BLASTX nr result

ID: Coptis21_contig00028738 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00028738
         (350 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003548315.1| PREDICTED: probable cyclic nucleotide-gated ...   188   5e-46
ref|XP_002452903.1| hypothetical protein SORBIDRAFT_04g034650 [S...   183   1e-44
ref|NP_001048268.1| Os02g0773400 [Oryza sativa Japonica Group] g...   182   2e-44
ref|XP_003634326.1| PREDICTED: probable cyclic nucleotide-gated ...   179   2e-43
ref|XP_002270141.2| PREDICTED: probable cyclic nucleotide-gated ...   179   2e-43

>ref|XP_003548315.1| PREDICTED: probable cyclic nucleotide-gated ion channel 20,
           chloroplastic-like [Glycine max]
          Length = 772

 Score =  188 bits (477), Expect = 5e-46
 Identities = 87/116 (75%), Positives = 106/116 (91%)
 Frame = +1

Query: 1   AYVAPESTVVGAGELVDQPKKIALHYLRGYFFMDVFVALPLPQIMILFVIPRFLGLSAAN 180
           AYV+PESTVVGAG+LVD PKKIAL+YL+GYFF+D+FV LPLPQIMILFV+P++LGLS AN
Sbjct: 268 AYVSPESTVVGAGDLVDHPKKIALNYLKGYFFIDLFVVLPLPQIMILFVLPKYLGLSGAN 327

Query: 181 FAKNLLRVTVLLQYLPRFWRFLPLLAGRSASGFIFETAWANFVINLFIFVLAGHVV 348
           +AKNLLR  +L+QY PR +RFLPLL G+S +GFIFE+AWANF+INL IF+L+GHVV
Sbjct: 328 YAKNLLRAAILVQYFPRLFRFLPLLIGQSPTGFIFESAWANFIINLLIFMLSGHVV 383


>ref|XP_002452903.1| hypothetical protein SORBIDRAFT_04g034650 [Sorghum bicolor]
           gi|241932734|gb|EES05879.1| hypothetical protein
           SORBIDRAFT_04g034650 [Sorghum bicolor]
          Length = 764

 Score =  183 bits (465), Expect = 1e-44
 Identities = 89/116 (76%), Positives = 105/116 (90%)
 Frame = +1

Query: 1   AYVAPESTVVGAGELVDQPKKIALHYLRGYFFMDVFVALPLPQIMILFVIPRFLGLSAAN 180
           AYVAPES VVGAG+LVD+PKK+A+HYL GYFF+D FV LPLPQ+MIL V+P+ +GLSAAN
Sbjct: 245 AYVAPESRVVGAGDLVDEPKKVAIHYLCGYFFLDFFVVLPLPQVMILLVVPK-VGLSAAN 303

Query: 181 FAKNLLRVTVLLQYLPRFWRFLPLLAGRSASGFIFETAWANFVINLFIFVLAGHVV 348
           +AKNLLR TVLLQY+PR  RF+PLL G+SA+GFIFE+AWANFVINL +FVLAGHVV
Sbjct: 304 YAKNLLRATVLLQYVPRIIRFVPLLDGQSANGFIFESAWANFVINLLMFVLAGHVV 359


>ref|NP_001048268.1| Os02g0773400 [Oryza sativa Japonica Group]
           gi|46805376|dbj|BAD16877.1| putative cyclic
           nucleotide-binding transporter 1 [Oryza sativa Japonica
           Group] gi|113537799|dbj|BAF10182.1| Os02g0773400 [Oryza
           sativa Japonica Group]
          Length = 772

 Score =  182 bits (462), Expect = 2e-44
 Identities = 89/119 (74%), Positives = 105/119 (88%), Gaps = 3/119 (2%)
 Frame = +1

Query: 1   AYVAPESTVVGAGELVDQPKKIALHYLRGYFFMDVFVALPLPQIMILFVIPRFLGLSAAN 180
           AYVAPES VVGAG+LVD+PKKIA+ YLRGYF +D FV LPLPQ+MIL VIP+++GLS AN
Sbjct: 244 AYVAPESRVVGAGDLVDEPKKIAVRYLRGYFLLDFFVVLPLPQVMILLVIPKYVGLSTAN 303

Query: 181 FAKNLLRVTVLLQYLPRFWRFLPLLAGR---SASGFIFETAWANFVINLFIFVLAGHVV 348
           +AKNLLR+TVLLQY+PR  RF+PLL G+   SA+GFIFE+AWANFVINL +FVLAGHVV
Sbjct: 304 YAKNLLRITVLLQYVPRIIRFVPLLGGQSDSSANGFIFESAWANFVINLLMFVLAGHVV 362


>ref|XP_003634326.1| PREDICTED: probable cyclic nucleotide-gated ion channel 20,
           chloroplastic-like [Vitis vinifera]
          Length = 783

 Score =  179 bits (455), Expect = 2e-43
 Identities = 85/116 (73%), Positives = 99/116 (85%)
 Frame = +1

Query: 1   AYVAPESTVVGAGELVDQPKKIALHYLRGYFFMDVFVALPLPQIMILFVIPRFLGLSAAN 180
           AYVAPES VVGAG+LVD PKKIA+HYL GYF +D+F+ LPLPQIMIL V+P  LG S AN
Sbjct: 276 AYVAPESRVVGAGDLVDHPKKIAIHYLHGYFLIDLFIVLPLPQIMILLVLPMSLGSSGAN 335

Query: 181 FAKNLLRVTVLLQYLPRFWRFLPLLAGRSASGFIFETAWANFVINLFIFVLAGHVV 348
           +AKNLLR  VL+QY+PR +RFLP LAG+S+SGFIFE+AW NFVINL  FVL+GHVV
Sbjct: 336 YAKNLLRTAVLVQYIPRLYRFLPFLAGQSSSGFIFESAWTNFVINLLTFVLSGHVV 391


>ref|XP_002270141.2| PREDICTED: probable cyclic nucleotide-gated ion channel 20,
           chloroplastic-like [Vitis vinifera]
          Length = 779

 Score =  179 bits (455), Expect = 2e-43
 Identities = 86/116 (74%), Positives = 99/116 (85%)
 Frame = +1

Query: 1   AYVAPESTVVGAGELVDQPKKIALHYLRGYFFMDVFVALPLPQIMILFVIPRFLGLSAAN 180
           AYVAPES VVGAG+LVD PKKIA+HYL GYF +D+F+ LPLPQIMIL V+P  LG S AN
Sbjct: 270 AYVAPESRVVGAGDLVDHPKKIAIHYLCGYFLIDLFIVLPLPQIMILLVLPMSLGTSGAN 329

Query: 181 FAKNLLRVTVLLQYLPRFWRFLPLLAGRSASGFIFETAWANFVINLFIFVLAGHVV 348
           +AKNLLR  VL+QY+PR +RFLP LAG+S SGFIFE+AWANFVINL  FVL+GHVV
Sbjct: 330 YAKNLLRTAVLVQYIPRLYRFLPFLAGQSPSGFIFESAWANFVINLLTFVLSGHVV 385


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