BLASTX nr result

ID: Coptis21_contig00028839 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00028839
         (842 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266878.1| PREDICTED: uncharacterized protein LOC100255...   162   7e-38
ref|XP_002331820.1| predicted protein [Populus trichocarpa] gi|2...   159   6e-37
ref|XP_002513591.1| conserved hypothetical protein [Ricinus comm...   152   1e-34
ref|NP_001032066.1| uncharacterized protein [Arabidopsis thalian...   146   5e-33
dbj|BAB09784.1| unnamed protein product [Arabidopsis thaliana]        146   5e-33

>ref|XP_002266878.1| PREDICTED: uncharacterized protein LOC100255280 [Vitis vinifera]
            gi|302143706|emb|CBI22567.3| unnamed protein product
            [Vitis vinifera]
          Length = 673

 Score =  162 bits (411), Expect = 7e-38
 Identities = 79/173 (45%), Positives = 116/173 (67%), Gaps = 3/173 (1%)
 Frame = -3

Query: 660  EAEDFVSDCVGESLGRITVSRYSGSGREGNVVGAEYEDDG---ITKLLCEFRKSKGNKLN 490
            E E+  SD  GESLG   ++    SG +G    +E E +G      ++   R++   K  
Sbjct: 499  ETEEIGSDSEGESLGGFIINDSEVSGGDGAYNESEEESNGNVDFVDIISRIRRNSDKKSK 558

Query: 489  WKYEEDMLSSFEEDPLLCMRAVCALYRRHISEENSKSGSLHSDNRGFNKVDAMRGTNLAE 310
            W++E DML++F +DP LCM+AVCALYR+  SEE +   +++S+ RGF++ DA+RGT LAE
Sbjct: 559  WEFEADMLAAFGKDPELCMKAVCALYRQQTSEEKTVKETIYSNQRGFSQCDALRGTTLAE 618

Query: 309  FLMDGNREGDITKSIQELEMYSPKGLEECKRLARWYSKQLFTVYKSKEDAFFL 151
            +L DG+ +GD+ KS+++L+ Y PK LE C+ LA  YSKQLF +Y++KED FFL
Sbjct: 619  YLTDGDPQGDLKKSVKDLQQYHPKALELCRTLATHYSKQLFAIYQNKEDPFFL 671


>ref|XP_002331820.1| predicted protein [Populus trichocarpa] gi|222875058|gb|EEF12189.1|
            predicted protein [Populus trichocarpa]
          Length = 580

 Score =  159 bits (403), Expect = 6e-37
 Identities = 97/228 (42%), Positives = 130/228 (57%), Gaps = 18/228 (7%)
 Frame = -3

Query: 777  VQREEKRSGAKQIPSDQFEISGTSYRNPGSSTADKENKREAEDFVSDCVGESLGRITVS- 601
            ++ EE +  A   PS+    S T+YR  G  T D     E++D  SD  G SL    VS 
Sbjct: 352  LRNEEGKVKASNSPSNT---SKTNYR--GIPTTDDVEDSESDDAGSDSEGGSLDGFIVSD 406

Query: 600  ---------RYSGSGREGNVVGAEY--EDDG------ITKLLCEFRKSKGNKLNWKYEED 472
                       S S  + N V   +   DDG         +L  F++SK +K  W++E D
Sbjct: 407  DTYASDADDTSSESEEKPNDVNDAFGLSDDGSDDDTDFGMILSRFQRSKDHKFKWEFEGD 466

Query: 471  MLSSFEEDPLLCMRAVCALYRRHISEENSKSGSLHSDNRGFNKVDAMRGTNLAEFLMDGN 292
            MLS F +DP LCM+AVCALYR+   EE     +LH + RGF+K DA RG+ LAEFL+DG+
Sbjct: 467  MLSDFGKDPELCMKAVCALYRQQSDEEKLNKETLHGNGRGFSKFDAPRGSKLAEFLIDGD 526

Query: 291  REGDITKSIQELEMYSPKGLEECKRLARWYSKQLFTVYKSKEDAFFLP 148
              GD+ KS+ EL+ Y+ KG+  C++LA  YSKQLF +YK+KED  FLP
Sbjct: 527  PSGDLKKSVLELQAYNSKGVTLCRKLATHYSKQLFQIYKNKEDPLFLP 574


>ref|XP_002513591.1| conserved hypothetical protein [Ricinus communis]
            gi|223547499|gb|EEF48994.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 638

 Score =  152 bits (383), Expect = 1e-34
 Identities = 77/185 (41%), Positives = 116/185 (62%), Gaps = 3/185 (1%)
 Frame = -3

Query: 693  GSSTADKENKREAEDFVSDCVGESLGRITVSRYSGSGREGNVVGAEYEDDG---ITKLLC 523
            G ST D     E+E+  S   GESLG   +    GS  +     ++ + DG     ++L 
Sbjct: 452  GISTTDDVEDSESEELGSGSEGESLGGFIIDNSDGSDADKVSSQSDNKSDGSVDFDEILS 511

