BLASTX nr result

ID: Coptis21_contig00028850 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00028850
         (770 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271840.2| PREDICTED: ubiquitin carboxyl-terminal hydro...   285   8e-75
emb|CBI23999.3| unnamed protein product [Vitis vinifera]              285   8e-75
emb|CAN78307.1| hypothetical protein VITISV_005598 [Vitis vinifera]   275   1e-71
ref|XP_002515370.1| cysteine-type endopeptidase, putative [Ricin...   271   9e-71
ref|XP_003545417.1| PREDICTED: ubiquitin carboxyl-terminal hydro...   266   2e-69

>ref|XP_002271840.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 19-like [Vitis
           vinifera]
          Length = 940

 Score =  285 bits (729), Expect = 8e-75
 Identities = 130/207 (62%), Positives = 157/207 (75%), Gaps = 12/207 (5%)
 Frame = -3

Query: 585 SKRCSGCKAVMYCSHTCQLEHWRSSHRQKCKELRKFGGLSAKSDVSSIGGKASGCDAKST 406
           +K+CSGCKAV YCS TCQ  HW+S H+ KCK+ +  G  +     +  G KASG    ++
Sbjct: 95  TKKCSGCKAVRYCSQTCQATHWKSGHKTKCKDFQLSGKANLADSTTHSGRKASGVGVNNS 154

Query: 405 KEFPLI------------KKVLFPYEEFVKLFNWNDVRFPPCGLLNCGNSCYANVVLQCL 262
               L+            K++LFPY+EFV+ FNW+   FPPCGL+NCGNSC+ANVVLQCL
Sbjct: 155 NGIALVPSSGTSKILKQSKEILFPYDEFVEFFNWDKPGFPPCGLINCGNSCFANVVLQCL 214

Query: 261 SCTQPLVAYMLKIGHKRKCRRNDWCFLCELEIHVERARCSWQPFSPTNILSRLPNIGGNL 82
           + T+PLVAY+L+ GH+R+CRRNDWCFLCE ++HVERA  S QPFSP NILSRLP+IGGNL
Sbjct: 215 AYTRPLVAYLLEKGHRRQCRRNDWCFLCEFQVHVERASHSPQPFSPINILSRLPSIGGNL 274

Query: 81  GYGKQEDAHEFMRFAIDTMQSVCLDEF 1
           GYGKQEDAHEFMRFAIDTMQSVCLDEF
Sbjct: 275 GYGKQEDAHEFMRFAIDTMQSVCLDEF 301


>emb|CBI23999.3| unnamed protein product [Vitis vinifera]
          Length = 892

 Score =  285 bits (729), Expect = 8e-75
 Identities = 130/207 (62%), Positives = 157/207 (75%), Gaps = 12/207 (5%)
 Frame = -3

Query: 585 SKRCSGCKAVMYCSHTCQLEHWRSSHRQKCKELRKFGGLSAKSDVSSIGGKASGCDAKST 406
           +K+CSGCKAV YCS TCQ  HW+S H+ KCK+ +  G  +     +  G KASG    ++
Sbjct: 19  TKKCSGCKAVRYCSQTCQATHWKSGHKTKCKDFQLSGKANLADSTTHSGRKASGVGVNNS 78

Query: 405 KEFPLI------------KKVLFPYEEFVKLFNWNDVRFPPCGLLNCGNSCYANVVLQCL 262
               L+            K++LFPY+EFV+ FNW+   FPPCGL+NCGNSC+ANVVLQCL
Sbjct: 79  NGIALVPSSGTSKILKQSKEILFPYDEFVEFFNWDKPGFPPCGLINCGNSCFANVVLQCL 138

Query: 261 SCTQPLVAYMLKIGHKRKCRRNDWCFLCELEIHVERARCSWQPFSPTNILSRLPNIGGNL 82
           + T+PLVAY+L+ GH+R+CRRNDWCFLCE ++HVERA  S QPFSP NILSRLP+IGGNL
Sbjct: 139 AYTRPLVAYLLEKGHRRQCRRNDWCFLCEFQVHVERASHSPQPFSPINILSRLPSIGGNL 198

Query: 81  GYGKQEDAHEFMRFAIDTMQSVCLDEF 1
           GYGKQEDAHEFMRFAIDTMQSVCLDEF
Sbjct: 199 GYGKQEDAHEFMRFAIDTMQSVCLDEF 225


>emb|CAN78307.1| hypothetical protein VITISV_005598 [Vitis vinifera]
          Length = 494

 Score =  275 bits (702), Expect = 1e-71
 Identities = 128/222 (57%), Positives = 155/222 (69%), Gaps = 27/222 (12%)
 Frame = -3

Query: 585 SKRCSGCKAVMYCSHTCQLEHWRSSHRQKCKELRKFGGLSAKSDVSSIGGKASGCDAKST 406
           +K+CSGCKAV YCS TCQ  HW+S H+ KCK+ +  G  +     +  G KASG    ++
Sbjct: 98  TKKCSGCKAVRYCSQTCQATHWKSGHKTKCKDFQLSGKANLADSTTHSGRKASGVGVNNS 157

