BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00028796
         (319 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280748.1| PREDICTED: DNA repair protein RAD51 homolog ...   170   1e-40
ref|XP_002511689.1| DNA repair and recombination protein radA, p...   166   2e-39
gb|AAL84941.1| At2g45280/F4L23.21 [Arabidopsis thaliana]              161   6e-38
ref|NP_001189749.1| DNA repair protein RAD51-like 3 [Arabidopsis...   161   6e-38
dbj|BAC42893.1| putative f4l23 RAD51Calpha DNA repair-recombinat...   161   6e-38

>ref|XP_002280748.1| PREDICTED: DNA repair protein RAD51 homolog 3 [Vitis vinifera]
           gi|296089196|emb|CBI38899.3| unnamed protein product
           [Vitis vinifera]
          Length = 346

 Score =  170 bits (431), Expect = 1e-40
 Identities = 84/101 (83%), Positives = 92/101 (91%)
 Frame = +3

Query: 3   TRVLSGIALKLMKLAKMFSL*VVQLNQVTTKFTEGSFQLTLALGDSWSHACTNRVILYWN 182
           TR+LSG+ALKLMKLAK FSL VV LNQVTTK TEGSFQLTLALGDSWSH+CTNRVILYWN
Sbjct: 246 TRLLSGMALKLMKLAKKFSLAVVLLNQVTTKHTEGSFQLTLALGDSWSHSCTNRVILYWN 305

Query: 183 GSERFAYIDKSPSLRSASAPYSVTSRGIRDSASNCKRIRMM 305
           G ER+AYIDKSPSLRSASAPYSVT +GIR + S CKRI++M
Sbjct: 306 GDERYAYIDKSPSLRSASAPYSVTGKGIRTATSKCKRIKIM 346


>ref|XP_002511689.1| DNA repair and recombination protein radA, putative [Ricinus
           communis] gi|223548869|gb|EEF50358.1| DNA repair and
           recombination protein radA, putative [Ricinus communis]
          Length = 346

 Score =  166 bits (419), Expect = 2e-39
 Identities = 80/101 (79%), Positives = 93/101 (92%)
 Frame = +3

Query: 3   TRVLSGIALKLMKLAKMFSL*VVQLNQVTTKFTEGSFQLTLALGDSWSHACTNRVILYWN 182
           TRVLSG+ALKLMK+AK FSL VV LNQVTTK TEGSFQL LALG+SWSH+CTNR+ILYWN
Sbjct: 246 TRVLSGMALKLMKIAKSFSLAVVLLNQVTTKHTEGSFQLGLALGESWSHSCTNRIILYWN 305

Query: 183 GSERFAYIDKSPSLRSASAPYSVTSRGIRDSASNCKRIRMM 305
            +ER+AYIDKSPSL+SA+APYSVT  GIR+S+SNCKR++MM
Sbjct: 306 SNERYAYIDKSPSLKSATAPYSVTRGGIRNSSSNCKRVKMM 346


>gb|AAL84941.1| At2g45280/F4L23.21 [Arabidopsis thaliana]
          Length = 363

 Score =  161 bits (407), Expect = 6e-38
 Identities = 80/101 (79%), Positives = 91/101 (90%)
 Frame = +3

Query: 3   TRVLSGIALKLMKLAKMFSL*VVQLNQVTTKFTEGSFQLTLALGDSWSHACTNRVILYWN 182
           TRVLS +ALK MKLAK FSL VV LNQVTTKF+EGSFQL LALGDSWSH+CTNRVILYWN
Sbjct: 263 TRVLSEMALKFMKLAKKFSLAVVLLNQVTTKFSEGSFQLALALGDSWSHSCTNRVILYWN 322

Query: 183 GSERFAYIDKSPSLRSASAPYSVTSRGIRDSASNCKRIRMM 305
           G ER+AYIDKSPSL SASA Y+VTSRG+R+S+S+ KR++MM
Sbjct: 323 GDERYAYIDKSPSLPSASASYTVTSRGLRNSSSSSKRVKMM 363


>ref|NP_001189749.1| DNA repair protein RAD51-like 3 [Arabidopsis thaliana]
           gi|330255440|gb|AEC10534.1| DNA repair protein
           RAD51-like 3 [Arabidopsis thaliana]
          Length = 387

 Score =  161 bits (407), Expect = 6e-38
 Identities = 80/101 (79%), Positives = 91/101 (90%)
 Frame = +3

Query: 3   TRVLSGIALKLMKLAKMFSL*VVQLNQVTTKFTEGSFQLTLALGDSWSHACTNRVILYWN 182
           TRVLS +ALK MKLAK FSL VV LNQVTTKF+EGSFQL LALGDSWSH+CTNRVILYWN
Sbjct: 287 TRVLSEMALKFMKLAKKFSLAVVLLNQVTTKFSEGSFQLALALGDSWSHSCTNRVILYWN 346

Query: 183 GSERFAYIDKSPSLRSASAPYSVTSRGIRDSASNCKRIRMM 305
           G ER+AYIDKSPSL SASA Y+VTSRG+R+S+S+ KR++MM
Sbjct: 347 GDERYAYIDKSPSLPSASASYTVTSRGLRNSSSSSKRVKMM 387


>dbj|BAC42893.1| putative f4l23 RAD51Calpha DNA repair-recombination factor
           [Arabidopsis thaliana]
          Length = 342

 Score =  161 bits (407), Expect = 6e-38
 Identities = 80/101 (79%), Positives = 91/101 (90%)
 Frame = +3

Query: 3   TRVLSGIALKLMKLAKMFSL*VVQLNQVTTKFTEGSFQLTLALGDSWSHACTNRVILYWN 182
           TRVLS +ALK MKLAK FSL VV LNQVTTKF+EGSFQL LALGDSWSH+CTNRVILYWN
Sbjct: 242 TRVLSEMALKFMKLAKKFSLAVVLLNQVTTKFSEGSFQLALALGDSWSHSCTNRVILYWN 301

Query: 183 GSERFAYIDKSPSLRSASAPYSVTSRGIRDSASNCKRIRMM 305
           G ER+AYIDKSPSL SASA Y+VTSRG+R+S+S+ KR++MM
Sbjct: 302 GDERYAYIDKSPSLPSASASYTVTSRGLRNSSSSSKRVKMM 342