BLASTX nr result

ID: Coptis21_contig00028817 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00028817
         (239 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002300446.1| predicted protein [Populus trichocarpa] gi|2...    61   1e-07
ref|XP_003545700.1| PREDICTED: uncharacterized protein LOC100803...    58   7e-07
ref|XP_002331309.1| predicted protein [Populus trichocarpa] gi|2...    56   3e-06
emb|CBI20091.3| unnamed protein product [Vitis vinifera]               56   3e-06
ref|XP_002283739.1| PREDICTED: uncharacterized protein LOC100260...    56   3e-06

>ref|XP_002300446.1| predicted protein [Populus trichocarpa] gi|222847704|gb|EEE85251.1|
           predicted protein [Populus trichocarpa]
          Length = 573

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 28/68 (41%), Positives = 46/68 (67%)
 Frame = +2

Query: 32  SLENDSKLKDLKGVTLGGTDAENGRLQGYVHYIRFILPQKSAVEDHFVKNPPIELSIDTA 211
           SL+  S    L+ +TL G   ++  LQGYVH++  +LP   ++++H+VK+PP+ LSID +
Sbjct: 103 SLDKSSNSNGLRKITLAGAGGDDA-LQGYVHHVE-VLPLSMSIKEHYVKDPPVRLSIDLS 160

Query: 212 GITEIEED 235
             +EI+ED
Sbjct: 161 STSEIDED 168


>ref|XP_003545700.1| PREDICTED: uncharacterized protein LOC100803169 [Glycine max]
          Length = 704

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 31/78 (39%), Positives = 47/78 (60%)
 Frame = +2

Query: 2   ELEGEKSFLSSLENDSKLKDLKGVTLGGTDAENGRLQGYVHYIRFILPQKSAVEDHFVKN 181
           E+ GEKS  S L  +S    LK +TL     +   +QGYVH    I P  ++++D  +K 
Sbjct: 126 EIVGEKSLCSLLNKESGSSHLKKLTLANVGGDGKSVQGYVHNFE-IFPIITSIKDCHLKC 184

Query: 182 PPIELSIDTAGITEIEED 235
           PP++LSID + ++EIEE+
Sbjct: 185 PPLKLSIDESSVSEIEEE 202


>ref|XP_002331309.1| predicted protein [Populus trichocarpa] gi|222873892|gb|EEF11023.1|
           predicted protein [Populus trichocarpa]
          Length = 543

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 31/78 (39%), Positives = 51/78 (65%)
 Frame = +2

Query: 2   ELEGEKSFLSSLENDSKLKDLKGVTLGGTDAENGRLQGYVHYIRFILPQKSAVEDHFVKN 181
           E+  E+   SSL+ +     L+ + L G+ A++G LQGYV++   +LP   +++DH+VK+
Sbjct: 59  EIVSEQPQSSSLDKNWNSNGLRKIALVGSCADDG-LQGYVYHAE-VLPLSLSIKDHYVKD 116

Query: 182 PPIELSIDTAGITEIEED 235
           PP  LSID +  +EI+ED
Sbjct: 117 PPPWLSIDLSSTSEIDED 134


>emb|CBI20091.3| unnamed protein product [Vitis vinifera]
          Length = 675

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 34/82 (41%), Positives = 53/82 (64%), Gaps = 4/82 (4%)
 Frame = +2

Query: 2   ELEGEKSFLSSLENDSKLKDLKG----VTLGGTDAENGRLQGYVHYIRFILPQKSAVEDH 169
           ++ GEK  LSSL N+    +  G    V +GG DA    +QGY+H  + ILP   +++DH
Sbjct: 127 KIVGEK-LLSSLSNNESDSNGSGRVTLVGIGGDDA----VQGYIHNAK-ILPLTFSIKDH 180

Query: 170 FVKNPPIELSIDTAGITEIEED 235
           +V++PP++LSID++   +IEED
Sbjct: 181 YVQDPPLQLSIDSSTALDIEED 202


>ref|XP_002283739.1| PREDICTED: uncharacterized protein LOC100260583 [Vitis vinifera]
          Length = 683

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 34/82 (41%), Positives = 53/82 (64%), Gaps = 4/82 (4%)
 Frame = +2

Query: 2   ELEGEKSFLSSLENDSKLKDLKG----VTLGGTDAENGRLQGYVHYIRFILPQKSAVEDH 169
           ++ GEK  LSSL N+    +  G    V +GG DA    +QGY+H  + ILP   +++DH
Sbjct: 127 KIVGEK-LLSSLSNNESDSNGSGRVTLVGIGGDDA----VQGYIHNAK-ILPLTFSIKDH 180

Query: 170 FVKNPPIELSIDTAGITEIEED 235
           +V++PP++LSID++   +IEED
Sbjct: 181 YVQDPPLQLSIDSSTALDIEED 202


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