BLASTX nr result

ID: Coptis21_contig00028867 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00028867
         (299 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278390.1| PREDICTED: pentatricopeptide repeat-containi...    85   5e-15
emb|CAN67320.1| hypothetical protein VITISV_039345 [Vitis vinifera]    85   5e-15
ref|XP_002312938.1| predicted protein [Populus trichocarpa] gi|2...    78   7e-13
ref|XP_004156246.1| PREDICTED: uncharacterized protein LOC101223...    74   9e-12
ref|XP_004141623.1| PREDICTED: uncharacterized protein LOC101204...    74   9e-12

>ref|XP_002278390.1| PREDICTED: pentatricopeptide repeat-containing protein At2g17033
           [Vitis vinifera] gi|297744557|emb|CBI37819.3| unnamed
           protein product [Vitis vinifera]
          Length = 435

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 45/98 (45%), Positives = 63/98 (64%)
 Frame = -1

Query: 296 RLKFRERDVALFYCDLIESLSKHGLNEAVFDHYARLKQVLSTGSCSLNTSLNRKALQCMI 117
           +L  RERD+  FYC+LI+S SKH  N+ VFD  +RL +++S  S   +  +  +A + MI
Sbjct: 126 KLGSRERDLVSFYCNLIDSHSKHSSNQGVFDVISRLSRIVSESS---SVYVKERAYKSMI 182

Query: 116 NALCTLDLAHNAEKTMGEMRNAGLKPSKFEFRSIVLAY 3
           ++LC + L   AE  + EMR  GLKPS FEFRS+V  Y
Sbjct: 183 SSLCAVGLPLEAENLIEEMRVKGLKPSVFEFRSVVYGY 220


>emb|CAN67320.1| hypothetical protein VITISV_039345 [Vitis vinifera]
          Length = 371

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 45/98 (45%), Positives = 63/98 (64%)
 Frame = -1

Query: 296 RLKFRERDVALFYCDLIESLSKHGLNEAVFDHYARLKQVLSTGSCSLNTSLNRKALQCMI 117
           +L  RERD+  FYC+LI+S SKH  N+ VFD  +RL +++S  S   +  +  +A + MI
Sbjct: 62  KLGSRERDLVSFYCNLIDSHSKHSSNQGVFDVISRLSRIVSESS---SVYVKERAYKSMI 118

Query: 116 NALCTLDLAHNAEKTMGEMRNAGLKPSKFEFRSIVLAY 3
           ++LC + L   AE  + EMR  GLKPS FEFRS+V  Y
Sbjct: 119 SSLCAVGLPLEAENLIEEMRVKGLKPSVFEFRSVVYGY 156


>ref|XP_002312938.1| predicted protein [Populus trichocarpa] gi|222849346|gb|EEE86893.1|
           predicted protein [Populus trichocarpa]
          Length = 473

 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 40/98 (40%), Positives = 58/98 (59%)
 Frame = -1

Query: 296 RLKFRERDVALFYCDLIESLSKHGLNEAVFDHYARLKQVLSTGSCSLNTSLNRKALQCMI 117
           RL+F+ER++ LFYC+LI   SKH       D Y+RL Q +S  +   +  + ++  + MI
Sbjct: 163 RLQFKERELVLFYCNLIGFNSKHNWVRGFDDSYSRLNQFVSDSN---SVYVKKQGYKAMI 219

Query: 116 NALCTLDLAHNAEKTMGEMRNAGLKPSKFEFRSIVLAY 3
           + LC +  A  AE  +GEMR  GLKP  FEFR ++  Y
Sbjct: 220 SGLCEMGRAREAEDLIGEMRERGLKPKLFEFRCVLYGY 257


>ref|XP_004156246.1| PREDICTED: uncharacterized protein LOC101223617 [Cucumis sativus]
          Length = 1296

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 37/98 (37%), Positives = 58/98 (59%)
 Frame = -1

Query: 296 RLKFRERDVALFYCDLIESLSKHGLNEAVFDHYARLKQVLSTGSCSLNTSLNRKALQCMI 117
           +L  +ER +  FY  L+ES SKHG      D Y+RL ++L     S +  + R+A + M+
Sbjct: 151 KLGSQERKLVNFYSQLVESQSKHGFERGFVDSYSRLLELLYN---SPSVYVKRRAYESMV 207

Query: 116 NALCTLDLAHNAEKTMGEMRNAGLKPSKFEFRSIVLAY 3
             LC++   H AE  + EMR+ G+ P+ +E+RSI+ AY
Sbjct: 208 TGLCSMKRPHEAENLVKEMRSKGITPTAYEYRSIIYAY 245


>ref|XP_004141623.1| PREDICTED: uncharacterized protein LOC101204365 [Cucumis sativus]
          Length = 1913

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 37/98 (37%), Positives = 58/98 (59%)
 Frame = -1

Query: 296 RLKFRERDVALFYCDLIESLSKHGLNEAVFDHYARLKQVLSTGSCSLNTSLNRKALQCMI 117
           +L  +ER +  FY  L+ES SKHG      D Y+RL ++L     S +  + R+A + M+
Sbjct: 151 KLGSQERKLVNFYSQLVESQSKHGFERGFVDSYSRLLELLYN---SPSVYVKRRAYESMV 207

Query: 116 NALCTLDLAHNAEKTMGEMRNAGLKPSKFEFRSIVLAY 3
             LC++   H AE  + EMR+ G+ P+ +E+RSI+ AY
Sbjct: 208 TGLCSMKRPHEAENLVKEMRSKGITPTAYEYRSIIYAY 245


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