BLASTX nr result

ID: Coptis21_contig00028919 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00028919
         (395 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN60856.1| hypothetical protein VITISV_026074 [Vitis vinifera]    95   5e-18
ref|XP_002275476.2| PREDICTED: ubiquitin carboxyl-terminal hydro...    94   1e-17
emb|CBI21539.3| unnamed protein product [Vitis vinifera]               94   1e-17
ref|XP_002532774.1| ubiquitin-specific protease, putative [Ricin...    94   1e-17
ref|XP_003524288.1| PREDICTED: ubiquitin carboxyl-terminal hydro...    94   1e-17

>emb|CAN60856.1| hypothetical protein VITISV_026074 [Vitis vinifera]
          Length = 559

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 50/80 (62%), Positives = 59/80 (73%), Gaps = 2/80 (2%)
 Frame = +3

Query: 144 YQLVSVVEHFGRVGTGHYTVYRRVKEESNGEDSVRQVKPA--QWFCASDSKVFSVSEGDV 317
           Y LVSVVEHFGR G+GHYTVYRRV+ E   E    Q  P+   WFC SDS+V+SVSE DV
Sbjct: 457 YHLVSVVEHFGRDGSGHYTVYRRVRTEQEKEFHNGQFAPSLGHWFCISDSQVYSVSEKDV 516

Query: 318 FTAEASMLFYERIEVSKQVP 377
             AEAS+LFYERI V +++P
Sbjct: 517 LXAEASLLFYERI-VDEKIP 535


>ref|XP_002275476.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 27-like [Vitis
           vinifera]
          Length = 641

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 48/73 (65%), Positives = 54/73 (73%), Gaps = 2/73 (2%)
 Frame = +3

Query: 144 YQLVSVVEHFGRVGTGHYTVYRRVKEESNGEDSVRQVKPA--QWFCASDSKVFSVSEGDV 317
           Y LVSVVEHFGR G+GHYTVYRRV+ E   E    Q  P+   WFC SDS+V+SVSE DV
Sbjct: 512 YHLVSVVEHFGRDGSGHYTVYRRVRTEQEKEFHNGQFAPSLGHWFCISDSQVYSVSEKDV 571

Query: 318 FTAEASMLFYERI 356
             AEAS+LFYERI
Sbjct: 572 LAAEASLLFYERI 584


>emb|CBI21539.3| unnamed protein product [Vitis vinifera]
          Length = 532

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 48/73 (65%), Positives = 54/73 (73%), Gaps = 2/73 (2%)
 Frame = +3

Query: 144 YQLVSVVEHFGRVGTGHYTVYRRVKEESNGEDSVRQVKPA--QWFCASDSKVFSVSEGDV 317
           Y LVSVVEHFGR G+GHYTVYRRV+ E   E    Q  P+   WFC SDS+V+SVSE DV
Sbjct: 457 YHLVSVVEHFGRDGSGHYTVYRRVRTEQEKEFHNGQFAPSLGHWFCISDSQVYSVSEKDV 516

Query: 318 FTAEASMLFYERI 356
             AEAS+LFYERI
Sbjct: 517 LAAEASLLFYERI 529


>ref|XP_002532774.1| ubiquitin-specific protease, putative [Ricinus communis]
           gi|223527484|gb|EEF29613.1| ubiquitin-specific protease,
           putative [Ricinus communis]
          Length = 503

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 51/92 (55%), Positives = 66/92 (71%), Gaps = 2/92 (2%)
 Frame = +3

Query: 87  DIKMETREIHPLVPSKNSMYQLVSVVEHFGRVGTGHYTVYRRVKEESNGEDSVRQVKPA- 263
           +++ +TR ++  VPS+  +Y+LVSVVEHFG+ G GHYTVYR V  +S  E +   + P+ 
Sbjct: 413 NVQPDTRMLN-FVPSQPLVYRLVSVVEHFGKTGGGHYTVYRSVISKSPKECTDETLNPSI 471

Query: 264 -QWFCASDSKVFSVSEGDVFTAEASMLFYERI 356
            QWFC SDS V SVSE DV  AEAS+LFYERI
Sbjct: 472 PQWFCISDSDVQSVSEEDVLAAEASILFYERI 503


>ref|XP_003524288.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 27-like [Glycine
           max]
          Length = 549

 Score = 93.6 bits (231), Expect = 1e-17
 Identities = 46/81 (56%), Positives = 59/81 (72%), Gaps = 2/81 (2%)
 Frame = +3

Query: 120 LVPSKNSMYQLVSVVEHFGRVGTGHYTVYRRVKEESNGE--DSVRQVKPAQWFCASDSKV 293
           LVP +  +YQLVSVVEHFG+ G+GHYTVYR V+ ES+ +  D      P +WFC SDS+V
Sbjct: 466 LVPQETCLYQLVSVVEHFGKAGSGHYTVYRSVRVESSEDVSDDYLNQTPMRWFCISDSQV 525

Query: 294 FSVSEGDVFTAEASMLFYERI 356
            +VS   V ++EAS+LFYERI
Sbjct: 526 HAVSVEGVLSSEASLLFYERI 546


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