BLASTX nr result

ID: Coptis21_contig00028873 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00028873
         (903 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI22085.3| unnamed protein product [Vitis vinifera]              269   8e-70
ref|XP_003545150.1| PREDICTED: LOW QUALITY PROTEIN: anaphase-pro...   255   9e-66
ref|XP_004137248.1| PREDICTED: anaphase-promoting complex subuni...   249   6e-64
ref|XP_002532792.1| conserved hypothetical protein [Ricinus comm...   243   4e-62
ref|XP_002892351.1| binding protein [Arabidopsis lyrata subsp. l...   234   3e-59

>emb|CBI22085.3| unnamed protein product [Vitis vinifera]
          Length = 921

 Score =  269 bits (687), Expect = 8e-70
 Identities = 148/264 (56%), Positives = 178/264 (67%)
 Frame = -1

Query: 903  LTAICNLLXXXXXXXXXXXXXXXXSPVTSFASSLAIQQQLLELLTRSLKRAENLKLTRLV 724
            L AICNLL                 PVTS  +SL+IQQQL  LL RSLKRA+ LKL RLV
Sbjct: 413  LAAICNLLSAIGISSTTEILGSSYGPVTSIGTSLSIQQQLFVLLRRSLKRADGLKLKRLV 472

Query: 723  ASNRLAMAKFELLHVKRSLLSFGPKSSTKLRTCPSNVIKELRLSSYLLXXXXXXXXXXXX 544
            ASNRLAMAKF L HV+R LLSFGPK+S KL+TCP NV KELRLSS+L+            
Sbjct: 473  ASNRLAMAKFGLTHVQRPLLSFGPKASMKLKTCPVNVCKELRLSSHLISEFSTESSIMIT 532

Query: 543  XXAFSSAWLKNLRKPNSSSVLLQGNELGSGCESFHFGGXXXXXXXXXXXXXXXXXXLRAT 364
               FS+AWLKNL+KP  S VL   N  G+   +FHF                    LRAT
Sbjct: 533  DGVFSTAWLKNLQKPMGSLVLSLENASGANSNAFHFCAQPNSIPGSVLQLLGSSYLLRAT 592

Query: 363  AWEHYGSSSLARLNALIHSTCFADASSSADGELAYIKLIRHLSIFKGHKEAFSALKVAED 184
            AWE YGS+ LAR+NAL+++TCF++ASSSAD  LAY KLI+HL++FKGH+EAF+ALK+ E+
Sbjct: 593  AWEIYGSAPLARINALVYATCFSNASSSADVALAYTKLIQHLAVFKGHREAFAALKLVEE 652

Query: 183  KFLSVTKSGIQMLKLQLLHDRALH 112
            KF S++KS I +LKLQLLH+RALH
Sbjct: 653  KFCSISKSRILLLKLQLLHERALH 676


>ref|XP_003545150.1| PREDICTED: LOW QUALITY PROTEIN: anaphase-promoting complex subunit
            5-like [Glycine max]
          Length = 922

 Score =  255 bits (652), Expect = 9e-66
 Identities = 146/265 (55%), Positives = 175/265 (66%)
 Frame = -1

Query: 903  LTAICNLLXXXXXXXXXXXXXXXXSPVTSFASSLAIQQQLLELLTRSLKRAENLKLTRLV 724
            L AI NLL                SP TS   SL++QQQL  LL  SLKRAE+LKL RLV
Sbjct: 414  LAAISNLLFENGISSTAATLGSSYSPFTSIGISLSVQQQLFVLLRGSLKRAESLKLKRLV 473

Query: 723  ASNRLAMAKFELLHVKRSLLSFGPKSSTKLRTCPSNVIKELRLSSYLLXXXXXXXXXXXX 544
            ASN LAMAKF+L HV+R LLSFGPK+S KL TCP NV KE+RLSS+L+            
Sbjct: 474  ASNHLAMAKFDLTHVQRPLLSFGPKTSMKLSTCPVNVCKEIRLSSHLISDFSYESSAMTI 533