Query: 405 KEFPLIK---------------------------KVLFPYEEFVKLFNWNDVRFPPCGLL 307
               L+                            ++LFPY+EFV+ FNW+   FPPCGL+
Sbjct: 158 NGIALVPSSGTSKILKQSKEVTTLSEISNAYLYFQILFPYDEFVEFFNWDKPGFPPCGLI 217

Query: 306 NCGNSCYANVVLQCLSCTQPLVAYMLKIGHKRKCRRNDWCFLCELEIHVERARCSWQPFS 127
           NCGNSC+ANVVLQCL+ T+PLVAY+L+ GH+R+CRRNDWCFLCE ++HVERA  S  PFS
Sbjct: 218 NCGNSCFANVVLQCLAYTRPLVAYLLEKGHRRQCRRNDWCFLCEFQVHVERASHSPXPFS 277

Query: 126 PTNILSRLPNIGGNLGYGKQEDAHEFMRFAIDTMQSVCLDEF 1
           P NILSRLP+IGGNLGYGKQEDAHEFMRFAIDTMQSVCLDEF
Sbjct: 278 PINILSRLPSIGGNLGYGKQEDAHEFMRFAIDTMQSVCLDEF 319


>ref|XP_002515370.1| cysteine-type endopeptidase, putative [Ricinus communis]
           gi|223545314|gb|EEF46819.1| cysteine-type endopeptidase,
           putative [Ricinus communis]
          Length = 632

 Score =  271 bits (694), Expect = 9e-71
 Identities = 132/205 (64%), Positives = 159/205 (77%), Gaps = 10/205 (4%)
 Frame = -3

Query: 585 SKRCSGCKAVMYCSHTCQLEHWRSSHRQKCKELRKFGGL-SAKSD----VSSIGGKASGC 421
           +K+CS CK+V YCS  CQ  HW+S H+ KCK L +   + +AK++     S +GG+ S  
Sbjct: 76  TKKCSRCKSVRYCSTECQEVHWKSGHKSKCKNLVRVNSVENAKTNFGVKASGLGGRISSG 135

Query: 420 DA--KSTKEFPLIKK---VLFPYEEFVKLFNWNDVRFPPCGLLNCGNSCYANVVLQCLSC 256
            A   S     LIKK   VLFPY++F+KL+NWN   FPPCGLLNCGNSC+ANVVLQCL+ 
Sbjct: 136 IALVPSNGITKLIKKPTEVLFPYDKFIKLYNWNKGAFPPCGLLNCGNSCFANVVLQCLTF 195

Query: 255 TQPLVAYMLKIGHKRKCRRNDWCFLCELEIHVERARCSWQPFSPTNILSRLPNIGGNLGY 76
           T+PLVAY+L+ GH+R+CRRNDWCFLCE ++HVERA  S  PFSP +ILSRLPNIGGNLGY
Sbjct: 196 TRPLVAYLLEEGHQRECRRNDWCFLCEFQVHVERASKSSHPFSPMSILSRLPNIGGNLGY 255

Query: 75  GKQEDAHEFMRFAIDTMQSVCLDEF 1
           GKQEDAHEFMRFAIDTMQSVCLDE+
Sbjct: 256 GKQEDAHEFMRFAIDTMQSVCLDEY 280


>ref|XP_003545417.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 19-like [Glycine
           max]
          Length = 729

 Score =  266 bits (679), Expect(2) = 2e-69
 Identities = 131/210 (62%), Positives = 148/210 (70%), Gaps = 16/210 (7%)
 Frame = -3

Query: 582 KRCSGCKAVMYCSHTCQLEHWRSSHRQKCKELRKFGGLS-AKSDVSSIGGKASGCDAKST 406
           K+CS CKAV YCS  CQ  HW S H+  CK+ R+    S A++ V + G KAS    KS 
Sbjct: 79  KKCSRCKAVRYCSQACQQSHWMSGHKTVCKDFRETSARSSAQNGVINRGFKASAAGGKSL 138

Query: 405 KEFPLI---------------KKVLFPYEEFVKLFNWNDVRFPPCGLLNCGNSCYANVVL 271
               LI               K VLF Y+EFVK FNW+   FPPCGLLNCGNSC+ANVVL
Sbjct: 139 STIALIPGCGAGAISRPIKQAKDVLFSYDEFVKFFNWDKPGFPPCGLLNCGNSCFANVVL 198

Query: 270 QCLSCTQPLVAYMLKIGHKRKCRRNDWCFLCELEIHVERARCSWQPFSPTNILSRLPNIG 91
           QCLS T+PLVAY+L+ GH+R+C  NDWCFLCE E HVER R S Q FSP NILSRLPNIG
Sbjct: 199 QCLSFTKPLVAYLLEKGHRRECSCNDWCFLCEFENHVERTRLSSQAFSPMNILSRLPNIG 258

Query: 90  GNLGYGKQEDAHEFMRFAIDTMQSVCLDEF 1
           G LGYG+QEDAHEFMRF+IDTMQSVCLDEF
Sbjct: 259 GTLGYGRQEDAHEFMRFSIDTMQSVCLDEF 288



 Score = 23.1 bits (48), Expect(2) = 2e-69
 Identities = 10/13 (76%), Positives = 10/13 (76%)
 Frame = -1

Query: 725 KTTASSYFLGDAN 687
           K TAS YFL DAN
Sbjct: 33  KVTASKYFLVDAN 45


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