BLASTX nr result

ID: Coptis21_contig00028841 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00028841
         (298 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK93168.1| unknown [Populus trichocarpa]                          130   1e-28
ref|XP_002299355.1| predicted protein [Populus trichocarpa] gi|2...   126   2e-27
ref|XP_002284696.1| PREDICTED: random slug protein 5 [Vitis vini...   119   3e-25
ref|XP_002303745.1| predicted protein [Populus trichocarpa] gi|2...   118   4e-25
ref|XP_002512674.1| aspartate semialdehyde dehydrogenase, putati...   117   7e-25

>gb|ABK93168.1| unknown [Populus trichocarpa]
          Length = 255

 Score =  130 bits (326), Expect = 1e-28
 Identities = 59/96 (61%), Positives = 80/96 (83%)
 Frame = -3

Query: 293 TKEDNRMNKCNAIEQQELRVMRSFVESQDPASKEVDDVMLRRFLRARDLHVKKASALFLK 114
           T+E+    + N IEQ+++R+MR+FVE +DP+ KEVDD+M+RRFLRAR+L ++KAS LFLK
Sbjct: 14  TEEEENGTEINEIEQRKVRLMRAFVEREDPSVKEVDDLMIRRFLRARELDIEKASTLFLK 73

Query: 113 YLSWRQEFVPKGSISESDIPNELAQKKMFLQGYDKQ 6
           YLSWR+  +P G IS S+IPNELAQ K+F+QG+DKQ
Sbjct: 74  YLSWRRSIIPNGFISSSEIPNELAQNKLFMQGFDKQ 109


>ref|XP_002299355.1| predicted protein [Populus trichocarpa] gi|222846613|gb|EEE84160.1|
           predicted protein [Populus trichocarpa]
          Length = 231

 Score =  126 bits (316), Expect = 2e-27
 Identities = 57/86 (66%), Positives = 75/86 (87%)
 Frame = -3

Query: 263 NAIEQQELRVMRSFVESQDPASKEVDDVMLRRFLRARDLHVKKASALFLKYLSWRQEFVP 84
           N IEQ+++R+MR+FVE +DP+ KEVDD+M+RRFLRAR+L ++KAS LFLKYLSWR+  +P
Sbjct: 1   NEIEQRKVRLMRAFVEREDPSVKEVDDLMIRRFLRARELDIEKASTLFLKYLSWRRSIIP 60

Query: 83  KGSISESDIPNELAQKKMFLQGYDKQ 6
            G IS S+IPNELAQ K+F+QG+DKQ
Sbjct: 61  NGFISSSEIPNELAQNKLFMQGFDKQ 86


>ref|XP_002284696.1| PREDICTED: random slug protein 5 [Vitis vinifera]
           gi|147860850|emb|CAN83160.1| hypothetical protein
           VITISV_022555 [Vitis vinifera]
           gi|297734520|emb|CBI15767.3| unnamed protein product
           [Vitis vinifera]
          Length = 256

 Score =  119 bits (298), Expect = 3e-25
 Identities = 60/102 (58%), Positives = 77/102 (75%), Gaps = 5/102 (4%)
 Frame = -3

Query: 296 ETKEDNRMNKCNAIEQQELRVMRSFVESQDPASKE-----VDDVMLRRFLRARDLHVKKA 132
           E ++     K N +EQ ++ +MR++VESQDP+S++      DD+M+RRFLRARDL V+KA
Sbjct: 9   EARDGEGSMKINEMEQTKVSLMRTYVESQDPSSRDPSSQKADDLMIRRFLRARDLDVEKA 68

Query: 131 SALFLKYLSWRQEFVPKGSISESDIPNELAQKKMFLQGYDKQ 6
           SALFL+YL WRQ FVP GSIS S + NE+AQ KMFLQG DKQ
Sbjct: 69  SALFLRYLKWRQTFVPNGSISLSQVRNEVAQNKMFLQGLDKQ 110


>ref|XP_002303745.1| predicted protein [Populus trichocarpa] gi|222841177|gb|EEE78724.1|
           predicted protein [Populus trichocarpa]
          Length = 230

 Score =  118 bits (296), Expect = 4e-25
 Identities = 55/84 (65%), Positives = 70/84 (83%)
 Frame = -3

Query: 257 IEQQELRVMRSFVESQDPASKEVDDVMLRRFLRARDLHVKKASALFLKYLSWRQEFVPKG 78
           IEQ ++R+MR+FVE +DP+ KEVDD M+RRFLRAR+L ++KAS LF KYLSWR+ F+P G
Sbjct: 2   IEQSKVRLMRAFVEREDPSVKEVDDFMIRRFLRARELDIEKASILFQKYLSWRRSFIPNG 61

Query: 77  SISESDIPNELAQKKMFLQGYDKQ 6
            I+ S+IPNELAQ K F+QG DKQ
Sbjct: 62  FIAPSEIPNELAQNKFFMQGADKQ 85


>ref|XP_002512674.1| aspartate semialdehyde dehydrogenase, putative [Ricinus communis]
           gi|223548635|gb|EEF50126.1| aspartate semialdehyde
           dehydrogenase, putative [Ricinus communis]
          Length = 257

 Score =  117 bits (294), Expect = 7e-25
 Identities = 54/94 (57%), Positives = 74/94 (78%)
 Frame = -3

Query: 287 EDNRMNKCNAIEQQELRVMRSFVESQDPASKEVDDVMLRRFLRARDLHVKKASALFLKYL 108
           E+   +K N IEQQ++ +MR  VE +DP++KEVDD+M+RRFLRAR+  ++KAS L LKYL
Sbjct: 18  ENGEESKSNEIEQQKVHIMRVHVEREDPSAKEVDDLMIRRFLRAREHDIEKASNLLLKYL 77

Query: 107 SWRQEFVPKGSISESDIPNELAQKKMFLQGYDKQ 6
           SWR+ F+P GS+  S+IP ELAQ K+F+QG DK+
Sbjct: 78  SWRRSFIPNGSVYPSEIPKELAQNKLFMQGVDKK 111


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