BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00028731
         (557 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510452.1| pentatricopeptide repeat-containing protein,...   232   3e-59
ref|XP_002280968.2| PREDICTED: pentatricopeptide repeat-containi...   228   4e-58
emb|CBI19765.3| unnamed protein product [Vitis vinifera]              228   4e-58
ref|XP_004152769.1| PREDICTED: pentatricopeptide repeat-containi...   224   9e-57
ref|XP_004170416.1| PREDICTED: LOW QUALITY PROTEIN: agglutinin-l...   221   8e-56

>ref|XP_002510452.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223551153|gb|EEF52639.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 1218

 Score =  232 bits (592), Expect = 3e-59
 Identities = 111/162 (68%), Positives = 126/162 (77%), Gaps = 1/162 (0%)
 Frame = +1

Query: 1    PAPCXXXXXXXXXXXXXXXXVFTGVKQIFLTRTEVICSIQIEYDRNGQSVWSVRHGGSG- 177
            PAPC                VF+G+KQIF+TR E ICSIQIEYDRNGQSVWSVRHGGSG 
Sbjct: 1056 PAPCGPGPWGGDGGRPWDDGVFSGIKQIFVTRAEAICSIQIEYDRNGQSVWSVRHGGSGG 1115

Query: 178  EATTKIKFDYPHEVVTCVCGYYGSISRDDRMKAIKSLTFYTSRGKYGPYGEEIGTFFTST 357
             AT ++K +YPHEV+T + GYYG  SRD+R   +KSLTFYTSRG+YGP+GEEIGTFFTST
Sbjct: 1116 TATNRVKLEYPHEVLTRISGYYGPASRDERPTVVKSLTFYTSRGQYGPFGEEIGTFFTST 1175

Query: 358  TTEGKVLGFHGRSSLYLDAIGVHMQHWLGDGRPSKSILQKIF 483
            TTEGKV+GFHGR   YLDAIGVHMQHWLG+ R S+S L KIF
Sbjct: 1176 TTEGKVVGFHGRCGAYLDAIGVHMQHWLGNNRTSRSSLFKIF 1217



 Score =  133 bits (334), Expect = 2e-29
 Identities = 65/136 (47%), Positives = 97/136 (71%), Gaps = 1/136 (0%)
 Frame = +1

Query: 67   TGVKQIFLTRTEVICSIQIEYDRNGQSVWSVRHGGSGE-ATTKIKFDYPHEVVTCVCGYY 243
            TG++QI+L+R+  I SI+++YDRNGQ+VW  +HGG+G   T KI FDYP+E++T + G Y
Sbjct: 882  TGIRQIYLSRSIGIVSIRVQYDRNGQAVWGSKHGGTGGFKTEKITFDYPYEILTHISGTY 941

Query: 244  GSISRDDRMKAIKSLTFYTSRGKYGPYGEEIGTFFTSTTTEGKVLGFHGRSSLYLDAIGV 423
            G +        IKSLTFYT++GK+GP+G+E G  F++    GK++GFHG+  L+LDAIGV
Sbjct: 942  GPLMFMGP-NIIKSLTFYTNKGKHGPFGDEQGPSFSTKPNGGKIVGFHGKEGLFLDAIGV 1000

Query: 424  HMQHWLGDGRPSKSIL 471
            ++    G  +P++  L
Sbjct: 1001 NLME--GKVKPARHYL 1014



 Score =  117 bits (292), Expect = 2e-24
 Identities = 56/139 (40%), Positives = 95/139 (68%), Gaps = 1/139 (0%)
 Frame = +1

Query: 61   VFTGVKQIFLTRTEVICSIQIEYDRNGQSVWSVRHGGSG-EATTKIKFDYPHEVVTCVCG 237
            V++ V+Q+ +     I SIQIEYD+ G S+WS +HGG+G   T K+K DYP E +  V G
Sbjct: 650  VYSTVRQLVIVHGSGIDSIQIEYDKKGTSIWSEKHGGNGGNRTDKVKLDYPDEYLASVSG 709

