BLASTX nr result

ID: Coptis21_contig00028806 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00028806
         (691 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631895.1| PREDICTED: transformation/transcription doma...    65   2e-08
emb|CBI17379.3| unnamed protein product [Vitis vinifera]               65   2e-08
emb|CAN65160.1| hypothetical protein VITISV_021747 [Vitis vinifera]    65   2e-08
ref|XP_002521662.1| inositol or phosphatidylinositol kinase, put...    64   4e-08
ref|XP_004158871.1| PREDICTED: LOW QUALITY PROTEIN: transformati...    63   5e-08

>ref|XP_003631895.1| PREDICTED: transformation/transcription domain-associated protein
            [Vitis vinifera]
          Length = 3906

 Score = 64.7 bits (156), Expect = 2e-08
 Identities = 30/38 (78%), Positives = 34/38 (89%)
 Frame = -1

Query: 412  GLALISSLVKLVPDWLQTNRVVFDTLVLVWKSPDRTAR 299
            GLALIS++VKL+P WLQ+NRVVFDTLVLVWKSP R  R
Sbjct: 1650 GLALISTMVKLMPGWLQSNRVVFDTLVLVWKSPARITR 1687



 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 50/138 (36%), Positives = 67/138 (48%), Gaps = 13/138 (9%)
 Frame = -2

Query: 633  GLSLREELARSPQKIVASAFPQCFRRMDGSTLPGSPTLLASSVNDESLCYLFSRGS**ST 454
            G  LREELA+SP+KI+ASAFP+   R D S  PGS    A+   DE+L            
Sbjct: 1578 GQPLREELAKSPKKILASAFPEFLPRSDASMTPGSLNPSAAITGDEAL------------ 1625

Query: 453  FKAWLKRRFLSLIRGLLSSHHWSNWCLTGCKLI--VWSLIPWFLFGNRLI---------- 310
                +  +  S I    SS   S+    G  LI  +  L+P +L  NR++          
Sbjct: 1626 ----VTPQTESSIPPSSSSSANSDAYFQGLALISTMVKLMPGWLQSNRVVFDTLVLVWKS 1681

Query: 309  -ELLDRLHNEQKLSLVQV 259
               + RLHNEQ+L+LVQV
Sbjct: 1682 PARITRLHNEQELNLVQV 1699


>emb|CBI17379.3| unnamed protein product [Vitis vinifera]
          Length = 3681

 Score = 64.7 bits (156), Expect = 2e-08
 Identities = 30/38 (78%), Positives = 34/38 (89%)
 Frame = -1

Query: 412  GLALISSLVKLVPDWLQTNRVVFDTLVLVWKSPDRTAR 299
            GLALIS++VKL+P WLQ+NRVVFDTLVLVWKSP R  R
Sbjct: 1498 GLALISTMVKLMPGWLQSNRVVFDTLVLVWKSPARITR 1535


>emb|CAN65160.1| hypothetical protein VITISV_021747 [Vitis vinifera]
          Length = 2411

 Score = 64.7 bits (156), Expect = 2e-08
 Identities = 30/38 (78%), Positives = 34/38 (89%)
 Frame = -1

Query: 412  GLALISSLVKLVPDWLQTNRVVFDTLVLVWKSPDRTAR 299
            GLALIS++VKL+P WLQ+NRVVFDTLVLVWKSP R  R
Sbjct: 1218 GLALISTMVKLMPGWLQSNRVVFDTLVLVWKSPARITR 1255



 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 50/138 (36%), Positives = 67/138 (48%), Gaps = 13/138 (9%)
 Frame = -2

Query: 633  GLSLREELARSPQKIVASAFPQCFRRMDGSTLPGSPTLLASSVNDESLCYLFSRGS**ST 454
            G  LREELA+SP+KI+ASAFP+   R D S  PGS    A+   DE+L            
Sbjct: 1146 GQPLREELAKSPKKILASAFPEFLPRSDASMTPGSLNPSAAITGDEAL------------ 1193

Query: 453  FKAWLKRRFLSLIRGLLSSHHWSNWCLTGCKLI--VWSLIPWFLFGNRLI---------- 310
                +  +  S I    SS   S+    G  LI  +  L+P +L  NR++          
Sbjct: 1194 ----VTPQTESSIPPSSSSSANSDAYFQGLALISTMVKLMPGWLQSNRVVFDTLVLVWKS 1249

Query: 309  -ELLDRLHNEQKLSLVQV 259
               + RLHNEQ+L+LVQV
Sbjct: 1250 PARITRLHNEQELNLVQV 1267


>ref|XP_002521662.1| inositol or phosphatidylinositol kinase, putative [Ricinus communis]
            gi|223539053|gb|EEF40649.1| inositol or
            phosphatidylinositol kinase, putative [Ricinus communis]
          Length = 3772

 Score = 63.5 bits (153), Expect = 4e-08
 Identities = 30/42 (71%), Positives = 35/42 (83%)
 Frame = -1

Query: 412  GLALISSLVKLVPDWLQTNRVVFDTLVLVWKSPDRTARSFTQ 287
            GLALI +LVKL+P WL +NR VFDTLVLVWKSP RT+R  T+
Sbjct: 1517 GLALIKTLVKLIPGWLHSNRNVFDTLVLVWKSPARTSRLQTE 1558


>ref|XP_004158871.1| PREDICTED: LOW QUALITY PROTEIN: transformation/transcription
            domain-associated protein-like [Cucumis sativus]
          Length = 3889

 Score = 63.2 bits (152), Expect = 5e-08
 Identities = 29/38 (76%), Positives = 33/38 (86%)
 Frame = -1

Query: 412  GLALISSLVKLVPDWLQTNRVVFDTLVLVWKSPDRTAR 299
            GLAL+ +LVKL+P WLQ+NRVVFDTLV VWKSP R AR
Sbjct: 1637 GLALVKTLVKLMPGWLQSNRVVFDTLVAVWKSPARIAR 1674


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