Query: 543  XXAFSSAWLKNLRKPNSSSVLLQGNELGSGCESFHFGGXXXXXXXXXXXXXXXXXXLRAT 364
              AFS+AWL+NL+KP  S VL Q N  G+   +  F                    LRAT
Sbjct: 534  DGAFSTAWLRNLQKPTGSLVLCQENGSGNSSNASQFIAQPTSIPGSVLQVLGLSYILRAT 593

Query: 363  AWEHYGSSSLARLNALIHSTCFADASSSADGELAYIKLIRHLSIFKGHKEAFSALKVAED 184
            AWE YGSS L+R+NAL+H+T FADASSS+D  LAY+KLI+HL++ KG+KEAF ALK+AE+
Sbjct: 594  AWELYGSSPLSRINALVHATRFADASSSSDAALAYVKLIQHLAVSKGYKEAFFALKIAEE 653

Query: 183  KFLSVTKSGIQMLKLQLLHDRALHR 109
            KFLSV+KS I +LKLQLLH+ ALHR
Sbjct: 654  KFLSVSKSQILLLKLQLLHEHALHR 678


>ref|XP_004137248.1| PREDICTED: anaphase-promoting complex subunit 5-like [Cucumis
            sativus] gi|449483128|ref|XP_004156500.1| PREDICTED:
            anaphase-promoting complex subunit 5-like [Cucumis
            sativus]
          Length = 917

 Score =  249 bits (636), Expect = 6e-64
 Identities = 139/265 (52%), Positives = 177/265 (66%)
 Frame = -1

Query: 903  LTAICNLLXXXXXXXXXXXXXXXXSPVTSFASSLAIQQQLLELLTRSLKRAENLKLTRLV 724
            L AI NLL                SP+ S   SL++QQQL  LLT SL+RAE+LKL RLV
Sbjct: 409  LAAIGNLLSESGFSRTSGILGSSYSPLLSMGISLSVQQQLFVLLTESLRRAESLKLKRLV 468

Query: 723  ASNRLAMAKFELLHVKRSLLSFGPKSSTKLRTCPSNVIKELRLSSYLLXXXXXXXXXXXX 544
            ASN LAMAKF L+HV+R LLSFGP++S KLRT P +V KELRLS++L+            
Sbjct: 469  ASNHLAMAKFHLMHVQRPLLSFGPRASAKLRTSPISVCKELRLSTHLICQYGTESSTKTT 528

Query: 543  XXAFSSAWLKNLRKPNSSSVLLQGNELGSGCESFHFGGXXXXXXXXXXXXXXXXXXLRAT 364
              +FS+AWL NL+KP  S VL + NE G+      F                    LRAT
Sbjct: 529  DGSFSTAWLTNLQKPAGSHVLCRDNESGNNSSELPFFAQPTSIPGSVLQLLGSSYLLRAT 588

Query: 363  AWEHYGSSSLARLNALIHSTCFADASSSADGELAYIKLIRHLSIFKGHKEAFSALKVAED 184
            A+E YGS+ LAR+NA++++TCFAD SSS+D  LAY+KLI+HL+IFKG+KEAFSALK+AE+
Sbjct: 589  AFEIYGSAPLARINAILYATCFADTSSSSDASLAYVKLIQHLAIFKGYKEAFSALKIAEE 648

Query: 183  KFLSVTKSGIQMLKLQLLHDRALHR 109
            +FLS++KS I +LKLQL+H+ ALHR
Sbjct: 649  RFLSLSKSRILLLKLQLVHEHALHR 673


>ref|XP_002532792.1| conserved hypothetical protein [Ricinus communis]
            gi|223527462|gb|EEF29594.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 917

 Score =  243 bits (620), Expect = 4e-62
 Identities = 137/265 (51%), Positives = 172/265 (64%)
 Frame = -1

Query: 903  LTAICNLLXXXXXXXXXXXXXXXXSPVTSFASSLAIQQQLLELLTRSLKRAENLKLTRLV 724
            L AICNLL                SP+TS   S+++ QQL  LL  SLKRAE+LKL RLV
Sbjct: 408  LAAICNLLSEICSSTTAGILGTSYSPITSMGISVSVAQQLFVLLRESLKRAESLKLKRLV 467

