BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00028831
         (1154 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN83583.1| hypothetical protein VITISV_009664 [Vitis vinifera]   319   7e-85
ref|XP_002326221.1| predicted protein [Populus trichocarpa] gi|2...   281   3e-73
ref|XP_003633481.1| PREDICTED: uncharacterized protein LOC100254...   280   5e-73
ref|XP_002534081.1| DNA repair protein RAD50, putative [Ricinus ...   270   5e-70
ref|XP_002264975.2| PREDICTED: uncharacterized protein LOC100248...   257   3e-66

>emb|CAN83583.1| hypothetical protein VITISV_009664 [Vitis vinifera]
          Length = 2427

 Score =  319 bits (818), Expect = 7e-85
 Identities = 191/388 (49%), Positives = 254/388 (65%), Gaps = 6/388 (1%)
 Frame = +3

Query: 6    TFSPRHDFSGDLYEPIGRQDSPSLRNGGTHGAVPVGDHSRSNQTSFNSRFTTSGSNLHSQ 185
            +FS  ++ +GD  +P GR DS S +   +H      D  +S  + FNSR   SG+   + 
Sbjct: 226  SFSSANNMNGDGNKPTGRDDSTSSQTSASHDKYTFEDPPQSIHSLFNSRVMGSGNLSQNP 285

Query: 186  RQELGNSPST-LAMSSLGNARSSKELLEAAEDTIEELRSEAKMWERNARKLMHDLELVRK 362
              ++  S S  +A SSL N  SSK LLEAAEDTIEELR+EAKMWERN++KLM DLE++RK
Sbjct: 286  PPDIALSASNVIASSSLTNGGSSKNLLEAAEDTIEELRAEAKMWERNSQKLMLDLEILRK 345

Query: 363  ESTGQSRHLADLDMELSAACTERDXXXXXXXXXXXXXXXXXXXNMASEHSISQAEGISHI 542
            E + QS++ A LDMELSAA +ERD                       E S  Q EG +HI
Sbjct: 346  EFSDQSKNQATLDMELSAAYSERDALKKEIDQLKILLEESKMKQAMGE-STFQDEGATHI 404

Query: 543  QKELESEIKFQKESNTNLAVQLEKTQESNIELVSILQELEETIEKQRLEIDAISAERLNL 722
            QKELE EIKFQKESN NLA+QL ++QESNIELVS+LQELE TIEKQ++E++ ++A RL L
Sbjct: 405  QKELEDEIKFQKESNANLALQLRRSQESNIELVSVLQELELTIEKQKIELEDLAALRLKL 464

Query: 723  STEENCEHGNEDMECPNENQDV----QKLVEAQKELQATVCLLEEKLQDKNKELELEQN- 887
            +  ++  H     E   EN+DV    Q+L +++K LQ  V  LE+ L+DKN ELE E++ 
Sbjct: 465  NDADSSIH-----ESLAENKDVALQLQQLQDSEKNLQVKVGFLEQALEDKNHELENERSL 519

Query: 888  SRRTLLELEADYKYKLSVREVEMMKLEANLSDLLNTQGSNDNRCSHGIDSDLVKEIETLK 1067
            S + +L++E  YK KLS +E E++ LEA LS+ +    S     ++G D  L+KEIE LK
Sbjct: 520  SNQAILDVETGYKSKLSAKEEEIVDLEARLSESIKGTNSEQMVANNGGDESLIKEIEALK 579

Query: 1068 EKVQELENDCNELTEENLELIFKLQESK 1151
             K++ELE DCNELT+ENLEL+FKL+ESK
Sbjct: 580  VKLEELERDCNELTDENLELLFKLKESK 607


>ref|XP_002326221.1| predicted protein [Populus trichocarpa] gi|222833414|gb|EEE71891.1|
            predicted protein [Populus trichocarpa]
          Length = 1228

 Score =  281 bits (718), Expect = 3e-73
 Identities = 176/384 (45%), Positives = 240/384 (62%), Gaps = 1/384 (0%)
 Frame = +3

