BLASTX nr result

ID: Coptis21_contig00028765 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00028765
         (467 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002310080.1| glycosyl hydrolase family 9 [Populus trichoc...   202   2e-50
gb|AFZ78644.1| korrigan [Populus tomentosa]                           201   5e-50
emb|CBI27137.3| unnamed protein product [Vitis vinifera]              197   6e-49
ref|XP_002277177.2| PREDICTED: LOW QUALITY PROTEIN: endoglucanas...   196   2e-48
ref|XP_002527135.1| endo-1,4-beta-glucanase, putative [Ricinus c...   189   2e-46

>ref|XP_002310080.1| glycosyl hydrolase family 9 [Populus trichocarpa]
           gi|222852983|gb|EEE90530.1| glycosyl hydrolase family 9
           [Populus trichocarpa] gi|347466591|gb|AEO97208.1|
           endo-1,4-beta-glucanase [Populus trichocarpa]
           gi|347466645|gb|AEO97235.1| endo-1,4-beta-glucanase
           [Populus trichocarpa]
          Length = 611

 Score =  202 bits (515), Expect = 2e-50
 Identities = 98/155 (63%), Positives = 112/155 (72%)
 Frame = +2

Query: 2   FEKWYSQKEGNPNVIFGALVGGPDSKDEFSDERYNYEQTEPTISGTAPLVGIFSKLHXXX 181
           FEKWY + EGNPNVI GALVGGPD  D FSD+R NYEQTEPT+SG APLVG+FSKL    
Sbjct: 435 FEKWYRRPEGNPNVIHGALVGGPDQNDNFSDDRSNYEQTEPTLSGCAPLVGLFSKLQTPV 494

Query: 182 XXXXXXXXXXKESPVIQHPRSKVPVAFLHSITDTWTVGQSTYYRHKVNIKNISLKPITQL 361
                     +     +  RS  PV FLHSIT TWTVG +TYYRHKV IKN S KPI  L
Sbjct: 495 PRPTTPHSYQETQKTQEPYRSHAPVEFLHSITKTWTVGPTTYYRHKVIIKNKSEKPIKDL 554

Query: 362 KLLIENLSGSLWGLSPTPEKNTYEFPQWLKTLKPG 466
           KL+IE+LSGS+WGL+PT ++NTYE PQW K L+PG
Sbjct: 555 KLVIEDLSGSIWGLNPTQQRNTYELPQWQKVLQPG 589


>gb|AFZ78644.1| korrigan [Populus tomentosa]
          Length = 611

 Score =  201 bits (511), Expect = 5e-50
 Identities = 96/155 (61%), Positives = 112/155 (72%)
 Frame = +2

Query: 2   FEKWYSQKEGNPNVIFGALVGGPDSKDEFSDERYNYEQTEPTISGTAPLVGIFSKLHXXX 181
           FEKWY + EGNPNVI GALVGGPD  D FSD+R NYEQTEPT+SG APLVG+FSKL    
Sbjct: 435 FEKWYRRPEGNPNVIHGALVGGPDQNDNFSDDRSNYEQTEPTLSGCAPLVGLFSKLQTPV 494

Query: 182 XXXXXXXXXXKESPVIQHPRSKVPVAFLHSITDTWTVGQSTYYRHKVNIKNISLKPITQL 361
                     +     +  RS+ PV FLHSIT TWTVG +TYYRH+V IKN S KPI  L
Sbjct: 495 PRPTTPHSYQETQKTQEPYRSQAPVEFLHSITKTWTVGPTTYYRHRVIIKNKSEKPIKDL 554

Query: 362 KLLIENLSGSLWGLSPTPEKNTYEFPQWLKTLKPG 466
           KL++E LSGS+WGL+PT ++NTYE PQW K L+PG
Sbjct: 555 KLVVEGLSGSVWGLNPTQQRNTYELPQWQKVLQPG 589


>emb|CBI27137.3| unnamed protein product [Vitis vinifera]
          Length = 615

 Score =  197 bits (502), Expect = 6e-49
 Identities = 97/160 (60%), Positives = 114/160 (71%), Gaps = 5/160 (3%)
 Frame = +2

