BLASTX nr result

ID: Coptis21_contig00028793 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00028793
         (591 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002515331.1| conserved hypothetical protein [Ricinus comm...   137   2e-30
ref|XP_002302741.1| predicted protein [Populus trichocarpa] gi|2...   127   1e-27
ref|XP_002274279.1| PREDICTED: uncharacterized protein LOC100260...   118   7e-25
ref|XP_002320323.1| predicted protein [Populus trichocarpa] gi|2...   116   3e-24
ref|XP_003535999.1| PREDICTED: uncharacterized protein LOC100806...   113   3e-23

>ref|XP_002515331.1| conserved hypothetical protein [Ricinus communis]
           gi|223545811|gb|EEF47315.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 156

 Score =  137 bits (344), Expect = 2e-30
 Identities = 77/144 (53%), Positives = 96/144 (66%), Gaps = 12/144 (8%)
 Frame = +1

Query: 19  MEGVSAS------SWRRKKGYERLDGSGRRHKIPVVELGALGS-----SHKRRFSWKVKI 165
           MEGVSAS      S+ R++GY+RL+ SGRR ++  VELG   +     S +R+ SW++KI
Sbjct: 1   MEGVSASMYTKIRSYWRRRGYQRLNESGRRRRMNTVELGGGSATTTRGSRRRKMSWRIKI 60

Query: 166 KPKLRFLNLCSPKKFLTRLRDGYVNMMLGFANSRVFTNGSGYNGNETIDNGLRRAPAKEY 345
           KPKL+     SPKKF   LRD YVNMMLGFANSRV   G GY G   I     + P KEY
Sbjct: 61  KPKLKIFKRASPKKFFVWLRDAYVNMMLGFANSRVI--GPGYGGGGGIATNFGKGPLKEY 118

Query: 346 DERMLIEIYKALMA-QGQLVSRDA 414
           DE+M+I+IYK+L+A QGQLV  DA
Sbjct: 119 DEKMIIQIYKSLVAGQGQLVPHDA 142


>ref|XP_002302741.1| predicted protein [Populus trichocarpa] gi|222844467|gb|EEE82014.1|
           predicted protein [Populus trichocarpa]
          Length = 148

 Score =  127 bits (319), Expect = 1e-27
 Identities = 72/141 (51%), Positives = 93/141 (65%), Gaps = 9/141 (6%)
 Frame = +1

Query: 19  MEGVSASSWRRKK------GYERLDGSGRRHKIPVVELGALG--SSHKRRFSWKVKIKPK 174
           MEGVSA  + + K      GYER++GSGR  +   VE+G++   S  +RRF+W++K+KPK
Sbjct: 1   MEGVSARIFTKMKEYWSRRGYERINGSGRTRRSWPVEVGSVSTTSRRRRRFAWRIKVKPK 60

Query: 175 LRFLNLCSPKKFLTRLRDGYVNMMLGFANSRVFTNGSGYNGNETIDNGLRRAPAKEYDER 354
           L+ L + SPK+F   LRD YV MMLGFANSR         G     +G+   P KEYDE+
Sbjct: 61  LKALKMSSPKRFFVWLRDAYVKMMLGFANSRA-------RGTAGYGDGIGARPIKEYDEK 113

Query: 355 MLIEIYKAL-MAQGQLVSRDA 414
           M+IEIYK+L MAQGQLV RDA
Sbjct: 114 MIIEIYKSLVMAQGQLVPRDA 134


>ref|XP_002274279.1| PREDICTED: uncharacterized protein LOC100260563 [Vitis vinifera]
           gi|147780786|emb|CAN70481.1| hypothetical protein
           VITISV_002249 [Vitis vinifera]
          Length = 143

 Score =  118 bits (296), Expect = 7e-25
 Identities = 78/139 (56%), Positives = 92/139 (66%), Gaps = 7/139 (5%)
 Frame = +1