Query: 238  YYGSISRDDRMKAIKSLTFYTSRGKYGPYGEEIGTFFTSTTTEGKVLGFHGRSSLYLDAI 417
            +YGS+++   +  ++SLTF +++  YGP+G E GT+F+   T G+++GFHG+   ++DAI
Sbjct: 710  HYGSLNQWGPV-FVRSLTFQSNKRTYGPFGVEQGTYFSFPMTGGRIVGFHGKGGYFVDAI 768

Query: 418  GVHMQHWLGDGRPSKSILQ 474
            G++++  +   + SK+++Q
Sbjct: 769  GIYLKP-VPQQKSSKALVQ 786


>ref|XP_002280968.2| PREDICTED: pentatricopeptide repeat-containing protein At1g19720-like
            [Vitis vinifera]
          Length = 1545

 Score =  228 bits (582), Expect = 4e-58
 Identities = 109/162 (67%), Positives = 124/162 (76%), Gaps = 1/162 (0%)
 Frame = +1

Query: 1    PAPCXXXXXXXXXXXXXXXXVFTGVKQIFLTRTEVICSIQIEYDRNGQSVWSVRHGGS-G 177
            PAPC                VF+G+KQI+LTR E ICSIQIEY RNGQS+WS +HGG  G
Sbjct: 1383 PAPCGPGPWGGDGGRPWDDGVFSGIKQIYLTRAEAICSIQIEYARNGQSIWSTKHGGDYG 1442

Query: 178  EATTKIKFDYPHEVVTCVCGYYGSISRDDRMKAIKSLTFYTSRGKYGPYGEEIGTFFTST 357
              T ++K +YPHEVV+C+CGYYG IS ++   AIKSLTFYTSRGKYGP+GEEIGT+FTST
Sbjct: 1443 TTTHRVKLEYPHEVVSCICGYYGPISINEPWNAIKSLTFYTSRGKYGPFGEEIGTYFTST 1502

Query: 358  TTEGKVLGFHGRSSLYLDAIGVHMQHWLGDGRPSKSILQKIF 483
             TEGKV+GFHGRSSLYLDAIGVHMQHWLGD R  K  L KIF
Sbjct: 1503 RTEGKVVGFHGRSSLYLDAIGVHMQHWLGDQRTLKPNLFKIF 1544



 Score =  126 bits (316), Expect = 3e-27
 Identities = 68/133 (51%), Positives = 91/133 (68%), Gaps = 1/133 (0%)
 Frame = +1

Query: 61   VFTGVKQIFLTRTEVICSIQIEYDRNGQSVWSVRHGGSGE-ATTKIKFDYPHEVVTCVCG 237
            V TGV+QI L+R   I SI++ YD+NGQ+VW  ++GG+G     KI  DYP+EV+T + G
Sbjct: 1199 VSTGVRQINLSRNIGIVSIKVLYDQNGQAVWGSKNGGTGGFRNDKIVIDYPYEVLTHITG 1258

Query: 238  YYGSISRDDRMKAIKSLTFYTSRGKYGPYGEEIGTFFTSTTTEGKVLGFHGRSSLYLDAI 417
            YY   +       IKSLTF+T++ KYGP+GEE GT F+S   EG ++GFHGR+ L++DAI
Sbjct: 1259 YYAP-TMVMGPNIIKSLTFHTTKTKYGPFGEEQGTPFSSNIKEGVIVGFHGRTGLFIDAI 1317

Query: 418  GVHMQHWLGDGRP 456
            GVHM    G  RP
Sbjct: 1318 GVHMIE--GKARP 1328



 Score =  117 bits (293), Expect = 1e-24
 Identities = 58/125 (46%), Positives = 85/125 (68%), Gaps = 1/125 (0%)
 Frame = +1

