BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00028838
         (942 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271255.1| PREDICTED: RNA polymerase II subunit A C-ter...   360   3e-97
ref|XP_002515629.1| Protein SSU72, putative [Ricinus communis] g...   356   5e-96
ref|XP_002322116.1| predicted protein [Populus trichocarpa] gi|2...   353   2e-95
ref|NP_001238070.1| uncharacterized protein LOC100306388 [Glycin...   347   3e-93
ref|XP_004137380.1| PREDICTED: RNA polymerase II subunit A C-ter...   340   2e-91

>ref|XP_002271255.1| PREDICTED: RNA polymerase II subunit A C-terminal domain
           phosphatase SSU72 [Vitis vinifera]
           gi|296083946|emb|CBI24334.3| unnamed protein product
           [Vitis vinifera]
          Length = 193

 Score =  360 bits (923), Expect = 3e-97
 Identities = 169/193 (87%), Positives = 183/193 (94%)
 Frame = +2

Query: 26  MKLRYAMVCSSNQNRSMEAHSLLKRQGFDVCSYGTGAHVKLPGPSLREPNVYEFGTPYKQ 205
           MK RYAMVCSSNQNRSMEAHSLLK+QGFDV SYGTGAHVKLPGPSLREPNVYEFGTPYK 
Sbjct: 1   MKFRYAMVCSSNQNRSMEAHSLLKKQGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKH 60

Query: 206 MFDDLRRKDPELYKRNGILPMLKRNSGVKLAPQRWQDNASDGSFDVVFTFEEKVFDMAIE 385
           MFDDLRRKDP+LYKRNGILPMLKRNS VK APQRWQDNA+DG FDVVFTFEEKVFDM +E
Sbjct: 61  MFDDLRRKDPDLYKRNGILPMLKRNSSVKTAPQRWQDNAADGPFDVVFTFEEKVFDMVVE 120

Query: 386 DLHNREHVLMKTVLVINLEVKDNHEEAAVGARLTLDLCQELEATDSWEENIDSIVAAFER 565
           DLHNR+HVLMKTVLVINLEVKDNHEEAA+GARL LDLCQE+EAT+SWE+++D +V+ FE+
Sbjct: 121 DLHNRDHVLMKTVLVINLEVKDNHEEAAIGARLALDLCQEIEATESWEDSVDDVVSGFEK 180

Query: 566 QHRRKLLYSISFY 604
           QHRRKLLYSISFY
Sbjct: 181 QHRRKLLYSISFY 193


>ref|XP_002515629.1| Protein SSU72, putative [Ricinus communis]
           gi|223545267|gb|EEF46774.1| Protein SSU72, putative
           [Ricinus communis]
          Length = 193

 Score =  356 bits (913), Expect = 5e-96
 Identities = 168/193 (87%), Positives = 184/193 (95%)
 Frame = +2

Query: 26  MKLRYAMVCSSNQNRSMEAHSLLKRQGFDVCSYGTGAHVKLPGPSLREPNVYEFGTPYKQ 205
           MKLRYAMVCSSNQNRSMEAHSLLK QGFDV SYGTGAHVKLPGPSLREPNVY+FGTPYKQ
Sbjct: 1   MKLRYAMVCSSNQNRSMEAHSLLKMQGFDVSSYGTGAHVKLPGPSLREPNVYDFGTPYKQ 60

Query: 206 MFDDLRRKDPELYKRNGILPMLKRNSGVKLAPQRWQDNASDGSFDVVFTFEEKVFDMAIE 385
           MFDDLRRKDP+LYKRNGILPMLKRNS VKLAPQRWQDNA+DGSFDVVF+FEEKVFDM IE
Sbjct: 61  MFDDLRRKDPDLYKRNGILPMLKRNSSVKLAPQRWQDNAADGSFDVVFSFEEKVFDMVIE 120

Query: 386 DLHNREHVLMKTVLVINLEVKDNHEEAAVGARLTLDLCQELEATDSWEENIDSIVAAFER 565
           DLHNR+HVLM++VLVINLEVKDNHEEAA+GARL L+LCQE+EA +SWE++ID I+ AFE 
Sbjct: 121 DLHNRDHVLMRSVLVINLEVKDNHEEAAIGARLALELCQEIEAAESWEDSIDEIITAFET 180

Query: 566 QHRRKLLYSISFY 604
           +HRRKLLYS+SFY
Sbjct: 181 KHRRKLLYSVSFY 193


>ref|XP_002322116.1| predicted protein [Populus trichocarpa] gi|222869112|gb|EEF06243.1|
           predicted protein [Populus trichocarpa]
          Length = 193

 Score =  353 bits (907), Expect = 2e-95
 Identities = 167/193 (86%), Positives = 183/193 (94%)
 Frame = +2

Query: 26  MKLRYAMVCSSNQNRSMEAHSLLKRQGFDVCSYGTGAHVKLPGPSLREPNVYEFGTPYKQ 205
           MK RYAMVCSSNQNRSMEAHSLLKR GFDV SYGTGAHVKLPGPSLREPNVY+FGTPYKQ
Sbjct: 1   MKFRYAMVCSSNQNRSMEAHSLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYDFGTPYKQ 60