Query: 6    TFSPRHDFSGDLYEPIGRQDSPSLRNGGTHGAVPVGDHSRSNQTSFNSRFTTSGSNLHSQ 185
            +FSP ++ SGD  EP      P+  +  +  + P+G+ S SN +SF SR T   +     
Sbjct: 88   SFSPSNNLSGD--EPPLISGKPN--SASSQKSYPMGNPSESNHSSFKSRITLPENLSQED 143

Query: 186  RQELGNSPSTLAMSSLGNARSSKELLEAAEDTIEELRSEAKMWERNARKLMHDLELVRKE 365
             QE        A SSL  + SSK LLE AEDTIE+LR+EAKMWERNARKLM D+E++RKE
Sbjct: 144  TQEF-------ATSSLRISGSSKSLLETAEDTIEDLRNEAKMWERNARKLMLDMEILRKE 196

Query: 366  STGQSRHLADLDMELSAACTERDXXXXXXXXXXXXXXXXXXXNMASEHSISQAEGISHIQ 545
             + QS++ A++ MELSAAC ERD                     A E    Q EG     
Sbjct: 197  YSEQSKNQANMYMELSAACAERDGLQKEVEQLKLLLEKSTAKPAAFEDYTFQDEG---AV 253

Query: 546  KELESEIKFQKESNTNLAVQLEKTQESNIELVSILQELEETIEKQRLEIDAISAERLNLS 725
            KELE+++ FQ+ESN NL +QL+++QESN ELVS+LQELEETIEKQ+ EID +SA +   S
Sbjct: 254  KELENDVMFQRESNANLNLQLKRSQESNAELVSVLQELEETIEKQKDEIDNLSALQSKFS 313

Query: 726  TEENCEHGNEDMECPNENQDVQKLVEAQKELQATVCLLEEKLQDKNKELELEQNSRRTLL 905
              EN    N +    N     Q+L E++K LQA V  LE+ L+DKN+ +E E+ + R  L
Sbjct: 314  DMENSIQMNVEKN-RNLILHTQQLQESEKILQAKVQALEQDLEDKNRSIENERMNNRNFL 372

Query: 906  ELEADYKYKLSVREVEMMKLEANLSDLLNTQG-SNDNRCSHGIDSDLVKEIETLKEKVQE 1082
            ++E +YK KL+V+E E++ L+A LS+ LN +  S       G D +L++EIE LK K+QE
Sbjct: 373  DMETEYKCKLTVKEKEIVSLKAKLSESLNERHYSTKMESITGGDENLIREIEALKVKLQE 432

Query: 1083 LENDCNELTEENLELIFKLQESKK 1154
            LE+DC ELT+ENLEL+ KL+E ++
Sbjct: 433  LESDCQELTDENLELLLKLKEKRE 456


>ref|XP_003633481.1| PREDICTED: uncharacterized protein LOC100254715 [Vitis vinifera]
          Length = 1395

 Score =  280 bits (716), Expect = 5e-73
 Identities = 164/382 (42%), Positives = 232/382 (60%), Gaps = 1/382 (0%)
 Frame = +3

Query: 12   SPRHDFSGDLYEPIGRQDSPSLRNGGTHGAVPVGDHSRSNQTSFNSRFTTSGSNLHSQRQ 191
            SP++ F+G + + IG+QDS S  +    G+ P  D SRSN++SFNS+ ++SGS+L +QR 
Sbjct: 229  SPQNPFTGVMNDLIGKQDSTSSNSSSLFGSYPANDISRSNRSSFNSKVSSSGSHLQNQRD 288

Query: 192  ELGNSPSTLAMSSLGNARSSKELLEAAEDTIEELRSEAKMWERNARKLMHDLELVRKEST 371
            + G     +A S L NA S K+L EAAE   EELR+EA+MWE+NARKLMHDLE++RKE +
Sbjct: 289  DFGRVSHAIATSPLRNAGSCKDL-EAAEGAFEELRAEARMWEQNARKLMHDLEILRKEFS 347