Query: 522  EFRKSKGNKLNWKYEEDMLSSFEEDPLLCMRAVCALYRRHISEENSKSGSLHSDNRGFNK 343
            + ++SK +   W+ E DMLS+F +D  LCM+AVCALYR+  ++E     +++++ RGF+K
Sbjct: 512  QLQRSKDHTFKWELEADMLSAFGKDDELCMKAVCALYRQQTADEQLSKETMYNNKRGFSK 571

Query: 342  VDAMRGTNLAEFLMDGNREGDITKSIQELEMYSPKGLEECKRLARWYSKQLFTVYKSKED 163
             DA+RG++LA FL+DG+ +GD+ KS+Q+LE    K ++ C+ LA  YSKQLF +YKSKED
Sbjct: 572  FDALRGSDLARFLIDGDPQGDLKKSVQQLEELGSKAVKLCRTLAARYSKQLFEIYKSKED 631

Query: 162  AFFLP 148
              F P
Sbjct: 632  PLFRP 636


>ref|NP_001032066.1| uncharacterized protein [Arabidopsis thaliana]
           gi|79536815|ref|NP_200134.2| uncharacterized protein
           [Arabidopsis thaliana] gi|186531691|ref|NP_001119424.1|
           uncharacterized protein [Arabidopsis thaliana]
           gi|60547941|gb|AAX23934.1| hypothetical protein
           At5g53220 [Arabidopsis thaliana]
           gi|332008941|gb|AED96324.1| uncharacterized protein
           [Arabidopsis thaliana] gi|332008942|gb|AED96325.1|
           uncharacterized protein [Arabidopsis thaliana]
           gi|332008943|gb|AED96326.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 368

 Score =  146 bits (369), Expect = 5e-33
 Identities = 80/196 (40%), Positives = 116/196 (59%), Gaps = 6/196 (3%)
 Frame = -3

Query: 723 EISGTSYRNPGSSTADKENKREAEDFVSDCVGESLGRITVS---RYSGSGREGNVVGAEY 553
           E+S ++ R  G  T D     E E+  S+  GESL    +           + + +G E 
Sbjct: 167 EVSASTERLVGIPTTDNAEDDETEEEGSESEGESLDGFIIDDDDSQESVSEKSDEIGVEE 226

Query: 552 EDD--GITKLLCEFRKSKG-NKLNWKYEEDMLSSFEEDPLLCMRAVCALYRRHISEENSK 382
            D   G   ++   R+ K   K  W+YE DML+ F +DP LCMRAVC L+R    +E  +
Sbjct: 227 SDGEVGYADVMSRLRREKKPEKRKWEYEADMLADFGKDPELCMRAVCVLFRFQTEDEKVE 286

Query: 381 SGSLHSDNRGFNKVDAMRGTNLAEFLMDGNREGDITKSIQELEMYSPKGLEECKRLARWY 202
             S  S+ RGF+KVDA+RGT++A FL DG+  GD+ KS++EL+++  KG+E+C+ LAR Y
Sbjct: 287 RSSHVSNGRGFSKVDAVRGTSIALFLTDGDSAGDMKKSVEELKVFDFKGVEKCEELARKY 346

Query: 201 SKQLFTVYKSKEDAFF 154
           SKQLF +Y ++ED FF
Sbjct: 347 SKQLFQIYNNREDPFF 362


>dbj|BAB09784.1| unnamed protein product [Arabidopsis thaliana]
          Length = 441

 Score =  146 bits (369), Expect = 5e-33
 Identities = 80/196 (40%), Positives = 116/196 (59%), Gaps = 6/196 (3%)
 Frame = -3

Query: 723 EISGTSYRNPGSSTADKENKREAEDFVSDCVGESLGRITVS---RYSGSGREGNVVGAEY 553
           E+S ++ R  G  T D     E E+  S+  GESL    +           + + +G E 
Sbjct: 240 EVSASTERLVGIPTTDNAEDDETEEEGSESEGESLDGFIIDDDDSQESVSEKSDEIGVEE 299

Query: 552 EDD--GITKLLCEFRKSKG-NKLNWKYEEDMLSSFEEDPLLCMRAVCALYRRHISEENSK 382
            D   G   ++   R+ K   K  W+YE DML+ F +DP LCMRAVC L+R    +E  +
Sbjct: 300 SDGEVGYADVMSRLRREKKPEKRKWEYEADMLADFGKDPELCMRAVCVLFRFQTEDEKVE 359

Query: 381 SGSLHSDNRGFNKVDAMRGTNLAEFLMDGNREGDITKSIQELEMYSPKGLEECKRLARWY 202
             S  S+ RGF+KVDA+RGT++A FL DG+  GD+ KS++EL+++  KG+E+C+ LAR Y
Sbjct: 360 RSSHVSNGRGFSKVDAVRGTSIALFLTDGDSAGDMKKSVEELKVFDFKGVEKCEELARKY 419

Query: 201 SKQLFTVYKSKEDAFF 154
           SKQLF +Y ++ED FF
Sbjct: 420 SKQLFQIYNNREDPFF 435


Top