BLASTX nr result

ID: Coptis21_contig00028835 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00028835
         (608 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI39006.3| unnamed protein product [Vitis vinifera]              326   2e-87
ref|XP_002317684.1| predicted protein [Populus trichocarpa] gi|2...   323   2e-86
ref|XP_002332198.1| predicted protein [Populus trichocarpa] gi|2...   320   9e-86
ref|XP_002456409.1| hypothetical protein SORBIDRAFT_03g035770 [S...   303   2e-80
ref|XP_004134889.1| PREDICTED: subtilisin-like protease SDD1-lik...   301   6e-80

>emb|CBI39006.3| unnamed protein product [Vitis vinifera]
          Length = 842

 Score =  326 bits (835), Expect = 2e-87
 Identities = 160/202 (79%), Positives = 178/202 (88%)
 Frame = +3

Query: 3   GIFVIQAAGNTGPSPKSVSSFSPWIFTVGAAAHDRVYSNSLILGNNITILGTGLAPGTDN 182
           GIFV+QAAGNTGPSPKSVSSFSPWIFTVGAAAHDR YSNS++LGNN+TI G GLAPGT  
Sbjct: 353 GIFVVQAAGNTGPSPKSVSSFSPWIFTVGAAAHDRAYSNSIVLGNNVTIPGVGLAPGTHR 412

Query: 183 GTMYTLVAATHALSNETTGVNNMYLGECQDSSSLNRDLVQGNLLICSYSIRFILGLSTIK 362
           G MYTLV+A HAL+N+TT  N+MY+GECQDSSSL +DLVQGNLLICSYSIRF+LGLSTIK
Sbjct: 413 GRMYTLVSALHALNNDTTIANDMYVGECQDSSSLKQDLVQGNLLICSYSIRFVLGLSTIK 472

Query: 363 KALETAGNLSAAGVVFYMDPFVIGFQLNPTPMVMPGVIIPSPDDSKILMKYYNSSLKRDE 542
           +AL+TA NLSAAGVVFYMDPFVIGFQLNP PM MPG+II SPDDSKI ++YYN SL+R  
Sbjct: 473 QALQTAKNLSAAGVVFYMDPFVIGFQLNPIPMKMPGIIISSPDDSKIFLQYYNHSLERQG 532

Query: 543 ISKNIVTFGAIASISGGLTANY 608
            +K IV FGA ASISGGL  NY
Sbjct: 533 STKEIVKFGAAASISGGLKPNY 554


>ref|XP_002317684.1| predicted protein [Populus trichocarpa] gi|222860749|gb|EEE98296.1|
           predicted protein [Populus trichocarpa]
          Length = 824

 Score =  323 bits (827), Expect = 2e-86
 Identities = 153/202 (75%), Positives = 181/202 (89%)
 Frame = +3

Query: 3   GIFVIQAAGNTGPSPKSVSSFSPWIFTVGAAAHDRVYSNSLILGNNITILGTGLAPGTDN 182
           GIF++QAAGNTGPSPKS+SSFSPWIFTVGAA+HDRVYSNS+ILGNN+TI G GLAPGTD 
Sbjct: 340 GIFIVQAAGNTGPSPKSMSSFSPWIFTVGAASHDRVYSNSIILGNNVTIHGVGLAPGTDE 399

Query: 183 GTMYTLVAATHALSNETTGVNNMYLGECQDSSSLNRDLVQGNLLICSYSIRFILGLSTIK 362
            TM TLV+A HA++NETT   +MY+GECQDSS+ N+D ++GNLLICSYSIRF+LGLSTIK
Sbjct: 400 DTMLTLVSALHAVNNETTVTTDMYVGECQDSSTFNQDFIEGNLLICSYSIRFVLGLSTIK 459

Query: 363 KALETAGNLSAAGVVFYMDPFVIGFQLNPTPMVMPGVIIPSPDDSKILMKYYNSSLKRDE 542
           +A+ETA NLSAAGVVFYMDPFVIG+QLNP PM +PG+IIPSPDDSK+L++YYNSSL+R+ 
Sbjct: 460 QAVETAKNLSAAGVVFYMDPFVIGYQLNPIPMSVPGIIIPSPDDSKVLLQYYNSSLERNG 519

Query: 543 ISKNIVTFGAIASISGGLTANY 608
            +K I  FGA+ASI GGL ANY
Sbjct: 520 TTKQITKFGAVASILGGLKANY 541


>ref|XP_002332198.1| predicted protein [Populus trichocarpa] gi|222875305|gb|EEF12436.1|
           predicted protein [Populus trichocarpa]
          Length = 837

 Score =  320 bits (821), Expect = 9e-86
 Identities = 153/202 (75%), Positives = 179/202 (88%)
 Frame = +3

Query: 3   GIFVIQAAGNTGPSPKSVSSFSPWIFTVGAAAHDRVYSNSLILGNNITILGTGLAPGTDN 182
           GIF +QAAGNTGPSPKS+SSFSPWIFTVGAA+HDR YSNS+ILGNN+TI G GLAPGT  
Sbjct: 345 GIFAVQAAGNTGPSPKSMSSFSPWIFTVGAASHDRAYSNSIILGNNVTIHGVGLAPGTHK 404

