BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00028745
         (690 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis ...    98   1e-18
emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera]    97   2e-18
ref|XP_002279526.2| PREDICTED: LOW QUALITY PROTEIN: F-box protei...    94   3e-17
ref|XP_003523538.1| PREDICTED: F-box protein SKIP23-like [Glycin...    92   1e-16
ref|XP_002306011.1| predicted protein [Populus trichocarpa] gi|2...    89   6e-16

>ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis vinifera]
          Length = 389

 Score = 98.2 bits (243), Expect = 1e-18
 Identities = 65/206 (31%), Positives = 106/206 (51%), Gaps = 16/206 (7%)
 Frame = -3

Query: 682 ELIFCRPEIDYEWKRIENGEREMLGYNDVVYCEGKFYAVLFDGSLHVVEGLEGESPVTKL 503
           +L  CR   D  W  +E+ +       DV++  G FYAV   GS+ V + + G SP   +
Sbjct: 188 DLALCRKSDD-SWTFLEDAQSYA---EDVIFHRGLFYAVNKYGSIAVCD-VSGSSPRVSI 242

Query: 502 LISENRMVNYGYDKLYLVESSGDLLRIIR-------IQDDESKTIVK-----IWKLNFEE 359
           +    +   +G D  YLVES  +LL + R       ++ D++  I +     + +L+ + 
Sbjct: 243 IEMPQQ---FGGDLQYLVESGEELLLVTRYLDLTYDVEPDQTSLIYRTTRFQVCRLDLKA 299

Query: 358 CKWVEVKSLDDRAIFVGVSYSYSLSASDFPGCTRNCVYFTEQSLVENRGG----YDICIY 191
            +W  V SL DRA+F+G + S SLS+ DFPGC  NC+Y+T+    +N  G     D+ I+
Sbjct: 300 PRWEVVSSLGDRALFLGENLSLSLSSVDFPGCKGNCIYYTDDYSEDNYDGIGGEQDLGIF 359

Query: 190 NFEDSTMKTIYLDDSTVIQPGPIWYT 113
           N ED +++ +      +  P P+W T
Sbjct: 360 NLEDGSIEPLPCSHFRIRWPPPLWVT 385


>emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera]
          Length = 389

 Score = 97.4 bits (241), Expect = 2e-18
 Identities = 65/206 (31%), Positives = 106/206 (51%), Gaps = 16/206 (7%)
 Frame = -3

Query: 682 ELIFCRPEIDYEWKRIENGEREMLGYNDVVYCEGKFYAVLFDGSLHVVEGLEGESPVTKL 503
           +L  CR   D  W  +E+ +       DV++  G FYAV   GS+ V + + G SP   +
Sbjct: 188 DLALCRKSDD-SWTFLEDAQSYS---EDVIFHRGLFYAVNKYGSIAVCD-VSGSSPRVSI 242

Query: 502 LISENRMVNYGYDKLYLVESSGDLLRIIR-------IQDDESKTIVK-----IWKLNFEE 359
           +    +   +G D  YLVES  +LL + R       ++ D++  I +     + +L+ + 
Sbjct: 243 IEMPQQ---FGGDLQYLVESGEELLLVTRYLDLTYDVEXDQTSLIYRTTRFQVCRLDSKA 299

Query: 358 CKWVEVKSLDDRAIFVGVSYSYSLSASDFPGCTRNCVYFTEQSLVENRGG----YDICIY 191
            +W  V SL DRA+F+G + S SLS+ DFPGC  NC+Y+T+    +N  G     D+ I+
Sbjct: 300 PRWEVVSSLGDRALFLGENLSLSLSSVDFPGCKGNCIYYTDDYSEDNYDGIGGEQDLGIF 359

Query: 190 NFEDSTMKTIYLDDSTVIQPGPIWYT 113
           N ED +++ +      +  P P+W T
Sbjct: 360 NLEDGSIEPLPCSHFRIRWPPPLWVT 385


>ref|XP_002279526.2| PREDICTED: LOW QUALITY PROTEIN: F-box protein SKIP23-like [Vitis
           vinifera]
          Length = 387

 Score = 94.0 bits (232), Expect = 3e-17
 Identities = 68/204 (33%), Positives = 105/204 (51%), Gaps = 20/204 (9%)
 Frame = -3

Query: 655 DYEWKRIENGEREMLGYNDVVYCEGKFYAVLFDGSLHVVEGLEGESPVTKLLISENRMVN 476
           D +W  I++ +     Y+DV++ +GKFYAV   G   VV+  +G SPV  L  S      
Sbjct: 188 DKKWMIIDDMQSP---YDDVIFFDGKFYAVDNTGRTVVVDVADGSSPVVNLAASSV---- 240

