BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00028755
         (1021 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275491.1| PREDICTED: pentatricopeptide repeat-containi...   321   2e-85
ref|XP_004139715.1| PREDICTED: pentatricopeptide repeat-containi...   300   3e-79
ref|XP_003548443.1| PREDICTED: pentatricopeptide repeat-containi...   281   2e-73
ref|XP_002320827.1| predicted protein [Populus trichocarpa] gi|2...   279   7e-73
ref|XP_002511921.1| pentatricopeptide repeat-containing protein,...   276   6e-72

>ref|XP_002275491.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
            mitochondrial [Vitis vinifera]
            gi|297745328|emb|CBI40408.3| unnamed protein product
            [Vitis vinifera]
          Length = 765

 Score =  321 bits (823), Expect = 2e-85
 Identities = 152/232 (65%), Positives = 194/232 (83%)
 Frame = -2

Query: 1017 SRAGRLDDACSVASKMKSKGFFLDAMSYNVLISGFCKKNKLSKVHEILNDMELSGVRPDQ 838
            S+AG+LD A  V SKMK  GF  D +S+NVLI+GFC+KNKL + +E+L +ME +G++PD 
Sbjct: 532  SQAGKLDRASFVLSKMKEAGFSPDIVSFNVLINGFCRKNKLDEAYEMLKEMENAGIKPDG 591

Query: 837  ITYNTLIGSFSKSGNFKTVHQVMTKMTEQGLVPTVVTFGAVIHGYCKVGKLNKALEIFRR 658
            +TYNTLI  FSK+G+F T H++M KM ++GLVPTVVT+GA+IH YC  G L++A++IFR 
Sbjct: 592  VTYNTLISHFSKTGDFSTAHRLMKKMVKEGLVPTVVTYGALIHAYCLNGNLDEAMKIFRD 651

Query: 657  MGSTSKVPPNTVIYNILIDSLCKEKKIKDAVALMDDMKVKGVLPNVITYNAMFRGLQEEK 478
            M STSKVPPNTVIYNILI+SLC++ ++  A++LMDDMKVKGV PN  T+NAMF+GLQE+ 
Sbjct: 652  MSSTSKVPPNTVIYNILINSLCRKNQVDLALSLMDDMKVKGVKPNTNTFNAMFKGLQEKN 711

Query: 477  WLDKAYKLMDEMNEQACNPDYVTMEILTEWLSAVGETARLKSFVKGYEVAFS 322
            WL KA++LMD M E ACNPDY+TMEILTEWLSAVGETA+LKSFV+GYEV+ S
Sbjct: 712  WLSKAFELMDRMTEHACNPDYITMEILTEWLSAVGETAKLKSFVQGYEVSAS 763



 Score =  120 bits (302), Expect = 4e-25
 Identities = 63/225 (28%), Positives = 113/225 (50%), Gaps = 1/225 (0%)
 Frame = -2

Query: 1014 RAGRLDDACSVASKMKSKGFFL-DAMSYNVLISGFCKKNKLSKVHEILNDMELSGVRPDQ 838
            + GR ++   +  +M+S+   + + ++YN LI G+CK + +    E+ + M   GV P+ 
Sbjct: 392  KVGRQEEGLGLVERMRSQPRCMPNTVTYNCLIDGYCKASMIEAARELFDQMNKDGVPPNV 451

Query: 837  ITYNTLIGSFSKSGNFKTVHQVMTKMTEQGLVPTVVTFGAVIHGYCKVGKLNKALEIFRR 658
            +T NTL+    K G      +   +M  +GL    VT+ A+I  +C V  + KA+E+F  
Sbjct: 452  VTLNTLVDGMCKHGRINGAVEFFNEMQGKGLKGNAVTYTALIRAFCNVNNIEKAMELFDE 511

Query: 657  MGSTSKVPPNTVIYNILIDSLCKEKKIKDAVALMDDMKVKGVLPNVITYNAMFRGLQEEK 478
            M   +   P+ ++Y  LI  L +  K+  A  ++  MK  G  P+++++N +  G   + 
Sbjct: 512  M-LEAGCSPDAIVYYTLISGLSQAGKLDRASFVLSKMKEAGFSPDIVSFNVLINGFCRKN 570

Query: 477  WLDKAYKLMDEMNEQACNPDYVTMEILTEWLSAVGETARLKSFVK 343
             LD+AY+++ EM      PD VT   L    S  G+ +     +K
Sbjct: 571  KLDEAYEMLKEMENAGIKPDGVTYNTLISHFSKTGDFSTAHRLMK 615



 Score =  112 bits (279), Expect = 2e-22
 Identities = 82/273 (30%), Positives = 119/273 (43%), Gaps = 42/273 (15%)
 Frame = -2

Query: 1014 RAGRLDDACSVASKMKSKGFFLDAMSYNVLISGFCKKNKLSKVHEILNDMELSGVRPDQI 835
            R+GR D A  V   +   G  ++A S N L++   +  +  +++ +L +M+   ++P+ +
Sbjct: 282  RSGRTDRAWDVLHGLMKLGGVMEAASCNALLTALGRAREFKRMNTLLAEMKEMDIQPNVV 341

Query: 834  TYNTLIGSFSKSGNFKTVHQVMTKMT---EQGLV--PTVVTFGAVIHGYCKVGKLNKALE 670
            T+  LI    K        +V  KM      G +  P V+T+  +I G CKVG+  + L 
Sbjct: 342  TFGILINHLCKFRRVDEALEVFEKMNGGESNGFLVEPDVITYNTLIDGLCKVGRQEEGLG 401

Query: 669  IFRRMGSTSKVPPNTVIYNILIDSLCKEKKIKDAVALMDDMKVKGVLPNV---------- 520
            +  RM S  +  PNTV YN LID  CK   I+ A  L D M   GV PNV          
Sbjct: 402  LVERMRSQPRCMPNTVTYNCLIDGYCKASMIEAARELFDQMNKDGVPPNVVTLNTLVDGM 461

