BLASTX nr result

ID: Coptis21_contig00028770 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00028770
         (262 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002302909.1| cc-nbs-lrr resistance protein [Populus trich...    79   3e-13
ref|XP_002335004.1| cc-nbs-lrr resistance protein [Populus trich...    77   2e-12
ref|XP_002302928.1| predicted protein [Populus trichocarpa] gi|2...    76   3e-12
ref|XP_002516740.1| leucine-rich repeat containing protein, puta...    74   1e-11
ref|XP_002302910.1| cc-nbs-lrr resistance protein [Populus trich...    73   3e-11

>ref|XP_002302909.1| cc-nbs-lrr resistance protein [Populus trichocarpa]
           gi|222844635|gb|EEE82182.1| cc-nbs-lrr resistance
           protein [Populus trichocarpa]
          Length = 1075

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 40/86 (46%), Positives = 56/86 (65%)
 Frame = +3

Query: 3   KEKLRSLDLQFSKERQDDAREENRKKIECVLDGLQPHANLVELHVRDYEGNKFPSWMMSS 182
           K  L SL L ++  R     +EN ++   VL+GLQPH+NL +L +  Y G++FP+WMM+ 
Sbjct: 713 KTALLSLTLSWNGNRTKSVIQENSEE---VLEGLQPHSNLKKLMIWGYGGSRFPNWMMNL 769

Query: 183 NTALPNLVLLELSCCNQCLELPALGR 260
           N  LPNLV +ELS C  C +LP LG+
Sbjct: 770 NMTLPNLVEMELSACPNCEQLPPLGK 795


>ref|XP_002335004.1| cc-nbs-lrr resistance protein [Populus trichocarpa]
           gi|222832589|gb|EEE71066.1| cc-nbs-lrr resistance
           protein [Populus trichocarpa]
          Length = 851

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 38/89 (42%), Positives = 56/89 (62%), Gaps = 5/89 (5%)
 Frame = +3

Query: 9   KLRSLDLQFSKERQDDAREENRKKI-----ECVLDGLQPHANLVELHVRDYEGNKFPSWM 173
           KL++  L  +     +   + RK +     E VL+GLQPH+NL +L +  Y G++FP+WM
Sbjct: 654 KLKTALLSLTLSWHGNGAPQQRKSVIQENNEEVLEGLQPHSNLKKLKIWGYGGSRFPNWM 713

Query: 174 MSSNTALPNLVLLELSCCNQCLELPALGR 260
           M+ N  LPNLV +ELS C+ C +LP LG+
Sbjct: 714 MNLNMTLPNLVEMELSACDHCEQLPPLGK 742


>ref|XP_002302928.1| predicted protein [Populus trichocarpa] gi|222844654|gb|EEE82201.1|
           predicted protein [Populus trichocarpa]
          Length = 475

 Score = 76.3 bits (186), Expect = 3e-12
 Identities = 35/74 (47%), Positives = 52/74 (70%)
 Frame = +3

Query: 39  KERQDDAREENRKKIECVLDGLQPHANLVELHVRDYEGNKFPSWMMSSNTALPNLVLLEL 218
           ++R+   +E N +    VL+GLQPH+NL +L +  Y G++FP+WMM+ N  LPNLV +EL
Sbjct: 124 QQRKSVIQENNEE----VLEGLQPHSNLKKLRICGYGGSRFPNWMMNLNMTLPNLVEMEL 179

Query: 219 SCCNQCLELPALGR 260
           S C+ C +LP LG+
Sbjct: 180 SACDHCEQLPPLGK 193


>ref|XP_002516740.1| leucine-rich repeat containing protein, putative [Ricinus communis]
           gi|223544113|gb|EEF45638.1| leucine-rich repeat
           containing protein, putative [Ricinus communis]
          Length = 1104

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 40/85 (47%), Positives = 56/85 (65%)
 Frame = +3

Query: 3   KEKLRSLDLQFSKERQDDAREENRKKIECVLDGLQPHANLVELHVRDYEGNKFPSWMMSS 182
           KE L+SL L +S+E +D +        E VLDG QPH+NL +L +R Y+G+KF SWM  +
Sbjct: 712 KEDLKSLSLCWSREGEDSSNLS-----EEVLDGCQPHSNLKKLSIRKYQGSKFASWM--T 764

Query: 183 NTALPNLVLLELSCCNQCLELPALG 257
           + +LPNLV +EL  C++C  LP  G
Sbjct: 765 DLSLPNLVEIELVDCDRCEHLPPFG 789


>ref|XP_002302910.1| cc-nbs-lrr resistance protein [Populus trichocarpa]
           gi|222844636|gb|EEE82183.1| cc-nbs-lrr resistance
           protein [Populus trichocarpa]
          Length = 1131

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 35/73 (47%), Positives = 48/73 (65%)
 Frame = +3

Query: 42  ERQDDAREENRKKIECVLDGLQPHANLVELHVRDYEGNKFPSWMMSSNTALPNLVLLELS 221
           +R+    +EN ++   VLDGLQP + L  L +  Y G+KFP+WMM+ N  LPNLV +ELS
Sbjct: 734 QRRKSVIQENNEE---VLDGLQPPSKLKRLRILGYRGSKFPNWMMNLNMTLPNLVEMELS 790

Query: 222 CCNQCLELPALGR 260
            C  C +LP LG+
Sbjct: 791 ACANCDQLPPLGK 803


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