Query: 475 YGYDKLYLVESSGDLLRI-----IRIQDDESKTIV-------KIWKLNFEECKWVEVKSL 332
           +G DK  LVES G+LL +     +   DDE    +       K+++L+  E KWVE++SL
Sbjct: 241 FGGDKKVLVESEGELLLVDTYFTMYHDDDEHVRWMIERMIHFKVFRLDQREQKWVEIESL 300

Query: 331 DDRAIFVGVSYSYSLSASDFPGCTRNCVYFTEQSLVENRGGYD------ICIYNFEDSTM 170
            DR +F+G   S+S  ASDF GC  N + FT  S   +    D      I +++ +  ++
Sbjct: 301 GDRLLFLGDDSSFSARASDFYGCKGNSICFTNISFFSDAEEDDASRSGTIGVFDLDSGSI 360

Query: 169 KTI--YLDDSTVIQPGPIWYTSST 104
             +  Y + S  I P P W +S++
Sbjct: 361 GPLSSYANYSKTIWPPPAWVSSTS 384


>ref|XP_003523538.1| PREDICTED: F-box protein SKIP23-like [Glycine max]
          Length = 393

 Score = 92.0 bits (227), Expect = 1e-16
 Identities = 64/210 (30%), Positives = 103/210 (49%), Gaps = 21/210 (10%)
 Frame = -3

Query: 685 DELIFCRPEIDYEWKRIENGEREMLGYNDVVYCEGKFYAVLFDGSLHVVEGLEGESPVTK 506
           + L FCR   D  W  +   E EM  + DVV   G F+AV   G++ V +  EG  P   
Sbjct: 179 NNLAFCRNGYD-SWIFLNGEEEEMNCWEDVVNYNGLFFAVSKGGTIAVCDAGEGCFPPRV 237

Query: 505 LLISENRMVNYGYDKLYLVESSGDLLRIIRIQD--------DESKTIVK-----IWKLNF 365
            +I       +  D  Y V S+GD+L +IR+ D        +ES  + +     ++K+N+
Sbjct: 238 SIIQTTTPFGFAGDIHYAVFSAGDMLLLIRVLDQDFSDHAGEESDLVYRTVGFEVFKMNW 297

Query: 364 EECKWVEVKSLDDRAIFVGVSYSYSLSASDFPGCTRNCVYFTEQSLVENR----GGYDIC 197
               W  V++L +R +FVG + S S  ASDF GC+ +C+YFT+     N     G +D+ 
Sbjct: 298 GLLTWQRVETLGERVLFVGGNSSLSFCASDFVGCSADCIYFTDDYSESNDDDACGKHDLG 357

Query: 196 IYNFEDSTMKTIYLDD----STVIQPGPIW 119
           ++   D +++ +   +    S +  P PIW
Sbjct: 358 VFRLRDKSIEPLPCFNQNSCSRLRWPLPIW 387


>ref|XP_002306011.1| predicted protein [Populus trichocarpa] gi|222848975|gb|EEE86522.1|
           predicted protein [Populus trichocarpa]
          Length = 462

 Score = 89.4 bits (220), Expect = 6e-16
 Identities = 66/235 (28%), Positives = 114/235 (48%), Gaps = 44/235 (18%)
 Frame = -3

Query: 688 NDELIFCR--PEIDYEWKRIENGEREMLGYNDVVYCEGKFYAVLFDGSLHVVEGLEGESP 515
           N  + FC+        W  +E  +   +   D++  E K Y +   GSL V +      P
Sbjct: 226 NSRIAFCQCGDSGAMSWMYLEGMDAPFV---DIMCHENKLYVLANCGSLAVWDLGSDSFP 282

Query: 514 VTKLLISE-------NRMVNYGYD----KLYLVESSGDLLRIIR----IQDDESKTIVK- 383
           V+   I+         + +N   D    +LYLVESSG +L ++R      D+E + + + 
Sbjct: 283 VSTKTITSLFSCASLRQTLNVSSDLYTSRLYLVESSGGVLLVVRRIGEFVDEEGRVLHEG 342

Query: 382 ---------------------IWKLNFEECKWVEVKSLDDRAIFVGVSYSYSLSASDFPG 266
                                +++++F++  WV + SLDD+A+FVG ++S S+   D PG
Sbjct: 343 DLLTDKAAEPLVCAYRTLLFGLFRMDFDKETWVSMTSLDDQAVFVGGNHSASVLTCDLPG 402

Query: 265 CTRNCVYFTE---QSLVEN--RGGYDICIYNFEDSTMKTIYLDDSTVIQPGPIWY 116
           C +N VYFT+   + + E+   GG+D+ ++N +D ++K  Y  D+  IQP P W+
Sbjct: 403 CEKNSVYFTDDYWERMNEDYLYGGHDMGVFNLKDKSVKHFYQLDALKIQPPPCWF 457