Query: 723  ASNRLAMAKFELLHVKRSLLSFGPKSSTKLRTCPSNVIKELRLSSYLLXXXXXXXXXXXX 544
            ASN LAMA+F+++HV+R LLSFGPK S KL+T P NV K+LRL SYL+            
Sbjct: 468  ASNHLAMARFDMMHVQRPLLSFGPKVSMKLKTSPINVCKKLRLCSYLISEFASEISTSTT 527

Query: 543  XXAFSSAWLKNLRKPNSSSVLLQGNELGSGCESFHFGGXXXXXXXXXXXXXXXXXXLRAT 364
              AFS+ WLKNL KP  S VL Q N  G    +  F                    LRAT
Sbjct: 528  DGAFSTTWLKNLTKPMGSLVLTQENGSGENFHALQFCMQPSSIPRSVLQLLGSSYLLRAT 587

Query: 363  AWEHYGSSSLARLNALIHSTCFADASSSADGELAYIKLIRHLSIFKGHKEAFSALKVAED 184
            AWE YGS+ L+R+NAL+++TCF D+SSS+D  L + KLI++L+ F+G+KEAFSALKVAE+
Sbjct: 588  AWETYGSAPLSRINALVYATCFIDSSSSSDAALVHAKLIQNLAAFQGYKEAFSALKVAEE 647

Query: 183  KFLSVTKSGIQMLKLQLLHDRALHR 109
            KFLSV++S + +LKLQLLH+RALHR
Sbjct: 648  KFLSVSRSVLLLLKLQLLHERALHR 672


>ref|XP_002892351.1| binding protein [Arabidopsis lyrata subsp. lyrata]
            gi|297338193|gb|EFH68610.1| binding protein [Arabidopsis
            lyrata subsp. lyrata]
          Length = 916

 Score =  234 bits (596), Expect = 3e-59
 Identities = 129/264 (48%), Positives = 175/264 (66%)
 Frame = -1

Query: 903  LTAICNLLXXXXXXXXXXXXXXXXSPVTSFASSLAIQQQLLELLTRSLKRAENLKLTRLV 724
            L A+ NLL                SPVTS ASSL++QQ++  LL  SL+RA++LKL RLV
Sbjct: 411  LAAMSNLLSEMGIASTTCVLGSSYSPVTSTASSLSVQQRVYILLKESLRRADSLKLRRLV 470

Query: 723  ASNRLAMAKFELLHVKRSLLSFGPKSSTKLRTCPSNVIKELRLSSYLLXXXXXXXXXXXX 544
            ASN LAMAKFEL+HV+R LLSFGPK+ST  +TCP +V KE+RL ++L+            
Sbjct: 471  ASNHLAMAKFELMHVQRPLLSFGPKASTHHKTCPVSVCKEIRLGAHLISDFSSESSTMTI 530

Query: 543  XXAFSSAWLKNLRKPNSSSVLLQGNELGSGCESFHFGGXXXXXXXXXXXXXXXXXXLRAT 364
              + SSAWLK+L+KP    V+ Q +        F F                    LRAT
Sbjct: 531  DGSLSSAWLKDLQKPWGPPVISQDSGSRKSSTFFQFCDHLVSIPGSVAHLIGASYLLRAT 590

Query: 363  AWEHYGSSSLARLNALIHSTCFADASSSADGELAYIKLIRHLSIFKGHKEAFSALKVAED 184
            +WE +GS+ +AR+N L+++T F D+SSS+D ELAY+KLI+HL+++KG+K+AF+ALK+AE+
Sbjct: 591  SWELFGSAPMARMNTLVYATLFGDSSSSSDAELAYLKLIQHLALYKGYKDAFAALKIAEE 650

Query: 183  KFLSVTKSGIQMLKLQLLHDRALH 112
            KFL+V+KS I +LKLQLLH+RALH
Sbjct: 651  KFLTVSKSKILLLKLQLLHERALH 674


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