BLASTX nr result

ID: Coptis21_contig00028735 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00028735
         (447 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002323541.1| predicted protein [Populus trichocarpa] gi|2...    90   2e-16
ref|XP_002338928.1| predicted protein [Populus trichocarpa] gi|2...    75   4e-12
dbj|BAC20770.1| hypothetical protein [Oryza sativa Japonica Grou...    59   3e-07
ref|XP_002324388.1| predicted protein [Populus trichocarpa] gi|2...    55   5e-06
ref|XP_003625209.1| hypothetical protein MTR_7g092650 [Medicago ...    55   6e-06

>ref|XP_002323541.1| predicted protein [Populus trichocarpa] gi|222868171|gb|EEF05302.1|
           predicted protein [Populus trichocarpa]
          Length = 426

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 56/145 (38%), Positives = 88/145 (60%), Gaps = 1/145 (0%)
 Frame = +1

Query: 13  LRFVEALSIEKVNLWFLHPFGKGTYYMFGGLAKELPHLQVLTLVIFTTQILPIPANMTEF 192
           L FV+   ++K  +  L  + + T  +   LAK+LP LQ L+L++   ++LP+PA   +F
Sbjct: 242 LTFVDVPHLKKALVRSLFIYRR-TSPICNALAKDLPQLQFLSLIV-KDEVLPLPATSPKF 299

Query: 193 SHLKELELVLILSSDFDLRSVASILNATPCLLKFHLSL-RHGGNRGPRVKRDYSKQLHYQ 369
             LK+L+L++    D DL +V  +LNA+P L    L + R G  R    +R+YS+  H  
Sbjct: 300 ISLKQLDLLIWPFIDSDLLTVIYLLNASPLLEILQLKIGRQGEGRSNGERREYSRHTHSH 359

Query: 370 LKEVEISGFPDRCDALELAIYLLNS 444
           LKEV++ GF D+ +A+ELAIYLL +
Sbjct: 360 LKEVKMEGFRDKWNAMELAIYLLKN 384


>ref|XP_002338928.1| predicted protein [Populus trichocarpa] gi|222873948|gb|EEF11079.1|
           predicted protein [Populus trichocarpa]
          Length = 138

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 41/96 (42%), Positives = 61/96 (63%), Gaps = 1/96 (1%)
 Frame = +1

Query: 160 ILPIPANMTEFSHLKELELVLILSSDFDLRSVASILNATPCLLKFHLSLRHGGN-RGPRV 336
           +LP+PA   +F  LK+L+L++    D DL +V  +LNA+P L    L + H G  R    
Sbjct: 1   VLPLPATSPKFISLKQLDLLIWPFIDSDLLTVIYLLNASPLLEILQLKIGHQGEGRSNGE 60

Query: 337 KRDYSKQLHYQLKEVEISGFPDRCDALELAIYLLNS 444
           +R+YS+  H  LKEV++ GF D+ +A+ELAIYLL +
Sbjct: 61  RREYSRHTHSHLKEVKMEGFRDKWNAMELAIYLLKN 96


>dbj|BAC20770.1| hypothetical protein [Oryza sativa Japonica Group]
           gi|125599211|gb|EAZ38787.1| hypothetical protein
           OsJ_23190 [Oryza sativa Japonica Group]
          Length = 515

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 51/159 (32%), Positives = 76/159 (47%), Gaps = 10/159 (6%)
 Frame = +1

Query: 1   VITNLRFVEALSIEKVNLWFLHPFGKGTYYMFGGLAKELPHLQVLTLVIFTTQILPIPAN 180
           V+TNLR +++L I                Y+F  L   LP L++LTL     + + +P  
Sbjct: 283 VLTNLR-IKSLDISD-----------SLQYIFTELPSTLPRLEMLTLQCRELERITLPDK 330

Query: 181 MTEFSHLKELELVLILSS----DFDLRSVASILNATPCL--LKFHLSLRHGGNRGPRVKR 342
             +F +LK L L L  S     D D+   A IL A P +  L+FH+ +    +   R   
Sbjct: 331 PIKFIYLKHLRLELAFSGPRKWDADILDFACILEAAPLMEKLEFHMWMNCRDHLRYRKAH 390

Query: 343 DYSKQL----HYQLKEVEISGFPDRCDALELAIYLLNSA 447
              + L    HY LKEV I+GF  + D LELA ++L ++
Sbjct: 391 GKLRTLPPCPHYHLKEVNIAGFYGQKDQLELAHHILRNS 429


>ref|XP_002324388.1| predicted protein [Populus trichocarpa] gi|222865822|gb|EEF02953.1|
           predicted protein [Populus trichocarpa]
          Length = 269

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 39/138 (28%), Positives = 70/138 (50%)
 Frame = +1

Query: 34  SIEKVNLWFLHPFGKGTYYMFGGLAKELPHLQVLTLVIFTTQILPIPANMTEFSHLKELE 213
           S+ K+  + +    +  +Y+F  L+K +P ++ LT+    T+        T  +H  +  
Sbjct: 53  SVPKLKRFVIGANERQLHYVFTRLSKHVPRMRSLTV---KTRYATASYMHTRKNHHLQRC 109

Query: 214 LVLILSSDFDLRSVASILNATPCLLKFHLSLRHGGNRGPRVKRDYSKQLHYQLKEVEISG 393
             +  +++FD+  + +IL A P L K +L      + G R K ++S+ +H  LK+VEI G
Sbjct: 110 CEVNSNTEFDILKMIAILRAFPSLQKLYLETCSSEDMG-RGKLEHSEHVHKHLKQVEIGG 168

Query: 394 FPDRCDALELAIYLLNSA 447
           F D  + +  AIYL   A
Sbjct: 169 FYDTSNQIGFAIYLFEHA 186


>ref|XP_003625209.1| hypothetical protein MTR_7g092650 [Medicago truncatula]
           gi|355500224|gb|AES81427.1| hypothetical protein
           MTR_7g092650 [Medicago truncatula]
          Length = 648

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 38/137 (27%), Positives = 68/137 (49%), Gaps = 9/137 (6%)
 Frame = +1

Query: 64  HPFGKGTYYMFGGLAKELPHLQVLTLVIFTTQILPIPANMTEFSHLKELELVL---ILSS 234
           HPFG           + LPH++ L ++I+ +Q+  +   + +F +L++LEL +   +   
Sbjct: 432 HPFGP---------IESLPHIENLAMIIYPSQVEKLKQVLFQFQNLRQLELFVEGGVYDL 482

Query: 235 DFDLRSVASILNATPCLLKFHLSLRHGGNRGPRV------KRDYSKQLHYQLKEVEISGF 396
           D +   +  I+ A+  L K  +++R+   +  R+      KR Y++  H  LK VE  G 
Sbjct: 483 DMNYFWILDIITASQHLQKISITIRNRHLKNSRMVEFKREKRKYAEFSHNDLKYVEFCGC 542

Query: 397 PDRCDALELAIYLLNSA 447
               D +ELA  LL +A
Sbjct: 543 VFSADVIELASQLLRNA 559


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