Query: 519  -------------------------ITYNAMFRGLQEEKWLDKAYKLMDEMNEQACNPDY 415
                                     +TY A+ R       ++KA +L DEM E  C+PD 
Sbjct: 462  CKHGRINGAVEFFNEMQGKGLKGNAVTYTALIRAFCNVNNIEKAMELFDEMLEAGCSPDA 521

Query: 414  VTMEILTEWLSAVGETARLKSFV--KGYEVAFS 322
            +    L   LS  G+  R  SFV  K  E  FS
Sbjct: 522  IVYYTLISGLSQAGKLDR-ASFVLSKMKEAGFS 553



 Score =  108 bits (270), Expect = 2e-21
 Identities = 62/220 (28%), Positives = 118/220 (53%), Gaps = 6/220 (2%)
 Frame = -2

Query: 1014 RAGRLDDACSVASKMKSKGFFLDAMSYNVLISGFCKKNKLSKVHEILND-MELSGVRPDQ 838
            RA   ++   + SK      F +++    LIS  C+  +  +  ++L+  M+L GV  + 
Sbjct: 247  RAVDEEEIVGLVSKFAEHEVFPNSIWLTQLISRLCRSGRTDRAWDVLHGLMKLGGVM-EA 305

Query: 837  ITYNTLIGSFSKSGNFKTVHQVMTKMTEQGLVPTVVTFGAVIHGYCKVGKLNKALEIFRR 658
             + N L+ +  ++  FK ++ ++ +M E  + P VVTFG +I+  CK  ++++ALE+F +
Sbjct: 306  ASCNALLTALGRAREFKRMNTLLAEMKEMDIQPNVVTFGILINHLCKFRRVDEALEVFEK 365

Query: 657  MGSTSK----VPPNTVIYNILIDSLCKEKKIKDAVALMDDMKVK-GVLPNVITYNAMFRG 493
            M         V P+ + YN LID LCK  + ++ + L++ M+ +   +PN +TYN +  G
Sbjct: 366  MNGGESNGFLVEPDVITYNTLIDGLCKVGRQEEGLGLVERMRSQPRCMPNTVTYNCLIDG 425

Query: 492  LQEEKWLDKAYKLMDEMNEQACNPDYVTMEILTEWLSAVG 373
              +   ++ A +L D+MN+    P+ VT+  L + +   G
Sbjct: 426  YCKASMIEAARELFDQMNKDGVPPNVVTLNTLVDGMCKHG 465



 Score =  103 bits (256), Expect = 9e-20
 Identities = 51/204 (25%), Positives = 106/204 (51%)
 Frame = -2

Query: 1020 FSRAGRLDDACSVASKMKSKGFFLDAMSYNVLISGFCKKNKLSKVHEILNDMELSGVRPD 841
            + +A  ++ A  +  +M   G   + ++ N L+ G CK  +++   E  N+M+  G++ +
Sbjct: 426  YCKASMIEAARELFDQMNKDGVPPNVVTLNTLVDGMCKHGRINGAVEFFNEMQGKGLKGN 485

Query: 840  QITYNTLIGSFSKSGNFKTVHQVMTKMTEQGLVPTVVTFGAVIHGYCKVGKLNKALEIFR 661
             +TY  LI +F    N +   ++  +M E G  P  + +  +I G  + GKL++A  +  
Sbjct: 486  AVTYTALIRAFCNVNNIEKAMELFDEMLEAGCSPDAIVYYTLISGLSQAGKLDRASFVLS 545

Query: 660  RMGSTSKVPPNTVIYNILIDSLCKEKKIKDAVALMDDMKVKGVLPNVITYNAMFRGLQEE 481
            +M   +   P+ V +N+LI+  C++ K+ +A  ++ +M+  G+ P+ +TYN +     + 
Sbjct: 546  KM-KEAGFSPDIVSFNVLINGFCRKNKLDEAYEMLKEMENAGIKPDGVTYNTLISHFSKT 604

Query: 480  KWLDKAYKLMDEMNEQACNPDYVT 409
                 A++LM +M ++   P  VT
Sbjct: 605  GDFSTAHRLMKKMVKEGLVPTVVT 628


>ref|XP_004139715.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
            mitochondrial-like [Cucumis sativus]
            gi|449475521|ref|XP_004154479.1| PREDICTED:
            pentatricopeptide repeat-containing protein At3g61520,
            mitochondrial-like [Cucumis sativus]
          Length = 660

 Score =  300 bits (769), Expect = 3e-79
 Identities = 144/228 (63%), Positives = 182/228 (79%), Gaps = 2/228 (0%)
 Frame = -2

Query: 1017 SRAGRLDDACSVASKMKSKGFFLDAMSYNVLISGFCKKNKLSKVHEILNDMELSGVRPDQ 838
            ++AGRLDDA SV SK+K  GF LD + YNVLIS FCKKNKL +  E LN+MEL+GV+PD 
Sbjct: 379  AQAGRLDDASSVVSKLKEAGFCLDRVCYNVLISEFCKKNKLDRAQEWLNEMELAGVKPDS 438

Query: 837  ITYNTLIGSFSKSGNFKTVHQVMTKMTEQ-GLVPTVVTFGAVIHGYCKVGKLNKALEIFR 661
            +TYNTLI  FSK GNFK  H+ M KMTE+ GL PTV T+GA+IH YC    +++A++IF+
Sbjct: 439  VTYNTLISYFSKIGNFKLAHKFMKKMTEEEGLSPTVFTYGALIHAYCLNNNIDEAIKIFK 498

Query: 660  RMGST-SKVPPNTVIYNILIDSLCKEKKIKDAVALMDDMKVKGVLPNVITYNAMFRGLQE 484
             M +  SKVPPNTVIYNILIDSLCK+ ++  A++L+DDMK +GV+PN  TYN++F+ L++
Sbjct: 499  EMNNVASKVPPNTVIYNILIDSLCKQTQVNFALSLLDDMKFRGVMPNTTTYNSIFKALRD 558