Query: 61   VFTGVKQIFLTRTEVICSIQIEYDRNGQSVWSVRHGGSGEA-TTKIKFDYPHEVVTCVCG 237
            V++ V+Q+ +     I SI IEYD+NG SVWS +HGGSG   T ++K D P E +T + G
Sbjct: 968  VYSTVRQLVIAHGVGIDSILIEYDKNGSSVWSEKHGGSGGTRTNRVKLDSPDEFLTSIHG 1027

Query: 238  YYGSISRDDRMKAIKSLTFYTSRGKYGPYGEEIGTFFTSTTTEGKVLGFHGRSSLYLDAI 417
            +YGS+     +  ++SLT  +++  YGP+G E G +F+  TT GK++GFHG+S  YLDAI
Sbjct: 1028 HYGSLLERGPV-FVRSLTLESNKRTYGPFGIEQGIYFSLPTTGGKIIGFHGKSGWYLDAI 1086

Query: 418  GVHMQ 432
            GVH++
Sbjct: 1087 GVHLK 1091


>emb|CBI19765.3| unnamed protein product [Vitis vinifera]
          Length = 670

 Score =  228 bits (582), Expect = 4e-58
 Identities = 109/162 (67%), Positives = 124/162 (76%), Gaps = 1/162 (0%)
 Frame = +1

Query: 1   PAPCXXXXXXXXXXXXXXXXVFTGVKQIFLTRTEVICSIQIEYDRNGQSVWSVRHGGS-G 177
           PAPC                VF+G+KQI+LTR E ICSIQIEY RNGQS+WS +HGG  G
Sbjct: 508 PAPCGPGPWGGDGGRPWDDGVFSGIKQIYLTRAEAICSIQIEYARNGQSIWSTKHGGDYG 567

Query: 178 EATTKIKFDYPHEVVTCVCGYYGSISRDDRMKAIKSLTFYTSRGKYGPYGEEIGTFFTST 357
             T ++K +YPHEVV+C+CGYYG IS ++   AIKSLTFYTSRGKYGP+GEEIGT+FTST
Sbjct: 568 TTTHRVKLEYPHEVVSCICGYYGPISINEPWNAIKSLTFYTSRGKYGPFGEEIGTYFTST 627

Query: 358 TTEGKVLGFHGRSSLYLDAIGVHMQHWLGDGRPSKSILQKIF 483
            TEGKV+GFHGRSSLYLDAIGVHMQHWLGD R  K  L KIF
Sbjct: 628 RTEGKVVGFHGRSSLYLDAIGVHMQHWLGDQRTLKPNLFKIF 669



 Score =  126 bits (316), Expect = 3e-27
 Identities = 68/133 (51%), Positives = 91/133 (68%), Gaps = 1/133 (0%)
 Frame = +1

Query: 61  VFTGVKQIFLTRTEVICSIQIEYDRNGQSVWSVRHGGSGE-ATTKIKFDYPHEVVTCVCG 237
           V TGV+QI L+R   I SI++ YD+NGQ+VW  ++GG+G     KI  DYP+EV+T + G
Sbjct: 324 VSTGVRQINLSRNIGIVSIKVLYDQNGQAVWGSKNGGTGGFRNDKIVIDYPYEVLTHITG 383

Query: 238 YYGSISRDDRMKAIKSLTFYTSRGKYGPYGEEIGTFFTSTTTEGKVLGFHGRSSLYLDAI 417
           YY   +       IKSLTF+T++ KYGP+GEE GT F+S   EG ++GFHGR+ L++DAI
Sbjct: 384 YYAP-TMVMGPNIIKSLTFHTTKTKYGPFGEEQGTPFSSNIKEGVIVGFHGRTGLFIDAI 442

Query: 418 GVHMQHWLGDGRP 456
           GVHM    G  RP
Sbjct: 443 GVHMIE--GKARP 453



 Score =  117 bits (293), Expect = 1e-24
 Identities = 58/125 (46%), Positives = 85/125 (68%), Gaps = 1/125 (0%)
 Frame = +1

