BLASTX nr result

ID: Coptis21_contig00028899 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00028899
         (411 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN61798.1| hypothetical protein VITISV_044291 [Vitis vinifera]    85   5e-15
ref|XP_002460070.1| hypothetical protein SORBIDRAFT_02g022302 [S...    77   2e-12
ref|XP_003575784.1| PREDICTED: uncharacterized protein LOC100844...    73   3e-11
gb|ADN33674.1| transposase [Cucumis melo subsp. melo]                  72   4e-11
gb|ACX85638.1| putative transposase [Cucumis melo]                     72   4e-11

>emb|CAN61798.1| hypothetical protein VITISV_044291 [Vitis vinifera]
          Length = 563

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 49/131 (37%), Positives = 76/131 (58%), Gaps = 1/131 (0%)
 Frame = -1

Query: 390 DARLRSMAVRMQTKFDKYW-DMDKINILLYVGVVLDPRFKMKYVSYSFKQLYEETKANDE 214
           D  L  MA  M+ K+DKYW ++ + N+LLYV VVLDPR+K+K+V + F QLY++  A D 
Sbjct: 323 DLLLSDMAQNMKAKYDKYWGNLKRSNLLLYVVVVLDPRYKLKFVQFCFDQLYDKEVAKDM 382

Query: 213 AKKVKDALVALYEWYVGHYPSSNQPPIDANVSQAASRMDVDDDEQDPSMLAAEFQ*HLLE 34
           + +V D L  LY+ Y   Y  +       ++ + +   + +  EQD       F  HL E
Sbjct: 383 STRVVDVLRKLYDEYRLLYFHNEV----CDLEEFSQPKESELGEQDDLNFVYTFTRHLYE 438

Query: 33  EDNLQNKSEVE 1
           E N+++KSE++
Sbjct: 439 EHNVESKSELD 449


>ref|XP_002460070.1| hypothetical protein SORBIDRAFT_02g022302 [Sorghum bicolor]
           gi|241923447|gb|EER96591.1| hypothetical protein
           SORBIDRAFT_02g022302 [Sorghum bicolor]
          Length = 271

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 46/133 (34%), Positives = 75/133 (56%), Gaps = 8/133 (6%)
 Frame = -1

Query: 402 SLMEDARLRSMAVRMQTKFDKYWDMD-KINILLYVGVVLDPRFKMKYVSYSFKQLYEETK 226
           +L +D  L SMA  M+ KF KYW+ +  +N LL++ V+LDPR+K+KY+++  + LY   K
Sbjct: 146 ALADDPILSSMASFMKLKFQKYWEEEGNLNYLLFIAVILDPRYKLKYLTFCLEILYGSDK 205

Query: 225 ANDEAKKVKDALVALYEWYV-------GHYPSSNQPPIDANVSQAASRMDVDDDEQDPSM 67
               +++ + AL  L+ +Y            SSNQ  I  NV++       DD+E    M
Sbjct: 206 GKQLSERTQLALNELFGFYTQTIRTPSSSSRSSNQALIHINVNE-------DDEENPWDM 258

Query: 66  LAAEFQ*HLLEED 28
           LA++F+ H+ E +
Sbjct: 259 LASQFEQHMEENE 271


>ref|XP_003575784.1| PREDICTED: uncharacterized protein LOC100844492 [Brachypodium
            distachyon]
          Length = 1036

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 47/145 (32%), Positives = 71/145 (48%), Gaps = 15/145 (10%)
 Frame = -1

Query: 393  EDARLRSMAVRMQTKFDKYWDM---------------DKINILLYVGVVLDPRFKMKYVS 259
            ED  LR+M   M  KFDKYWD                +K N ++ +  +LDPRFK++ V 
Sbjct: 780  EDEGLRAMGKAMLDKFDKYWDSSYAEEQLYDNGRDRRNKKNNVMVIACILDPRFKLRLVE 839

Query: 258  YSFKQLYEETKANDEAKKVKDALVALYEWYVGHYPSSNQPPIDANVSQAASRMDVDDDEQ 79
            Y FK+LY E K ++EAK +K    AL+  Y   +   N    +   + ++SR        
Sbjct: 840  YCFKELYGENKGSNEAKDIKTEFSALFSKYEMQHREKNGESNETRQTASSSR-----STT 894

Query: 78   DPSMLAAEFQ*HLLEEDNLQNKSEV 4
              S L++ F+  L E +   +KSE+
Sbjct: 895  TMSTLSSGFKSFLAETNANPSKSEL 919


>gb|ADN33674.1| transposase [Cucumis melo subsp. melo]
          Length = 347

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 38/82 (46%), Positives = 52/82 (63%), Gaps = 3/82 (3%)
 Frame = -1

Query: 405 FSLMEDARLRSMAVRMQTKFDKYWDM---DKINILLYVGVVLDPRFKMKYVSYSFKQLYE 235
           +S  E+A L  M + MQTKF+KYW +   +K N+LLYV VVLDPR+K+ YV+Y F +  E
Sbjct: 91  YSSYENALLSQMTLSMQTKFNKYWGITTSEKTNLLLYVSVVLDPRYKLAYVNYCFNEFLE 150

Query: 234 ETKANDEAKKVKDALVALYEWY 169
           E  A     KV++A   L + Y
Sbjct: 151 EDCAKIWTNKVEEAFRRLCDDY 172


>gb|ACX85638.1| putative transposase [Cucumis melo]
          Length = 680

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 38/82 (46%), Positives = 52/82 (63%), Gaps = 3/82 (3%)
 Frame = -1

Query: 405 FSLMEDARLRSMAVRMQTKFDKYWDM---DKINILLYVGVVLDPRFKMKYVSYSFKQLYE 235
           +S  E+A L  M + MQTKF+KYW +   +K N+LLYV VVLDPR+K+ YV+Y F +  E
Sbjct: 424 YSSYENALLSQMTLSMQTKFNKYWGITTSEKTNLLLYVSVVLDPRYKLAYVNYCFNEFLE 483

Query: 234 ETKANDEAKKVKDALVALYEWY 169
           E  A     KV++A   L + Y
Sbjct: 484 EDCAKIWTNKVEEAFRRLCDDY 505


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