Query: 183 GTMYTLVAATHALSNETTGVNNMYLGECQDSSSLNRDLVQGNLLICSYSIRFILGLSTIK 362
            TM TL++A HAL+NETT   +MY+GECQDSS+ N+DLV+GNLLICSYSIRF+LGLSTIK
Sbjct: 405 NTMLTLISALHALNNETTVATDMYVGECQDSSNFNQDLVKGNLLICSYSIRFVLGLSTIK 464

Query: 363 KALETAGNLSAAGVVFYMDPFVIGFQLNPTPMVMPGVIIPSPDDSKILMKYYNSSLKRDE 542
           +A+ TA NLSAAGVVFYMDPFVIGFQLNP PM +PG+IIPSPDDSK+L++YYNSSL+R+E
Sbjct: 465 QAIATAKNLSAAGVVFYMDPFVIGFQLNPIPMRVPGIIIPSPDDSKVLLQYYNSSLERNE 524

Query: 543 ISKNIVTFGAIASISGGLTANY 608
            +K I  FG++ASI GGL ANY
Sbjct: 525 TTKKITRFGSVASILGGLKANY 546


>ref|XP_002456409.1| hypothetical protein SORBIDRAFT_03g035770 [Sorghum bicolor]
           gi|241928384|gb|EES01529.1| hypothetical protein
           SORBIDRAFT_03g035770 [Sorghum bicolor]
          Length = 868

 Score =  303 bits (775), Expect = 2e-80
 Identities = 142/202 (70%), Positives = 169/202 (83%)
 Frame = +3

Query: 3   GIFVIQAAGNTGPSPKSVSSFSPWIFTVGAAAHDRVYSNSLILGNNITILGTGLAPGTDN 182
           GIFV+QAAGNTGPSPKS+SS+SPWIFTVGA+AHDRVYSN ++LGNN+TI G GLAPGTD 
Sbjct: 381 GIFVVQAAGNTGPSPKSMSSYSPWIFTVGASAHDRVYSNYVVLGNNLTIQGVGLAPGTDG 440

Query: 183 GTMYTLVAATHALSNETTGVNNMYLGECQDSSSLNRDLVQGNLLICSYSIRFILGLSTIK 362
             MYTLVAA HAL N T     M LGECQDSS L+ DL++G +L+CSYSIRF+LGLS++K
Sbjct: 441 DCMYTLVAAPHALKNNTVSPTEMSLGECQDSSRLDADLIRGKILVCSYSIRFVLGLSSVK 500

Query: 363 KALETAGNLSAAGVVFYMDPFVIGFQLNPTPMVMPGVIIPSPDDSKILMKYYNSSLKRDE 542
           +AL+TA N+SAAGV+FY+DPFV+GFQLNPTPM MPG+IIPS DDSK+ + YYN SL RDE
Sbjct: 501 QALDTANNVSAAGVIFYLDPFVLGFQLNPTPMHMPGLIIPSSDDSKVFLTYYNDSLVRDE 560

Query: 543 ISKNIVTFGAIASISGGLTANY 608
            S  +V+FG +A I GGL  NY
Sbjct: 561 TSGQVVSFGGVAKILGGLNPNY 582


>ref|XP_004134889.1| PREDICTED: subtilisin-like protease SDD1-like [Cucumis sativus]
          Length = 859

 Score =  301 bits (771), Expect = 6e-80
 Identities = 143/202 (70%), Positives = 177/202 (87%)
 Frame = +3

Query: 3   GIFVIQAAGNTGPSPKSVSSFSPWIFTVGAAAHDRVYSNSLILGNNITILGTGLAPGTDN 182
           GIFV+QAAGNTGP+PKS+SSFSPWIFTVGAA+HDR Y+NS+ LGNNITI G GLAPGT N
Sbjct: 353 GIFVVQAAGNTGPAPKSMSSFSPWIFTVGAASHDRSYANSISLGNNITIPGVGLAPGTYN 412

Query: 183 GTMYTLVAATHALSNETTGVNNMYLGECQDSSSLNRDLVQGNLLICSYSIRFILGLSTIK 362
            T Y L+AA HAL+N+T+   +MY+GECQDSS+ +++L++GNLLICSYSIRF+LGLST+K
Sbjct: 413 DTKYKLIAAIHALNNDTSVSEDMYVGECQDSSNFDQNLIEGNLLICSYSIRFVLGLSTVK 472

Query: 363 KALETAGNLSAAGVVFYMDPFVIGFQLNPTPMVMPGVIIPSPDDSKILMKYYNSSLKRDE 542
           +AL+TA NLSAAGV+FYMD FVIGF+LNP PM MPG+I+ SP+DSK+L++YYNSSL+ D 
Sbjct: 473 QALQTAKNLSAAGVIFYMDSFVIGFRLNPIPMKMPGIIVSSPEDSKMLLQYYNSSLEVDG 532

Query: 543 ISKNIVTFGAIASISGGLTANY 608
           ++K I  FGA+ASI GGL ANY
Sbjct: 533 LTKKISKFGAVASICGGLKANY 554


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