Query: 372  GQSRHLADLDMELSAACTERDXXXXXXXXXXXXXXXXXXXNMASEHSISQAEGISHIQKE 551
             QS++ ADLDMEL+A+ TE +                      +E+   QA+ +++IQ+E
Sbjct: 348  NQSKNQADLDMELAASHTECNRLRQEIEQLNFLLEELTVRQKDTENLKLQAQNMNNIQQE 407

Query: 552  LESEIKFQKESNTNLAVQLEKTQESNIELVSILQELEETIEKQRLEIDAISAERLNLSTE 731
            LE EIKFQKESN NL +QL+KTQESNIELVS+LQE+EE IEKQ++EI  +S E       
Sbjct: 408  LEDEIKFQKESNANLTIQLKKTQESNIELVSVLQEMEEMIEKQKMEITDLSKE------- 460

Query: 732  ENCEHGNEDMECPNENQDVQKLVEAQKELQATVCLLEEKLQDKNKELELEQNSR-RTLLE 908
                                                      KN E+E+E++ + + LL+
Sbjct: 461  ------------------------------------------KNHEIEIERDLKAQALLD 478

Query: 909  LEADYKYKLSVREVEMMKLEANLSDLLNTQGSNDNRCSHGIDSDLVKEIETLKEKVQELE 1088
             + ++K KL+ +EV+++ LE  LS+ ++     +    +G D +L+KEIE LK KVQELE
Sbjct: 479  CQEEWKCKLAAKEVDIISLETKLSEAIHALNVKETGPQNGGDHNLIKEIEALKVKVQELE 538

Query: 1089 NDCNELTEENLELIFKLQESKK 1154
             DC ELT+ENL L FK++ES K
Sbjct: 539  RDCVELTDENLSLHFKIKESSK 560


>ref|XP_002534081.1| DNA repair protein RAD50, putative [Ricinus communis]
            gi|223525882|gb|EEF28304.1| DNA repair protein RAD50,
            putative [Ricinus communis]
          Length = 1362

 Score =  270 bits (690), Expect = 5e-70
 Identities = 164/383 (42%), Positives = 230/383 (60%)
 Frame = +3

Query: 6    TFSPRHDFSGDLYEPIGRQDSPSLRNGGTHGAVPVGDHSRSNQTSFNSRFTTSGSNLHSQ 185
            T+SP ++ +G +   IGRQDS   +N  +HG+    D SRSNQ+SFNS+   S S+L  Q
Sbjct: 187  TYSPLNNLTGIMNNQIGRQDSTGSQNS-SHGSYSFNDSSRSNQSSFNSKVLASRSSLQIQ 245

Query: 186  RQELGNSPSTLAMSSLGNARSSKELLEAAEDTIEELRSEAKMWERNARKLMHDLELVRKE 365
            R E      ++A S L NA SSK+LLEAAE  IEELR+EA+MWE+NARKLM+DLE +RKE
Sbjct: 246  RDEFNQVSRSVASSPLRNAGSSKDLLEAAEAKIEELRAEARMWEQNARKLMNDLEKLRKE 305

Query: 366  STGQSRHLADLDMELSAACTERDXXXXXXXXXXXXXXXXXXXNMASEHSISQAEGISHIQ 545
             + QS+  A L+MELS +  E D                     ++E+   QA+ + ++Q
Sbjct: 306  LSDQSKCQASLEMELSESRRECDGLKQEIEQVKILLEESLVKQKSAENMELQAKDMGNLQ 365

Query: 546  KELESEIKFQKESNTNLAVQLEKTQESNIELVSILQELEETIEKQRLEIDAISAERLNLS 725
            KELE E++F+KESN NLA+QL+KTQESNIELVSILQELE+TIEK ++EI  +S E++   
Sbjct: 366  KELEDEVRFEKESNANLALQLKKTQESNIELVSILQELEDTIEKLKMEIANLSKEKV--- 422