Query: 61  VFTGVKQIFLTRTEVICSIQIEYDRNGQSVWSVRHGGSGEA-TTKIKFDYPHEVVTCVCG 237
           V++ V+Q+ +     I SI IEYD+NG SVWS +HGGSG   T ++K D P E +T + G
Sbjct: 58  VYSTVRQLVIAHGVGIDSILIEYDKNGSSVWSEKHGGSGGTRTNRVKLDSPDEFLTSIHG 117

Query: 238 YYGSISRDDRMKAIKSLTFYTSRGKYGPYGEEIGTFFTSTTTEGKVLGFHGRSSLYLDAI 417
           +YGS+     +  ++SLT  +++  YGP+G E G +F+  TT GK++GFHG+S  YLDAI
Sbjct: 118 HYGSLLERGPV-FVRSLTLESNKRTYGPFGIEQGIYFSLPTTGGKIIGFHGKSGWYLDAI 176

Query: 418 GVHMQ 432
           GVH++
Sbjct: 177 GVHLK 181


>ref|XP_004152769.1| PREDICTED: pentatricopeptide repeat-containing protein At1g19720-like
            [Cucumis sativus]
          Length = 1463

 Score =  224 bits (570), Expect = 9e-57
 Identities = 106/163 (65%), Positives = 127/163 (77%), Gaps = 2/163 (1%)
 Frame = +1

Query: 1    PAPCXXXXXXXXXXXXXXXXVFTGVKQIFLTRT-EVICSIQIEYDRNGQSVWSVRHGG-S 174
            PAPC                VF+G+KQI+LTR+ E  CSIQIEYDRN QSVWSVRHGG S
Sbjct: 1301 PAPCGPGPWGGDGGKPWDDGVFSGIKQIYLTRSLEAFCSIQIEYDRNKQSVWSVRHGGNS 1360

Query: 175  GEATTKIKFDYPHEVVTCVCGYYGSISRDDRMKAIKSLTFYTSRGKYGPYGEEIGTFFTS 354
            G    ++K DYPHEV+TC+ GYYG I +D+R +A+KSLTF+TSRGK+GP+GEE+G+FFTS
Sbjct: 1361 GTTIHRVKLDYPHEVLTCISGYYGYIGKDERQQAVKSLTFHTSRGKFGPFGEEVGSFFTS 1420

Query: 355  TTTEGKVLGFHGRSSLYLDAIGVHMQHWLGDGRPSKSILQKIF 483
            TTTEGKV+GFHGRSSLYLDAIGVHMQHWLG  R ++S   K+F
Sbjct: 1421 TTTEGKVVGFHGRSSLYLDAIGVHMQHWLGSQRATRSSFFKLF 1463



 Score =  129 bits (325), Expect = 2e-28
 Identities = 65/139 (46%), Positives = 97/139 (69%), Gaps = 1/139 (0%)
 Frame = +1

Query: 61   VFTGVKQIFLTRTEVICSIQIEYDRNGQSVWSVRHGGSGEATTK-IKFDYPHEVVTCVCG 237
            V++ ++Q+ +     I SI+I+YD  G S+WS RHGG+G   T  +K D+P E +T + G
Sbjct: 898  VYSTIRQLIICHGAGIDSIKIQYDVKGSSIWSDRHGGNGGTKTDTVKLDFPDEYLTMIRG 957

Query: 238  YYGSISRDDRMKAIKSLTFYTSRGKYGPYGEEIGTFFTSTTTEGKVLGFHGRSSLYLDAI 417
            +YGS    D++  ++SLTF +++ KYGPYG E GT F+  TTEGK++GFHGRS LYLDAI
Sbjct: 958  HYGSFVSFDKV-FVRSLTFMSNKKKYGPYGVEQGTIFSFPTTEGKIVGFHGRSGLYLDAI 1016

Query: 418  GVHMQHWLGDGRPSKSILQ 474
            GV+++  +    PSK+++Q
Sbjct: 1017 GVYLKP-MAIQSPSKAMIQ 1034



 Score =  113 bits (283), Expect = 2e-23
 Identities = 55/123 (44%), Positives = 84/123 (68%), Gaps = 1/123 (0%)
 Frame = +1