Query: 483  EKWLDKAYKLMDEMNEQACNPDYVTMEILTEWLSAVGETARLKSFVKG 340
            + WLDKA+KLMD M EQACNPDY+TMEILTEWLSAVGE  +LK F +G
Sbjct: 559  KNWLDKAFKLMDRMVEQACNPDYITMEILTEWLSAVGEITKLKKFTQG 606



 Score =  115 bits (287), Expect = 2e-23
 Identities = 63/224 (28%), Positives = 111/224 (49%)
 Frame = -2

Query: 1014 RAGRLDDACSVASKMKSKGFFLDAMSYNVLISGFCKKNKLSKVHEILNDMELSGVRPDQI 835
            + GR ++A  +  KM+S        ++N LI+G+C+  ++   H++ N+ME + + P+ I
Sbjct: 240  KVGRQEEALCLMGKMRSDQCAPTTATFNCLINGYCRSGEIEVAHKLFNEMENAQIEPNVI 299

Query: 834  TYNTLIGSFSKSGNFKTVHQVMTKMTEQGLVPTVVTFGAVIHGYCKVGKLNKALEIFRRM 655
            T NTL+    K     T  +    M ++GL    VT+   I+ +C V  +NKA+E    M
Sbjct: 300  TLNTLVDGMCKHNRISTAVEFFRVMQQKGLKGNNVTYTVFINAFCNVNNMNKAMEFLDEM 359

Query: 654  GSTSKVPPNTVIYNILIDSLCKEKKIKDAVALMDDMKVKGVLPNVITYNAMFRGLQEEKW 475
             S     P+ V+Y  LI  L +  ++ DA +++  +K  G   + + YN +     ++  
Sbjct: 360  -SKDGCFPDAVVYYTLICGLAQAGRLDDASSVVSKLKEAGFCLDRVCYNVLISEFCKKNK 418

Query: 474  LDKAYKLMDEMNEQACNPDYVTMEILTEWLSAVGETARLKSFVK 343
            LD+A + ++EM      PD VT   L  + S +G       F+K
Sbjct: 419  LDRAQEWLNEMELAGVKPDSVTYNTLISYFSKIGNFKLAHKFMK 462



 Score =  112 bits (281), Expect = 1e-22
 Identities = 60/208 (28%), Positives = 104/208 (50%), Gaps = 5/208 (2%)
 Frame = -2

Query: 999 DDACSVASKMKSKGFFLDAMSYNVLISGFCKKNKLSKVHEILNDMELSGVRPDQITYNTL 820
           D+   + SK      F D ++   LIS  C+    +    IL+++ +     D    N L
Sbjct: 99  DEIAGLVSKFGKHNIFPDTIALTQLISKLCRSGNTNLAWNILDNLMMLNGLKDAAPCNAL 158

Query: 819 IGSFSKSGNFKTVHQVMTKMTEQGLVPTVVTFGAVIHGYCKVGKLNKALEIFRRMGSTSK 640
           +    K+  F  ++ +M KM +  + PTV+TFG +I+  CK  +++ ALE+F +M    +
Sbjct: 159 LTGLGKAREFGKMNLLMRKMKDMNIQPTVITFGILINHLCKFRRIDDALEVFEKMKGEKE 218

Query: 639 -----VPPNTVIYNILIDSLCKEKKIKDAVALMDDMKVKGVLPNVITYNAMFRGLQEEKW 475
                V P+T++YN LID LCK  + ++A+ LM  M+     P   T+N +  G      
Sbjct: 219 ETKVFVAPDTIMYNTLIDGLCKVGRQEEALCLMGKMRSDQCAPTTATFNCLINGYCRSGE 278

Query: 474 LDKAYKLMDEMNEQACNPDYVTMEILTE 391
           ++ A+KL +EM      P+ +T+  L +
Sbjct: 279 IEVAHKLFNEMENAQIEPNVITLNTLVD 306



 Score =  112 bits (280), Expect = 1e-22
 Identities = 71/240 (29%), Positives = 109/240 (45%), Gaps = 6/240 (2%)
 Frame = -2

Query: 975 KMKSKGFFLDAMSYNVLISGFCKKNKLSKVHEILNDMELSG------VRPDQITYNTLIG 814
           KMK        +++ +LI+  CK  ++    E+   M+         V PD I YNTLI 
Sbjct: 177 KMKDMNIQPTVITFGILINHLCKFRRIDDALEVFEKMKGEKEETKVFVAPDTIMYNTLID 236

Query: 813 SFSKSGNFKTVHQVMTKMTEQGLVPTVVTFGAVIHGYCKVGKLNKALEIFRRMGSTSKVP 634
              K G  +    +M KM      PT  TF  +I+GYC+ G++  A ++F  M   +++ 
Sbjct: 237 GLCKVGRQEEALCLMGKMRSDQCAPTTATFNCLINGYCRSGEIEVAHKLFNEM-ENAQIE 295

Query: 633 PNTVIYNILIDSLCKEKKIKDAVALMDDMKVKGVLPNVITYNAMFRGLQEEKWLDKAYKL 454
           PN +  N L+D +CK  +I  AV     M+ KG+  N +TY            ++KA + 
Sbjct: 296 PNVITLNTLVDGMCKHNRISTAVEFFRVMQQKGLKGNNVTYTVFINAFCNVNNMNKAMEF 355

Query: 453 MDEMNEQACNPDYVTMEILTEWLSAVGETARLKSFVKGYEVAFSNIDRKKPAPKT*VCYS 274
           +DEM++  C PD V    L   L+  G      S V   + A   +DR        VCY+
Sbjct: 356 LDEMSKDGCFPDAVVYYTLICGLAQAGRLDDASSVVSKLKEAGFCLDR--------VCYN 407



 Score =  105 bits (261), Expect = 2e-20
 Identities = 62/232 (26%), Positives = 106/232 (45%), Gaps = 6/232 (2%)
 Frame = -2

Query: 1005 RLDDACSVASKMK-----SKGFFL-DAMSYNVLISGFCKKNKLSKVHEILNDMELSGVRP 844
            R+DDA  V  KMK     +K F   D + YN LI G CK  +  +   ++  M      P
Sbjct: 202  RIDDALEVFEKMKGEKEETKVFVAPDTIMYNTLIDGLCKVGRQEEALCLMGKMRSDQCAP 261