Query: 726  TEENCEHGNEDMECPNENQDVQKLVEAQKELQATVCLLEEKLQDKNKELELEQNSRRTLL 905
                                        +EL+A   L  + L                 +
Sbjct: 423  ----------------------------QELEAAEVLKTQTL-----------------M 437

Query: 906  ELEADYKYKLSVREVEMMKLEANLSDLLNTQGSNDNRCSHGIDSDLVKEIETLKEKVQEL 1085
            E EA ++ KL+V+E E++ L++ LS+ L       +   +G D +L+KE+E LK+K++EL
Sbjct: 438  ECEAQWRDKLAVKEEEIINLKSKLSEALKV-----DNFENGADKNLIKEVEVLKQKIEEL 492

Query: 1086 ENDCNELTEENLELIFKLQESKK 1154
            E DCNELT+ENLEL+ KL+ES+K
Sbjct: 493  EKDCNELTDENLELLLKLKESEK 515


>ref|XP_002264975.2| PREDICTED: uncharacterized protein LOC100248757 [Vitis vinifera]
          Length = 2411

 Score =  257 bits (657), Expect = 3e-66
 Identities = 168/383 (43%), Positives = 221/383 (57%), Gaps = 1/383 (0%)
 Frame = +3

Query: 6    TFSPRHDFSGDLYEPIGRQDSPSLRNGGTHGAVPVGDHSRSNQTSFNSRFTTSGSNLHSQ 185
            +FS  ++ +GD  +P GR DS S +   +H      D  +S  + FNSR   SG+   + 
Sbjct: 226  SFSSANNMNGDGNKPTGRDDSTSSQTSASHDKYTFEDPPQSIHSLFNSRVMGSGNLSQNP 285

Query: 186  RQELGNSPST-LAMSSLGNARSSKELLEAAEDTIEELRSEAKMWERNARKLMHDLELVRK 362
              ++  S S  +A SSL N  SSK LLEAAEDTIEELR+EAKMWERN++KLM DLE++RK
Sbjct: 286  PPDIALSASNVIASSSLTNGGSSKNLLEAAEDTIEELRAEAKMWERNSQKLMLDLEILRK 345

Query: 363  ESTGQSRHLADLDMELSAACTERDXXXXXXXXXXXXXXXXXXXNMASEHSISQAEGISHI 542
            E + QS++ A LDMELSAA +ERD                       E S  Q EG +HI
Sbjct: 346  EFSDQSKNQATLDMELSAAYSERDALKKEIDQLKILLEESKMKQAMGE-STFQDEGATHI 404

Query: 543  QKELESEIKFQKESNTNLAVQLEKTQESNIELVSILQELEETIEKQRLEIDAISAERLNL 722
            QKELE EIKFQKESN NLA+QL ++QESNIELVS+LQELE TIEKQ++E++ ++A RL L
Sbjct: 405  QKELEDEIKFQKESNANLALQLRRSQESNIELVSVLQELELTIEKQKIELEDLAALRLKL 464

Query: 723  STEENCEHGNEDMECPNENQDVQKLVEAQKELQATVCLLEEKLQDKNKELELEQNSRRTL 902
            +  ++  H     E   EN+D                  + KL  K +E          +
Sbjct: 465  NDADSSIH-----ESLAENKDTG---------------YKSKLSAKEEE----------I 494

Query: 903  LELEADYKYKLSVREVEMMKLEANLSDLLNTQGSNDNRCSHGIDSDLVKEIETLKEKVQE 1082
            ++LEA                   LS+ +    S     ++G D  L+KEIE LK K++E
Sbjct: 495  VDLEA------------------RLSESIKGTNSEQMVANNGGDESLIKEIEALKVKLEE 536

Query: 1083 LENDCNELTEENLELIFKLQESK 1151
            LE DCNELT+ENLEL+FKL+ESK
Sbjct: 537  LERDCNELTDENLELLFKLKESK 559