BLASTX nr result

ID: Coptis21_contig00028874 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00028874
         (242 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002301659.1| predicted protein [Populus trichocarpa] gi|2...    56   3e-06

>ref|XP_002301659.1| predicted protein [Populus trichocarpa] gi|222843385|gb|EEE80932.1|
           predicted protein [Populus trichocarpa]
          Length = 254

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 28/48 (58%), Positives = 34/48 (70%)
 Frame = +1

Query: 7   MSVDFQHLISLQDLELVWLPQLTSLPEEIQHARRLQTLEIEGCKNLRK 150
           +S   QHL  L+DLELV  P+L SLPE IQH   L++L IEGC NL+K
Sbjct: 185 LSEGVQHLTVLEDLELVNCPELNSLPESIQHLTSLRSLFIEGCPNLKK 232


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