Query: 843  DQITYNTLIGSFSKSGNFKTVHQVMTKMTEQGLVPTVVTFGAVIHGYCKVGKLNKALEIF 664
               T+N LI  + +SG  +  H++  +M    + P V+T   ++ G CK  +++ A+E F
Sbjct: 262  TTATFNCLINGYCRSGEIEVAHKLFNEMENAQIEPNVITLNTLVDGMCKHNRISTAVEFF 321

Query: 663  RRMGSTSKVPPNTVIYNILIDSLCKEKKIKDAVALMDDMKVKGVLPNVITYNAMFRGLQE 484
            R M     +  N V Y + I++ C    +  A+  +D+M   G  P+ + Y  +  GL +
Sbjct: 322  RVM-QQKGLKGNNVTYTVFINAFCNVNNMNKAMEFLDEMSKDGCFPDAVVYYTLICGLAQ 380

Query: 483  EKWLDKAYKLMDEMNEQACNPDYVTMEILTEWLSAVGETARLKSFVKGYEVA 328
               LD A  ++ ++ E     D V   +L        +  R + ++   E+A
Sbjct: 381  AGRLDDASSVVSKLKEAGFCLDRVCYNVLISEFCKKNKLDRAQEWLNEMELA 432



 Score = 95.5 bits (236), Expect = 2e-17
 Identities = 49/196 (25%), Positives = 100/196 (51%)
 Frame = -2

Query: 1020 FSRAGRLDDACSVASKMKSKGFFLDAMSYNVLISGFCKKNKLSKVHEILNDMELSGVRPD 841
            + R+G ++ A  + ++M++     + ++ N L+ G CK N++S   E    M+  G++ +
Sbjct: 273  YCRSGEIEVAHKLFNEMENAQIEPNVITLNTLVDGMCKHNRISTAVEFFRVMQQKGLKGN 332

Query: 840  QITYNTLIGSFSKSGNFKTVHQVMTKMTEQGLVPTVVTFGAVIHGYCKVGKLNKALEIFR 661
             +TY   I +F    N     + + +M++ G  P  V +  +I G  + G+L+ A  +  
Sbjct: 333  NVTYTVFINAFCNVNNMNKAMEFLDEMSKDGCFPDAVVYYTLICGLAQAGRLDDASSVVS 392

Query: 660  RMGSTSKVPPNTVIYNILIDSLCKEKKIKDAVALMDDMKVKGVLPNVITYNAMFRGLQEE 481
            ++   +    + V YN+LI   CK+ K+  A   +++M++ GV P+ +TYN +     + 
Sbjct: 393  KL-KEAGFCLDRVCYNVLISEFCKKNKLDRAQEWLNEMELAGVKPDSVTYNTLISYFSKI 451

Query: 480  KWLDKAYKLMDEMNEQ 433
                 A+K M +M E+
Sbjct: 452  GNFKLAHKFMKKMTEE 467


>ref|XP_003548443.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
            mitochondrial-like [Glycine max]
          Length = 746

 Score =  281 bits (718), Expect = 2e-73
 Identities = 133/226 (58%), Positives = 175/226 (77%)
 Frame = -2

Query: 1011 AGRLDDACSVASKMKSKGFFLDAMSYNVLISGFCKKNKLSKVHEILNDMELSGVRPDQIT 832
            AGR++DA  V SK+K  GF LD   YNVLISGFCKK KL +V+E+L +ME +GV+PD IT
Sbjct: 511  AGRMNDASVVVSKLKLAGFSLDRSCYNVLISGFCKKKKLERVYELLTEMEETGVKPDTIT 570

Query: 831  YNTLIGSFSKSGNFKTVHQVMTKMTEQGLVPTVVTFGAVIHGYCKVGKLNKALEIFRRMG 652
            YNTLI    K+G+F T  +VM KM ++GL P+VVT+GA+IH YC    +++ ++IF  M 
Sbjct: 571  YNTLISYLGKTGDFATASKVMEKMIKEGLRPSVVTYGAIIHAYCSKKNVDEGMKIFGEMC 630

Query: 651  STSKVPPNTVIYNILIDSLCKEKKIKDAVALMDDMKVKGVLPNVITYNAMFRGLQEEKWL 472
            STSKVPPNTVIYNILID+LC+   +  A++LM+DMKVK V PN  TYNA+ +G++++K L
Sbjct: 631  STSKVPPNTVIYNILIDALCRNNDVDRAISLMEDMKVKRVRPNTTTYNAILKGVRDKKML 690

Query: 471  DKAYKLMDEMNEQACNPDYVTMEILTEWLSAVGETARLKSFVKGYE 334
             KA++LMD M E+AC PDY+TME+LTEWLSAVGE  +LK FV+GY+
Sbjct: 691  HKAFELMDRMVEEACRPDYITMEVLTEWLSAVGEIEKLKHFVEGYQ 736



 Score =  120 bits (302), Expect = 4e-25
 Identities = 67/218 (30%), Positives = 109/218 (50%), Gaps = 1/218 (0%)
 Frame = -2

Query: 1014 RAGRLDDACSVASKMKSKGFFL-DAMSYNVLISGFCKKNKLSKVHEILNDMELSGVRPDQ 838
            + G+ +D  S+  +MK       + ++YN LI GF K     + HE+   M   GV+P+ 
Sbjct: 369  KVGKEEDGLSLLEEMKMGNINRPNTVTYNCLIDGFFKAGNFDRAHELFRQMNEEGVQPNV 428

Query: 837  ITYNTLIGSFSKSGNFKTVHQVMTKMTEQGLVPTVVTFGAVIHGYCKVGKLNKALEIFRR 658
            IT NTL+    K G      +   +M  +GL     T+ A+I  +C V  +N+A++ F  
Sbjct: 429  ITLNTLVDGLCKHGRVHRAVEFFNEMKGKGLKGNAATYTALISAFCGVNNINRAMQCFEE 488