Query: 16  EMEGVSA-----SSWRRKKGYERLDGSGRRHKIPVVELGALGSSHKRRFSWKVKIKPKLR 180
           E+E VS      S W RK GY RL+GSGRR     VEL  LGS+ +RRF W+  IKPKLR
Sbjct: 2   EVESVSVFRGLRSFWARKGGYVRLNGSGRRKNR--VELARLGSNRRRRF-WR--IKPKLR 56

Query: 181 FLNLCSPKKFLTRLRDGYVNMMLGFANSRVFTNG-SGYNGNETIDNGLRRAPAKEYDERM 357
           F  + SPKKF   LRD YV MMLGFANSRV ++G SG  G+     G  + P KEYDE+M
Sbjct: 57  FFRIPSPKKFFIWLRDAYVKMMLGFANSRVMSSGYSGVLGDGI--GGFGQRPPKEYDEKM 114

Query: 358 LIEIYKAL-MAQGQLVSRD 411
           +IEIY++L MAQG L  RD
Sbjct: 115 IIEIYRSLVMAQG-LAPRD 132


>ref|XP_002320323.1| predicted protein [Populus trichocarpa] gi|222861096|gb|EEE98638.1|
           predicted protein [Populus trichocarpa]
          Length = 148

 Score =  116 bits (290), Expect = 3e-24
 Identities = 71/140 (50%), Positives = 90/140 (64%), Gaps = 8/140 (5%)
 Frame = +1

Query: 19  MEGVSASSWRRKKGY------ERLDGSGRRHKIPVVELGALGSSHKRR-FSWKVKIKPKL 177
           MEG+SAS + + KGY      ER++GSGR  +   VELG+  S+ + R FS ++KIKPKL
Sbjct: 1   MEGISASMYTKMKGYWSRRGYERINGSGRIRRKRPVELGSGSSTSRGRGFSLRIKIKPKL 60

Query: 178 RFLNLCSPKKFLTRLRDGYVNMMLGFANSRVFTNGSGYNGNETIDNGLRRAPAKEYDERM 357
           + L + SP+KF   LRD YV MMLG ANSR     SGY      D    R P KEYDE+M
Sbjct: 61  KILKMSSPRKFFVWLRDAYVKMMLGLANSRAI-GTSGYG-----DAFGARRPIKEYDEKM 114

Query: 358 LIEIYKAL-MAQGQLVSRDA 414
           +++IYK+L M QGQLV  DA
Sbjct: 115 IVQIYKSLVMTQGQLVPHDA 134


>ref|XP_003535999.1| PREDICTED: uncharacterized protein LOC100806979 [Glycine max]
          Length = 153

 Score =  113 bits (282), Expect = 3e-23
 Identities = 68/148 (45%), Positives = 93/148 (62%), Gaps = 16/148 (10%)
 Frame = +1

Query: 19  MEGVSASSWR------RKKGYERLDGSGRRHKIPVVELGALGSSHKRRFSWKVKIKPKLR 180
           MEG++AS  R      R+KGY++L+GSGRR +  V ELG+  +   R + W++++ PK+R
Sbjct: 1   MEGITASVCRGVKDYWRRKGYKKLNGSGRRRRNRV-ELGSTRTGKGRFWRWRIRLAPKIR 59

Query: 181 FLNLCSPKKFLTRLRDGYVNMMLGFANSRVFT----NGSGYNG-----NETIDNGLRRAP 333
              + SPKK L  +RD YV MMLG ANSRV T    + SG+ G       ++  G   AP
Sbjct: 60  IRKIPSPKKMLLWVRDAYVRMMLGLANSRVMTVNAASASGFGGALSGVGTSLGTGFGLAP 119

Query: 334 AKEYDERMLIEIYKA-LMAQGQLVSRDA 414
            KEYDE+ +I+IYK+ LMA G LVS DA
Sbjct: 120 PKEYDEKTIIQIYKSLLMAHGPLVSPDA 147


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