Query: 206 MFDDLRRKDPELYKRNGILPMLKRNSGVKLAPQRWQDNASDGSFDVVFTFEEKVFDMAIE 385
           MFDDLRRKDPELYKRNGILPMLKRNSGVKLAPQRWQDNA+DGSF VVFTFEEKVFDM +E
Sbjct: 61  MFDDLRRKDPELYKRNGILPMLKRNSGVKLAPQRWQDNAADGSFSVVFTFEEKVFDMVLE 120

Query: 386 DLHNREHVLMKTVLVINLEVKDNHEEAAVGARLTLDLCQELEATDSWEENIDSIVAAFER 565
           DLHNR+HVL+K+VLVINLEVKDNHEEAAVG +LTL+LCQ++EA +SWE++ID I+ AFE 
Sbjct: 121 DLHNRDHVLLKSVLVINLEVKDNHEEAAVGGQLTLELCQKIEAVESWEDSIDEIITAFEA 180

Query: 566 QHRRKLLYSISFY 604
           +HRRKL+YSISFY
Sbjct: 181 KHRRKLVYSISFY 193


>ref|NP_001238070.1| uncharacterized protein LOC100306388 [Glycine max]
           gi|255628381|gb|ACU14535.1| unknown [Glycine max]
          Length = 193

 Score =  347 bits (889), Expect = 3e-93
 Identities = 165/193 (85%), Positives = 179/193 (92%)
 Frame = +2

Query: 26  MKLRYAMVCSSNQNRSMEAHSLLKRQGFDVCSYGTGAHVKLPGPSLREPNVYEFGTPYKQ 205
           MK RYAMVCSSNQNRSMEAH LLKRQGFDV SYGTGAHVKLPGPSLREPNVY+FGTPYK 
Sbjct: 1   MKFRYAMVCSSNQNRSMEAHFLLKRQGFDVSSYGTGAHVKLPGPSLREPNVYDFGTPYKH 60

Query: 206 MFDDLRRKDPELYKRNGILPMLKRNSGVKLAPQRWQDNASDGSFDVVFTFEEKVFDMAIE 385
           M +DLRRKDP+LYKRNGI PMLKRNS VKLAPQRWQ+NA+DGSFDVV TFEEKVFDM IE
Sbjct: 61  MIEDLRRKDPDLYKRNGIFPMLKRNSTVKLAPQRWQENAADGSFDVVVTFEEKVFDMVIE 120

Query: 386 DLHNREHVLMKTVLVINLEVKDNHEEAAVGARLTLDLCQELEATDSWEENIDSIVAAFER 565
           DLHNR+H L+KTVLVINLEVKDNH+EAAVGARLTLDLC+E+EA +SWEE+ID I+A FE 
Sbjct: 121 DLHNRDHALLKTVLVINLEVKDNHDEAAVGARLTLDLCREIEAAESWEESIDEIIAGFEN 180

Query: 566 QHRRKLLYSISFY 604
           +HRRKLLYSISFY
Sbjct: 181 KHRRKLLYSISFY 193


>ref|XP_004137380.1| PREDICTED: RNA polymerase II subunit A C-terminal domain
           phosphatase SSU72-like [Cucumis sativus]
           gi|449506693|ref|XP_004162820.1| PREDICTED: RNA
           polymerase II subunit A C-terminal domain phosphatase
           SSU72-like [Cucumis sativus]
          Length = 193

 Score =  340 bits (873), Expect = 2e-91
 Identities = 161/193 (83%), Positives = 178/193 (92%)
 Frame = +2

Query: 26  MKLRYAMVCSSNQNRSMEAHSLLKRQGFDVCSYGTGAHVKLPGPSLREPNVYEFGTPYKQ 205
           MK RYAMVCSSNQNRSMEAHS+LK +GF+V SYGTGAHVKLPGPSLREPNVY+FGTPYK 
Sbjct: 1   MKYRYAMVCSSNQNRSMEAHSILKSKGFNVSSYGTGAHVKLPGPSLREPNVYDFGTPYKH 60

Query: 206 MFDDLRRKDPELYKRNGILPMLKRNSGVKLAPQRWQDNASDGSFDVVFTFEEKVFDMAIE 385
           MFDDLRRKDPELYKRNGILPMLKRN+ VK APQRWQDNA+DGSFDVVFTFEEKVFDM IE
Sbjct: 61  MFDDLRRKDPELYKRNGILPMLKRNAAVKTAPQRWQDNAADGSFDVVFTFEEKVFDMVIE 120

Query: 386 DLHNREHVLMKTVLVINLEVKDNHEEAAVGARLTLDLCQELEATDSWEENIDSIVAAFER 565
           DL+ R+H +MKTVL++NLEVKDNHEEAA+GARLT DLCQE+E T+SWE++ID IV  FE+
Sbjct: 121 DLNTRDHAMMKTVLIVNLEVKDNHEEAAIGARLTFDLCQEIERTESWEDSIDDIVINFEK 180

Query: 566 QHRRKLLYSISFY 604
           Q RRKLLYSISFY
Sbjct: 181 QLRRKLLYSISFY 193