Query: 657  MGSTSKVPPNTVIYNILIDSLCKEKKIKDAVALMDDMKVKGVLPNVITYNAMFRGLQEEK 478
            M S S   P+ V+Y  LI  LC   ++ DA  ++  +K+ G   +   YN +  G  ++K
Sbjct: 489  MLS-SGCSPDAVVYYSLISGLCIAGRMNDASVVVSKLKLAGFSLDRSCYNVLISGFCKKK 547

Query: 477  WLDKAYKLMDEMNEQACNPDYVTMEILTEWLSAVGETA 364
             L++ Y+L+ EM E    PD +T   L  +L   G+ A
Sbjct: 548  KLERVYELLTEMEETGVKPDTITYNTLISYLGKTGDFA 585



 Score =  114 bits (286), Expect = 3e-23
 Identities = 61/222 (27%), Positives = 118/222 (53%), Gaps = 6/222 (2%)
 Frame = -2

Query: 996 DACSVASKMKSKGFFLDAMSYNVLISGFCKKNKLSKVHEILNDMELSGVRPDQITYNTLI 817
           +   + +K+  +G F D      L+   C   K     E+L+ +   G   D  + N L+
Sbjct: 229 EVVGLVAKLGERGVFPDGFKLTQLVGKLCGDQKNGVAWEVLHCVMRLGGAVDAASCNALL 288

Query: 816 GSFSKSGNFKTVHQVMTKMTEQGLVPTVVTFGAVIHGYCKVGKLNKALEIFRRM-----G 652
               +  + K +++++ +M ++ + P+VVTFG +++  CK  ++++AL++F R+      
Sbjct: 289 TWLGRGRDIKRMNELLAEMEKRKIRPSVVTFGILVNHLCKARRIDEALQVFDRLRGKGGS 348

Query: 651 STSKVPPNTVIYNILIDSLCKEKKIKDAVALMDDMKVKGV-LPNVITYNAMFRGLQEEKW 475
           +   V P+ V++N LID LCK  K +D ++L+++MK+  +  PN +TYN +  G  +   
Sbjct: 349 NWVGVEPDVVLFNTLIDGLCKVGKEEDGLSLLEEMKMGNINRPNTVTYNCLIDGFFKAGN 408

Query: 474 LDKAYKLMDEMNEQACNPDYVTMEILTEWLSAVGETARLKSF 349
            D+A++L  +MNE+   P+ +T+  L + L   G   R   F
Sbjct: 409 FDRAHELFRQMNEEGVQPNVITLNTLVDGLCKHGRVHRAVEF 450



 Score =  105 bits (263), Expect = 1e-20
 Identities = 58/204 (28%), Positives = 101/204 (49%)
 Frame = -2

Query: 1020 FSRAGRLDDACSVASKMKSKGFFLDAMSYNVLISGFCKKNKLSKVHEILNDMELSGVRPD 841
            F +AG  D A  +  +M  +G   + ++ N L+ G CK  ++ +  E  N+M+  G++ +
Sbjct: 403  FFKAGNFDRAHELFRQMNEEGVQPNVITLNTLVDGLCKHGRVHRAVEFFNEMKGKGLKGN 462

Query: 840  QITYNTLIGSFSKSGNFKTVHQVMTKMTEQGLVPTVVTFGAVIHGYCKVGKLNKALEIFR 661
              TY  LI +F    N     Q   +M   G  P  V + ++I G C  G++N A  +  
Sbjct: 463  AATYTALISAFCGVNNINRAMQCFEEMLSSGCSPDAVVYYSLISGLCIAGRMNDASVVVS 522

Query: 660  RMGSTSKVPPNTVIYNILIDSLCKEKKIKDAVALMDDMKVKGVLPNVITYNAMFRGLQEE 481
            ++   +    +   YN+LI   CK+KK++    L+ +M+  GV P+ ITYN +   L + 
Sbjct: 523  KL-KLAGFSLDRSCYNVLISGFCKKKKLERVYELLTEMEETGVKPDTITYNTLISYLGKT 581

Query: 480  KWLDKAYKLMDEMNEQACNPDYVT 409
                 A K+M++M ++   P  VT
Sbjct: 582  GDFATASKVMEKMIKEGLRPSVVT 605



 Score = 99.8 bits (247), Expect = 1e-18
 Identities = 60/230 (26%), Positives = 109/230 (47%), Gaps = 7/230 (3%)
 Frame = -2

Query: 978 SKMKSKGFFLDAMSYNVLISGFCKKNKLSKVHEILNDMELSG------VRPDQITYNTLI 817
           ++M+ +      +++ +L++  CK  ++ +  ++ + +   G      V PD + +NTLI
Sbjct: 305 AEMEKRKIRPSVVTFGILVNHLCKARRIDEALQVFDRLRGKGGSNWVGVEPDVVLFNTLI 364

Query: 816 GSFSKSGNFKTVHQVMTKMTEQGLV-PTVVTFGAVIHGYCKVGKLNKALEIFRRMGSTSK 640
               K G  +    ++ +M    +  P  VT+  +I G+ K G  ++A E+FR+M     
Sbjct: 365 DGLCKVGKEEDGLSLLEEMKMGNINRPNTVTYNCLIDGFFKAGNFDRAHELFRQMNEEG- 423

Query: 639 VPPNTVIYNILIDSLCKEKKIKDAVALMDDMKVKGVLPNVITYNAMFRGLQEEKWLDKAY 460
           V PN +  N L+D LCK  ++  AV   ++MK KG+  N  TY A+         +++A 
Sbjct: 424 VQPNVITLNTLVDGLCKHGRVHRAVEFFNEMKGKGLKGNAATYTALISAFCGVNNINRAM 483

Query: 459 KLMDEMNEQACNPDYVTMEILTEWLSAVGETARLKSFVKGYEVAFSNIDR 310
           +  +EM    C+PD V    L   L   G        V   ++A  ++DR
Sbjct: 484 QCFEEMLSSGCSPDAVVYYSLISGLCIAGRMNDASVVVSKLKLAGFSLDR 533



