BLASTX nr result

ID: Coptis21_contig00028904 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00028904
         (279 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002533711.1| Flavin-containing amine oxidase domain-conta...   114   6e-24
ref|XP_003527270.1| PREDICTED: lysine-specific histone demethyla...   111   7e-23
ref|XP_002281860.2| PREDICTED: lysine-specific histone demethyla...   108   6e-22
ref|XP_002316929.1| hypothetical protein POPTRDRAFT_568963 [Popu...   107   8e-22
emb|CBI20361.3| unnamed protein product [Vitis vinifera]              105   3e-21

>ref|XP_002533711.1| Flavin-containing amine oxidase domain-containing protein, putative
           [Ricinus communis] gi|223526385|gb|EEF28674.1|
           Flavin-containing amine oxidase domain-containing
           protein, putative [Ricinus communis]
          Length = 750

 Score =  114 bits (286), Expect = 6e-24
 Identities = 55/92 (59%), Positives = 70/92 (76%)
 Frame = +1

Query: 1   RLFFAGEATSRQHPATMHGAFLSGLREASHIFRIRKTWDNDISECIPKNIESCSNHLADL 180
           RLFFAGEAT+RQ+PATMHGAFLSGLREAS I R+ ++W  +  + + +N+   ++ L DL
Sbjct: 564 RLFFAGEATTRQYPATMHGAFLSGLREASRILRVSRSWQINSRKSMHRNVGLSNDALVDL 623

Query: 181 FTEPDLAFGKFSFIFDPSKKDPESMGIIKVAF 276
           F  PDLAFG FSFI +P   DPESMGI++V F
Sbjct: 624 FRRPDLAFGNFSFIDNPLIDDPESMGILRVTF 655


>ref|XP_003527270.1| PREDICTED: lysine-specific histone demethylase 1 homolog 2-like
           [Glycine max]
          Length = 743

 Score =  111 bits (277), Expect = 7e-23
 Identities = 58/93 (62%), Positives = 73/93 (78%)
 Frame = +1

Query: 1   RLFFAGEATSRQHPATMHGAFLSGLREASHIFRIRKTWDNDISECIPKNIESCSNHLADL 180
           RLFFAGEATSRQ+PATMHGAFLSGLREASHI+R  +   N+  +C+PKNI S ++ L DL
Sbjct: 564 RLFFAGEATSRQYPATMHGAFLSGLREASHIYRSARI-QNNPRKCMPKNIVS-NDILGDL 621

Query: 181 FTEPDLAFGKFSFIFDPSKKDPESMGIIKVAFG 279
           F  PDL FGKF+FIF PS ++ +S G+++V  G
Sbjct: 622 FKWPDLEFGKFAFIFYPSPENLQSTGLLQVTIG 654


>ref|XP_002281860.2| PREDICTED: lysine-specific histone demethylase 1 homolog 2-like
           [Vitis vinifera]
          Length = 755

 Score =  108 bits (269), Expect = 6e-22
 Identities = 53/93 (56%), Positives = 71/93 (76%)
 Frame = +1

Query: 1   RLFFAGEATSRQHPATMHGAFLSGLREASHIFRIRKTWDNDISECIPKNIESCSNHLADL 180
           RLFFAGEAT+RQ+PA+MHGAFLSGLREAS I    ++  ++  + + KNI   ++ L DL
Sbjct: 564 RLFFAGEATNRQYPASMHGAFLSGLREASCILGATRSHQSNSRKLMQKNIGPSNDVLIDL 623

Query: 181 FTEPDLAFGKFSFIFDPSKKDPESMGIIKVAFG 279
           F  PDLAFGKFSFIF+P   DP++MGI++++ G
Sbjct: 624 FKRPDLAFGKFSFIFNPLTVDPKAMGIMRISVG 656


>ref|XP_002316929.1| hypothetical protein POPTRDRAFT_568963 [Populus trichocarpa]
           gi|222859994|gb|EEE97541.1| hypothetical protein
           POPTRDRAFT_568963 [Populus trichocarpa]
          Length = 712

 Score =  107 bits (268), Expect = 8e-22
 Identities = 53/92 (57%), Positives = 67/92 (72%)
 Frame = +1

Query: 1   RLFFAGEATSRQHPATMHGAFLSGLREASHIFRIRKTWDNDISECIPKNIESCSNHLADL 180
           RLFFAGEAT+RQ+PATMHGAFLSGLREAS I    ++  N+  + +PKN+   ++ L  L
Sbjct: 528 RLFFAGEATTRQYPATMHGAFLSGLREASRILSANRSQQNNPRKSLPKNLGISNDTLIGL 587

Query: 181 FTEPDLAFGKFSFIFDPSKKDPESMGIIKVAF 276
           F  PDL FG FSFI +P  +DP SMGI++V F
Sbjct: 588 FKWPDLTFGNFSFISNPLTEDPNSMGIMRVTF 619


>emb|CBI20361.3| unnamed protein product [Vitis vinifera]
          Length = 667

 Score =  105 bits (263), Expect = 3e-21
 Identities = 52/90 (57%), Positives = 69/90 (76%)
 Frame = +1

Query: 1   RLFFAGEATSRQHPATMHGAFLSGLREASHIFRIRKTWDNDISECIPKNIESCSNHLADL 180
           RLFFAGEAT+RQ+PA+MHGAFLSGLREAS I    ++  ++  + + KNI   ++ L DL
Sbjct: 499 RLFFAGEATNRQYPASMHGAFLSGLREASCILGATRSHQSNSRKLMQKNIGPSNDVLIDL 558

Query: 181 FTEPDLAFGKFSFIFDPSKKDPESMGIIKV 270
           F  PDLAFGKFSFIF+P   DP++MGI+++
Sbjct: 559 FKRPDLAFGKFSFIFNPLTVDPKAMGIMRI 588


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