Query: 2   FEKWYSQKEGNPNVIFGALVGGPDSKDEFSDERYNYEQTEPTISGTAPLVGIFSKLHXXX 181
           FE WY + E NPNVI+G LVGGPD  D FSD+R NYEQTEPT+SG APLVG+FSKL    
Sbjct: 437 FESWYHRPEANPNVIYGGLVGGPDKNDGFSDDRSNYEQTEPTLSGGAPLVGLFSKLQSLI 496

Query: 182 XXXXXXXXXXKESPVIQHPRSK-----VPVAFLHSITDTWTVGQSTYYRHKVNIKNISLK 346
                     ++SP   H  +      VPV F+H IT+TWT+G++TYYRHKV IKN S K
Sbjct: 497 GTSGSHS---QKSPAPHHQNTPIIYADVPVEFIHFITNTWTIGRTTYYRHKVIIKNKSQK 553

Query: 347 PITQLKLLIENLSGSLWGLSPTPEKNTYEFPQWLKTLKPG 466
           PIT LKL IENLSG+LWGL+P  EKNTYE PQW+K L+PG
Sbjct: 554 PITDLKLAIENLSGTLWGLNPCQEKNTYELPQWMKVLQPG 593


>ref|XP_002277177.2| PREDICTED: LOW QUALITY PROTEIN: endoglucanase 5-like [Vitis
           vinifera]
          Length = 611

 Score =  196 bits (498), Expect = 2e-48
 Identities = 96/155 (61%), Positives = 114/155 (73%)
 Frame = +2

Query: 2   FEKWYSQKEGNPNVIFGALVGGPDSKDEFSDERYNYEQTEPTISGTAPLVGIFSKLHXXX 181
           FE WY + E NPNVI+G LVGGPD  D FSD+R NYEQTEPT+SG APLVG+FSKL    
Sbjct: 437 FESWYHRPEANPNVIYGGLVGGPDKNDGFSDDRSNYEQTEPTLSGGAPLVGLFSKLQSLI 496

Query: 182 XXXXXXXXXXKESPVIQHPRSKVPVAFLHSITDTWTVGQSTYYRHKVNIKNISLKPITQL 361
                     + +   +  +S VPV F+H IT+TWT+G++TYYRHKV IKN S KPIT L
Sbjct: 497 GTSGWLXSNTQXNG--KPFKSDVPVEFIHFITNTWTIGRTTYYRHKVIIKNKSQKPITDL 554

Query: 362 KLLIENLSGSLWGLSPTPEKNTYEFPQWLKTLKPG 466
           KL IENLSG+LWGL+P  EKNTYE PQW+K L+PG
Sbjct: 555 KLAIENLSGTLWGLNPCQEKNTYELPQWMKVLQPG 589


>ref|XP_002527135.1| endo-1,4-beta-glucanase, putative [Ricinus communis]
           gi|223533495|gb|EEF35237.1| endo-1,4-beta-glucanase,
           putative [Ricinus communis]
          Length = 620

 Score =  189 bits (481), Expect = 2e-46
 Identities = 98/166 (59%), Positives = 113/166 (68%), Gaps = 11/166 (6%)
 Frame = +2

Query: 2   FEKWYSQKEGNPNVIFGALVGGPDSKDEFSDERYNYEQTEPTISGTAPLVGIFSKLHXXX 181
           FE WY + E NPN+I+GALVGGPD  D FSD+R NYEQTEP +SG APLVG+FSKL    
Sbjct: 436 FETWYHRTEANPNIIYGALVGGPDQNDNFSDDRSNYEQTEPALSGCAPLVGLFSKLQSLS 495

Query: 182 XXXXXXXXXXKES--PVIQHPRSK---------VPVAFLHSITDTWTVGQSTYYRHKVNI 328
                     KES  P    P  K         VPV F+HSITDTW++G++TYYRHKV I
Sbjct: 496 EATGYYG---KESSVPHTTKPGKKHFFPKRNKNVPVEFVHSITDTWSIGETTYYRHKVII 552

Query: 329 KNISLKPITQLKLLIENLSGSLWGLSPTPEKNTYEFPQWLKTLKPG 466
           KN S K I  LKL+I++LSGS+WGLSPT E NTYE PQW K LKPG
Sbjct: 553 KNKSQKSIEDLKLVIQDLSGSIWGLSPTKEHNTYELPQWHKGLKPG 598


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