 Score = 92.8 bits (229), Expect = 1e-16
 Identities = 61/206 (29%), Positives = 92/206 (44%), Gaps = 6/206 (2%)
 Frame = -2

Query: 960 GFFLDAMSYNVLISGFCKKNKLSKVHEILNDMELSGVRPDQITYNTLIGSFSKSGNFKTV 781
           G  +DA S N L++   +   + +++E+L +ME   +RP  +T+  L+    K+      
Sbjct: 276 GGAVDAASCNALLTWLGRGRDIKRMNELLAEMEKRKIRPSVVTFGILVNHLCKARRIDEA 335

Query: 780 HQVMTKMTEQG------LVPTVVTFGAVIHGYCKVGKLNKALEIFRRMGSTSKVPPNTVI 619
            QV  ++  +G      + P VV F  +I G CKVGK    L +   M   +   PNTV 
Sbjct: 336 LQVFDRLRGKGGSNWVGVEPDVVLFNTLIDGLCKVGKEEDGLSLLEEMKMGNINRPNTVT 395

Query: 618 YNILIDSLCKEKKIKDAVALMDDMKVKGVLPNVITYNAMFRGLQEEKWLDKAYKLMDEMN 439
           YN LID   K      A  L   M  +GV PNVIT N +  GL +   + +A +  +EM 
Sbjct: 396 YNCLIDGFFKAGNFDRAHELFRQMNEEGVQPNVITLNTLVDGLCKHGRVHRAVEFFNEMK 455

Query: 438 EQACNPDYVTMEILTEWLSAVGETAR 361
            +    +  T   L      V    R
Sbjct: 456 GKGLKGNAATYTALISAFCGVNNINR 481


>ref|XP_002320827.1| predicted protein [Populus trichocarpa] gi|222861600|gb|EEE99142.1|
            predicted protein [Populus trichocarpa]
          Length = 775

 Score =  279 bits (714), Expect = 7e-73
 Identities = 137/237 (57%), Positives = 176/237 (74%)
 Frame = -2

Query: 1020 FSRAGRLDDACSVASKMKSKGFFLDAMSYNVLISGFCKKNKLSKVHEILNDMELSGVRPD 841
            FS+AGR+ DA  V +++K  G   D + YN LI GFC+ NK  +V E+L +ME +G++PD
Sbjct: 534  FSQAGRMADASFVLAELKKLGIRPDTVCYNTLIGGFCRTNKFHRVFEMLKEMEEAGLKPD 593

Query: 840  QITYNTLIGSFSKSGNFKTVHQVMTKMTEQGLVPTVVTFGAVIHGYCKVGKLNKALEIFR 661
             ITYNTLI   SK+G+ K   +VM KM + G+VPTV T+GAVI+ YC  G  N+A+EIF+
Sbjct: 594  TITYNTLIAYASKNGDLKFAQKVMRKMIKAGVVPTVATYGAVINAYCLNGNGNEAMEIFK 653

Query: 660  RMGSTSKVPPNTVIYNILIDSLCKEKKIKDAVALMDDMKVKGVLPNVITYNAMFRGLQEE 481
             M + SKVPPNTVIYNILI+SLCK  K+K AV+LM+DMK+ GV PN  TYNA+F+GL++E
Sbjct: 654  DMKAASKVPPNTVIYNILINSLCKNNKVKSAVSLMEDMKIWGVTPNTTTYNAIFKGLRDE 713

Query: 480  KWLDKAYKLMDEMNEQACNPDYVTMEILTEWLSAVGETARLKSFVKGYEVAFSNIDR 310
            K L+K ++ MD M E ACNPDY+TMEILTEWLSAVGE  RLK FV G EV+ S   +
Sbjct: 714  KDLEKVFEFMDRMIEHACNPDYITMEILTEWLSAVGEIERLKKFVAGCEVSSSTAQK 770



 Score =  122 bits (305), Expect = 2e-25
 Identities = 61/216 (28%), Positives = 110/216 (50%), Gaps = 1/216 (0%)
 Frame = -2

Query: 1014 RAGRLDDACSVASKMKS-KGFFLDAMSYNVLISGFCKKNKLSKVHEILNDMELSGVRPDQ 838
            + GR  +   +  +M+S KG   D ++YN LI GFCK  ++ K  E+ ++M   GV P+ 
Sbjct: 395  KVGRQQEGLGLMERMRSQKGCAPDTITYNCLIDGFCKAGEIEKGKELFDEMNKEGVAPNV 454

Query: 837  ITYNTLIGSFSKSGNFKTVHQVMTKMTEQGLVPTVVTFGAVIHGYCKVGKLNKALEIFRR 658
            +T NTL+G   ++G   +      +   +G+    VT+ A+I+ +C V    KA+E+F  
Sbjct: 455  VTVNTLVGGMCRTGRVSSAVNFFVEAQRRGMKGDAVTYTALINAFCNVNNFEKAMELFNE 514

Query: 657  MGSTSKVPPNTVIYNILIDSLCKEKKIKDAVALMDDMKVKGVLPNVITYNAMFRGLQEEK 478
            M   S   P+ ++Y  LI    +  ++ DA  ++ ++K  G+ P+ + YN +  G     
Sbjct: 515  M-LKSGCSPDAIVYYTLISGFSQAGRMADASFVLAELKKLGIRPDTVCYNTLIGGFCRTN 573

Query: 477  WLDKAYKLMDEMNEQACNPDYVTMEILTEWLSAVGE 370
               + ++++ EM E    PD +T   L  + S  G+
Sbjct: 574  KFHRVFEMLKEMEEAGLKPDTITYNTLIAYASKNGD 609



 Score =  121 bits (303), Expect = 3e-25
 Identities = 67/225 (29%), Positives = 117/225 (52%), Gaps = 8/225 (3%)
 Frame = -2

Query: 999 DDACSVASKMKSKGFFLDAMSYNVLISGFCKKNKLSKVHEILNDMELSGVRPDQITYNTL 820
           D+  ++  K    G  + +     LI+  C+  K ++  ++  +M   G   +    N+L
Sbjct: 252 DEIVNLVLKFGEHGVLISSFWMGRLITRLCRNRKTNRGWDLFTEMIKLGAVLESAACNSL 311

