BLASTX nr result

ID: Coptis21_contig00028900 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00028900
         (444 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACX85638.1| putative transposase [Cucumis melo]                    147   1e-33
ref|XP_003591965.1| Elongation factor 1-alpha [Medicago truncatu...   143   1e-32
gb|ABA94758.1| hAT family dimerisation domain containing protein...   142   2e-32
ref|NP_001176010.1| Os10g0118700 [Oryza sativa Japonica Group] g...   142   2e-32
ref|NP_001042140.2| Os01g0170400 [Oryza sativa Japonica Group] g...   142   2e-32

>gb|ACX85638.1| putative transposase [Cucumis melo]
          Length = 680

 Score =  147 bits (370), Expect = 1e-33
 Identities = 75/147 (51%), Positives = 103/147 (70%)
 Frame = +1

Query: 4   VMEHKYLHMRCCAHILNLVVCDGLKDVNDAIFRVRTAVRYVRSSPSRLARFKECVKEEQI 183
           V++ +++H+RCCAHILNL+V D LKD++ +I R+R AV+YVRSSP+RL  FK+  KE+++
Sbjct: 267 VLDGEFIHIRCCAHILNLIVSDALKDLHVSIIRIRNAVKYVRSSPARLQIFKDFAKEDKM 326

Query: 184 ECTKLLCLDVATRWNATFMMLEVAEKFQSAFEILELEDPQYTLYFDDDKIKGPPTLTDWN 363
                L +DV TRWN+TF ML+ A K Q  FE LE  DP Y L  DD      PT  DW+
Sbjct: 327 STKNCLTMDVPTRWNSTFTMLDGAIKCQKTFERLEEHDPSY-LPKDD-----IPTTEDWD 380

Query: 364 SARLFVKFLRVFYKATLRFSGSRYVTS 444
           +A++FVKFL+ F + T++FS S  VTS
Sbjct: 381 NAKVFVKFLKTFSEVTMKFSASMSVTS 407


>ref|XP_003591965.1| Elongation factor 1-alpha [Medicago truncatula]
           gi|355481013|gb|AES62216.1| Elongation factor 1-alpha
           [Medicago truncatula]
          Length = 1001

 Score =  143 bits (361), Expect = 1e-32
 Identities = 72/147 (48%), Positives = 95/147 (64%)
 Frame = +1

Query: 4   VMEHKYLHMRCCAHILNLVVCDGLKDVNDAIFRVRTAVRYVRSSPSRLARFKECVKEEQI 183
           VM   Y HMRCCAH+LNL+V DGL+D++++I R+R AV YVRSSP RL++FK  + E+ +
Sbjct: 284 VMNGNYFHMRCCAHVLNLIVKDGLEDMDESILRIRQAVWYVRSSPLRLSKFKGLIDEQSV 343

Query: 184 ECTKLLCLDVATRWNATFMMLEVAEKFQSAFEILELEDPQYTLYFDDDKIKGPPTLTDWN 363
                +CLDV TRWN T++M   A K +  FE L   D +Y       K KG PT  DW 
Sbjct: 344 GGKSSVCLDVETRWNTTYLMAAAALKHEKTFEELCFLDQKYVNEL-TTKGKGVPTQDDWK 402

Query: 364 SARLFVKFLRVFYKATLRFSGSRYVTS 444
             R  + FL++FY AT+R SGS Y+TS
Sbjct: 403 RVREILPFLKMFYDATVRISGSSYLTS 429


>gb|ABA94758.1| hAT family dimerisation domain containing protein [Oryza sativa
           Japonica Group]
          Length = 932

 Score =  142 bits (359), Expect = 2e-32
 Identities = 69/147 (46%), Positives = 92/147 (62%)
 Frame = +1

Query: 4   VMEHKYLHMRCCAHILNLVVCDGLKDVNDAIFRVRTAVRYVRSSPSRLARFKECVKEEQI 183
           V E +Y+HMRC AHI+NL+V DGLK++  +I RVR AV+++R   SRL +FK+C +  ++
Sbjct: 549 VAEGEYIHMRCAAHIINLIVGDGLKEIGTSIQRVRAAVKFIRCGTSRLVKFKKCAELAKV 608

