + RN SS   Y E C + +I                +C  +  D+  PVEFYDF
Sbjct: 133 QQMIGCDTRNLSS---YVENCYENMI----------------HCTKMLEDRTQPVEFYDF 173

Query: 383 LQVNTDSNRSEVINHARNXXXXXXXEARKQMKDEAGNPFIDFLS 252
           L VNTDSNRSEVI+HAR        EA    + +AG P+ +F S
Sbjct: 174 LNVNTDSNRSEVIDHARRDDEEVEQEAMDH-QSKAG-PYFEFTS 215


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