Query: 819 IGSFSKSGNFKTVHQVMTKMTEQGLVPTVVTFGAVIHGYCKVGKLNKALEIFRRM----- 655
           +   ++ GNF  ++++M KM E  + P VVTFG +I+  CK  +++ ALE+  +M     
Sbjct: 312 LTGLAREGNFNRMNELMEKMVEMDIQPNVVTFGILINHMCKFRRVDDALEVLEKMSGGKE 371

Query: 654 --GSTSKVPPNTVIYNILIDSLCKEKKIKDAVALMDDMK-VKGVLPNVITYNAMFRGLQE 484
             G +  V P+ VIYN LID LCK  + ++ + LM+ M+  KG  P+ ITYN +  G  +
Sbjct: 372 SGGISVSVEPDVVIYNTLIDGLCKVGRQQEGLGLMERMRSQKGCAPDTITYNCLIDGFCK 431

Query: 483 EKWLDKAYKLMDEMNEQACNPDYVTMEILTEWLSAVGETARLKSF 349
              ++K  +L DEMN++   P+ VT+  L   +   G  +   +F
Sbjct: 432 AGEIEKGKELFDEMNKEGVAPNVVTVNTLVGGMCRTGRVSSAVNF 476



 Score =  102 bits (255), Expect = 1e-19
 Identities = 63/227 (27%), Positives = 104/227 (45%), Gaps = 9/227 (3%)
 Frame = -2

Query: 1017 SRAGRLDDACSVASKMKSKGFFLDAMSYNVLISGFCKKNKLSKVHEILNDM----ELSG- 853
            +R G  +    +  KM       + +++ +LI+  CK  ++    E+L  M    E  G 
Sbjct: 316  AREGNFNRMNELMEKMVEMDIQPNVVTFGILINHMCKFRRVDDALEVLEKMSGGKESGGI 375

Query: 852  ---VRPDQITYNTLIGSFSKSGNFKTVHQVMTKMTEQ-GLVPTVVTFGAVIHGYCKVGKL 685
               V PD + YNTLI    K G  +    +M +M  Q G  P  +T+  +I G+CK G++
Sbjct: 376  SVSVEPDVVIYNTLIDGLCKVGRQQEGLGLMERMRSQKGCAPDTITYNCLIDGFCKAGEI 435

Query: 684  NKALEIFRRMGSTSKVPPNTVIYNILIDSLCKEKKIKDAVALMDDMKVKGVLPNVITYNA 505
             K  E+F  M     V PN V  N L+  +C+  ++  AV    + + +G+  + +TY A
Sbjct: 436  EKGKELFDEMNKEG-VAPNVVTVNTLVGGMCRTGRVSSAVNFFVEAQRRGMKGDAVTYTA 494

Query: 504  MFRGLQEEKWLDKAYKLMDEMNEQACNPDYVTMEILTEWLSAVGETA 364
            +          +KA +L +EM +  C+PD +    L    S  G  A
Sbjct: 495  LINAFCNVNNFEKAMELFNEMLKSGCSPDAIVYYTLISGFSQAGRMA 541



 Score = 99.4 bits (246), Expect = 1e-18
 Identities = 64/243 (26%), Positives = 115/243 (47%), Gaps = 8/243 (3%)
 Frame = -2

Query: 978  SKMKSKGFFLDAMSYNVLISGFCKKNKLSKVHEILNDMELSGVRPDQITYNTLIGSFSKS 799
            ++M   G  L++ + N L++G  ++   ++++E++  M    ++P+ +T+  LI    K 
Sbjct: 294  TEMIKLGAVLESAACNSLLTGLAREGNFNRMNELMEKMVEMDIQPNVVTFGILINHMCKF 353

Query: 798  GNFKTVHQVMTKMT---EQGLV-----PTVVTFGAVIHGYCKVGKLNKALEIFRRMGSTS 643
                   +V+ KM+   E G +     P VV +  +I G CKVG+  + L +  RM S  
Sbjct: 354  RRVDDALEVLEKMSGGKESGGISVSVEPDVVIYNTLIDGLCKVGRQQEGLGLMERMRSQK 413

Query: 642  KVPPNTVIYNILIDSLCKEKKIKDAVALMDDMKVKGVLPNVITYNAMFRGLQEEKWLDKA 463
               P+T+ YN LID  CK  +I+    L D+M  +GV PNV+T N +  G+     +  A
Sbjct: 414  GCAPDTITYNCLIDGFCKAGEIEKGKELFDEMNKEGVAPNVVTVNTLVGGMCRTGRVSSA 473

Query: 462  YKLMDEMNEQACNPDYVTMEILTEWLSAVGETARLKSFVKGYEVAFSNIDRKKPAPKT*V 283
                 E   +    D VT      + + +     + +F K  E+ F+ + +   +P   V
Sbjct: 474  VNFFVEAQRRGMKGDAVT------YTALINAFCNVNNFEKAMEL-FNEMLKSGCSPDAIV 526

Query: 282  CYS 274
             Y+
Sbjct: 527  YYT 529



 Score = 95.1 bits (235), Expect = 2e-17
 Identities = 49/204 (24%), Positives = 96/204 (47%)
 Frame = -2

Query: 1020 FSRAGRLDDACSVASKMKSKGFFLDAMSYNVLISGFCKKNKLSKVHEILNDMELSGVRPD 841
            F +AG ++    +  +M  +G   + ++ N L+ G C+  ++S       + +  G++ D
Sbjct: 429  FCKAGEIEKGKELFDEMNKEGVAPNVVTVNTLVGGMCRTGRVSSAVNFFVEAQRRGMKGD 488

Query: 840  QITYNTLIGSFSKSGNFKTVHQVMTKMTEQGLVPTVVTFGAVIHGYCKVGKLNKALEIFR 661
             +TY  LI +F    NF+   ++  +M + G  P  + +  +I G+ + G++  A  +  
Sbjct: 489  AVTYTALINAFCNVNNFEKAMELFNEMLKSGCSPDAIVYYTLISGFSQAGRMADASFVLA 548