Query: 184 ECTKLLCLDVATRWNATFMMLEVAEKFQSAFEILELEDPQYTLYFDDDKIKGPPTLTDWN 363
           +    L LD+ TRWN+T++ML  AEK+Q AFE    EDP Y L  + +   G PT  DW 
Sbjct: 609 QSKAFLNLDICTRWNSTYLMLNAAEKYQKAFERYSDEDPYYKLELEGENGPGVPTRADWE 668

Query: 364 SARLFVKFLRVFYKATLRFSGSRYVTS 444
            AR    FL  FY  TLR S     TS
Sbjct: 669 KARKMADFLEHFYDLTLRVSVQSRTTS 695


>ref|NP_001176010.1| Os10g0118700 [Oryza sativa Japonica Group]
           gi|16924038|gb|AAL31650.1|AC079179_5 Putative Tam3-like
           transposon protein [Oryza sativa]
           gi|31429904|gb|AAP51893.1| hAT family dimerisation
           domain containing protein [Oryza sativa Japonica Group]
           gi|255679178|dbj|BAH94738.1| Os10g0118700 [Oryza sativa
           Japonica Group]
          Length = 737

 Score =  142 bits (359), Expect = 2e-32
 Identities = 69/147 (46%), Positives = 92/147 (62%)
 Frame = +1

Query: 4   VMEHKYLHMRCCAHILNLVVCDGLKDVNDAIFRVRTAVRYVRSSPSRLARFKECVKEEQI 183
           V E +Y+HMRC AHI+NL+V DGLK++  +I RVR AV+++R   SRL +FK+C +  ++
Sbjct: 307 VAEGEYIHMRCAAHIINLIVGDGLKEIGTSIQRVRAAVKFIRCGTSRLVKFKKCAELAKV 366

Query: 184 ECTKLLCLDVATRWNATFMMLEVAEKFQSAFEILELEDPQYTLYFDDDKIKGPPTLTDWN 363
           +    L LD+ TRWN+T++ML  AEK+Q AFE    EDP Y L  + +   G PT  DW 
Sbjct: 367 QSKAFLNLDICTRWNSTYLMLNAAEKYQKAFERYSDEDPYYKLELEGENGPGVPTRADWE 426

Query: 364 SARLFVKFLRVFYKATLRFSGSRYVTS 444
            AR    FL  FY  TLR S     TS
Sbjct: 427 KARKMADFLEHFYDLTLRVSVQSRTTS 453


>ref|NP_001042140.2| Os01g0170400 [Oryza sativa Japonica Group]
           gi|255672914|dbj|BAF04054.2| Os01g0170400 [Oryza sativa
           Japonica Group]
          Length = 664

 Score =  142 bits (359), Expect = 2e-32
 Identities = 69/147 (46%), Positives = 92/147 (62%)
 Frame = +1

Query: 4   VMEHKYLHMRCCAHILNLVVCDGLKDVNDAIFRVRTAVRYVRSSPSRLARFKECVKEEQI 183
           V E +Y+HMRC AHI+NL+V DGLK++  +I RVR AV+++R   SRL +FK+C +  ++
Sbjct: 161 VAEGEYIHMRCAAHIINLIVGDGLKEIGTSIQRVRAAVKFIRCGTSRLVKFKKCAELAKV 220

Query: 184 ECTKLLCLDVATRWNATFMMLEVAEKFQSAFEILELEDPQYTLYFDDDKIKGPPTLTDWN 363
           +    L LD+ TRWN+T++ML  AEK+Q AFE    EDP Y L  + +   G PT  DW 
Sbjct: 221 QSKAFLNLDICTRWNSTYLMLNAAEKYQKAFERYSDEDPYYKLELEGENGPGVPTRADWE 280

Query: 364 SARLFVKFLRVFYKATLRFSGSRYVTS 444
            AR    FL  FY  TLR S     TS
Sbjct: 281 KARKMADFLEHFYDLTLRVSVQSRTTS 307


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