Query: 64   FTGVKQIFLTRTEVICSIQIEYDRNGQSVWSVRHGGSGEAT-TKIKFDYPHEVVTCVCGY 240
            ++G++QI ++R   I  I++ Y  + +S+W  R GG+G     K+ FDYP+E++T V G+
Sbjct: 1127 YSGIRQINVSRNVGIVYIRVLYACDEESIWGARAGGTGGFKYDKVIFDYPYEILTHVTGH 1186

Query: 241  YGSISRDDRMKAIKSLTFYTSRGKYGPYGEEIGTFFTSTTTEGKVLGFHGRSSLYLDAIG 420
            YG +        IKSLTF+T++ KYGP+GE  GT F++   EGK++GFHGR  L+LDA+G
Sbjct: 1187 YGPVMYMGP-NVIKSLTFHTTKAKYGPFGEAQGTPFSTNVKEGKIVGFHGRKGLFLDALG 1245

Query: 421  VHM 429
            VH+
Sbjct: 1246 VHI 1248


>ref|XP_004170416.1| PREDICTED: LOW QUALITY PROTEIN: agglutinin-like, partial [Cucumis
           sativus]
          Length = 348

 Score =  221 bits (562), Expect = 8e-56
 Identities = 104/157 (66%), Positives = 124/157 (78%), Gaps = 2/157 (1%)
 Frame = +1

Query: 1   PAPCXXXXXXXXXXXXXXXXVFTGVKQIFLTRT-EVICSIQIEYDRNGQSVWSVRHGG-S 174
           PAPC                VF+G+KQI+LTR+ E  CSIQIEYDRN QSVWSVRHGG S
Sbjct: 180 PAPCGPGPWGGDGGKPWDDGVFSGIKQIYLTRSLEAFCSIQIEYDRNKQSVWSVRHGGNS 239

Query: 175 GEATTKIKFDYPHEVVTCVCGYYGSISRDDRMKAIKSLTFYTSRGKYGPYGEEIGTFFTS 354
           G    ++K DYPHEV+TC+ GYYG I +D+R +A+KSLTF+TSRGK+GP+GEE+G+FFTS
Sbjct: 240 GTTIHRVKLDYPHEVLTCISGYYGYIGKDERQQAVKSLTFHTSRGKFGPFGEEVGSFFTS 299

Query: 355 TTTEGKVLGFHGRSSLYLDAIGVHMQHWLGDGRPSKS 465
           TTTEGKV+GFHGRSSLYLDAIGVHMQHWLG  R ++S
Sbjct: 300 TTTEGKVVGFHGRSSLYLDAIGVHMQHWLGSQRATRS 336



 Score =  112 bits (280), Expect = 4e-23
 Identities = 54/123 (43%), Positives = 84/123 (68%), Gaps = 1/123 (0%)
 Frame = +1

Query: 64  FTGVKQIFLTRTEVICSIQIEYDRNGQSVWSVRHGGSGEAT-TKIKFDYPHEVVTCVCGY 240
           ++G++QI ++R   I  I++ Y  + +S+W  R GG+G     K+ FDYP+E++T V G+
Sbjct: 6   YSGIRQINVSRNVGIVYIRVLYACDEESIWGARAGGTGGFKYDKVIFDYPYEILTHVTGH 65

Query: 241 YGSISRDDRMKAIKSLTFYTSRGKYGPYGEEIGTFFTSTTTEGKVLGFHGRSSLYLDAIG 420
           YG +        IKSLTF+T++ KYGP+GE  GT F++   +GK++GFHGR  L+LDA+G
Sbjct: 66  YGPVMYMGP-NVIKSLTFHTTKAKYGPFGEAQGTPFSTNVKDGKIVGFHGRKGLFLDALG 124

Query: 421 VHM 429
           VH+
Sbjct: 125 VHI 127