Query: 660  RMGSTSKVPPNTVIYNILIDSLCKEKKIKDAVALMDDMKVKGVLPNVITYNAMFRGLQEE 481
             +     + P+TV YN LI   C+  K      ++ +M+  G+ P+ ITYN +     + 
Sbjct: 549  ELKKLG-IRPDTVCYNTLIGGFCRTNKFHRVFEMLKEMEEAGLKPDTITYNTLIAYASKN 607

Query: 480  KWLDKAYKLMDEMNEQACNPDYVT 409
              L  A K+M +M +    P   T
Sbjct: 608  GDLKFAQKVMRKMIKAGVVPTVAT 631


>ref|XP_002511921.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223549101|gb|EEF50590.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 248

 Score =  276 bits (706), Expect = 6e-72
 Identities = 133/222 (59%), Positives = 171/222 (77%), Gaps = 1/222 (0%)
 Frame = -2

Query: 1017 SRAGRLDDACSVASKMKSKGFFLDAMSYNVLISGFCKKNKLSKVHEILNDMELSGVRPDQ 838
            S+A R+DDA SV +K+K  GF  D + YN+LI GFC KN+L K  E+LNDME +G+ PD 
Sbjct: 21   SQARRMDDAASVLTKLKEAGFCPDIVCYNILIGGFCNKNRLDKAREMLNDMEEAGLEPDT 80

Query: 837  ITYNTLIGSFSKSGNFKTVHQVMTKMTEQGLVPTVVTFGAVIHGYCKVGKLNKALEIFRR 658
            ITYNTLI  F K G+ K  H++M +M + GL PTVVT+G++IH YC  G +++A++IF+ 
Sbjct: 81   ITYNTLISYFGKIGDIKVAHRMMKQMIKDGLQPTVVTYGSLIHAYCLNGNVDEAMKIFKA 140

Query: 657  M-GSTSKVPPNTVIYNILIDSLCKEKKIKDAVALMDDMKVKGVLPNVITYNAMFRGLQEE 481
            M  + S+V PN VIYNILIDSLC+   I+ A++LMDDM+VKGV PN  TYNAMF+GL+E 
Sbjct: 141  MDAAASRVAPNNVIYNILIDSLCENNDIELALSLMDDMRVKGVKPNTGTYNAMFKGLRER 200

Query: 480  KWLDKAYKLMDEMNEQACNPDYVTMEILTEWLSAVGETARLK 355
            KWL++A +LMD M EQ CNPDY+TMEILTEWLSAVGET +LK
Sbjct: 201  KWLNQALELMDRMMEQPCNPDYITMEILTEWLSAVGETEKLK 242



 Score = 76.3 bits (186), Expect = 1e-11
 Identities = 49/159 (30%), Positives = 76/159 (47%), Gaps = 2/159 (1%)
 Frame = -2

Query: 855 GVRPDQITYNTLIGSFSKSGNFKTVHQVMTKMTEQGLVPTVVTFGAVIHGYCKVGKLNKA 676
           G  PD + Y  LI   S++        V+TK+ E G  P +V +  +I G+C   +L+KA
Sbjct: 5   GCTPDAMVYYKLISGLSQARRMDDAASVLTKLKEAGFCPDIVCYNILIGGFCNKNRLDKA 64

Query: 675 LEIFRRMGSTSKVPPNTVIYNILIDSLCKEKKIKDAVALMDDMKVKGVLPNVITYNAMFR 496
            E+   M   + + P+T+ YN LI    K   IK A  +M  M   G+ P V+TY ++  
Sbjct: 65  REMLNDM-EEAGLEPDTITYNTLISYFGKIGDIKVAHRMMKQMIKDGLQPTVVTYGSLIH 123

Query: 495 GLQEEKWLDKAYKLMDEMNEQACN--PDYVTMEILTEWL 385
                  +D+A K+   M+  A    P+ V   IL + L
Sbjct: 124 AYCLNGNVDEAMKIFKAMDAAASRVAPNNVIYNILIDSL 162



 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 24/88 (27%), Positives = 49/88 (55%)
 Frame = -2

Query: 633 PNTVIYNILIDSLCKEKKIKDAVALMDDMKVKGVLPNVITYNAMFRGLQEEKWLDKAYKL 454
           P+ ++Y  LI  L + +++ DA +++  +K  G  P+++ YN +  G   +  LDKA ++
Sbjct: 8   PDAMVYYKLISGLSQARRMDDAASVLTKLKEAGFCPDIVCYNILIGGFCNKNRLDKAREM 67

Query: 453 MDEMNEQACNPDYVTMEILTEWLSAVGE 370
           +++M E    PD +T   L  +   +G+
Sbjct: 68  LNDMEEAGLEPDTITYNTLISYFGKIGD 95



 Score = 56.6 bits (135), Expect = 9e-06
 Identities = 34/149 (22%), Positives = 64/149 (42%)
 Frame = -2

Query: 762 MTEQGLVPTVVTFGAVIHGYCKVGKLNKALEIFRRMGSTSKVPPNTVIYNILIDSLCKEK 583
           M   G  P  + +  +I G  +  +++ A  +  ++      P + V YNILI   C + 
Sbjct: 1   MLRDGCTPDAMVYYKLISGLSQARRMDDAASVLTKLKEAGFCP-DIVCYNILIGGFCNKN 59

Query: 582 KIKDAVALMDDMKVKGVLPNVITYNAMFRGLQEEKWLDKAYKLMDEMNEQACNPDYVTME 403
           ++  A  +++DM+  G+ P+ ITYN +     +   +  A+++M +M +    P  VT  
Sbjct: 60  RLDKAREMLNDMEEAGLEPDTITYNTLISYFGKIGDIKVAHRMMKQMIKDGLQPTVVTYG 119

Query: 402 ILTEWLSAVGETARLKSFVKGYEVAFSNI 316
            L       G         K  + A S +
Sbjct: 120 SLIHAYCLNGNVDEAMKIFKAMDAAASRV 148