BLASTX nr result

ID: Coptis21_contig00028722 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00028722
         (411 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI35900.3| unnamed protein product [Vitis vinifera]              154   9e-36
ref|XP_002274489.2| PREDICTED: LOW QUALITY PROTEIN: midasin-like...   153   1e-35
ref|XP_002327931.1| predicted protein [Populus trichocarpa] gi|2...   126   2e-27
ref|XP_002521362.1| ATP binding protein, putative [Ricinus commu...   117   1e-24
ref|NP_176883.5| AAA ATPase containing von Willebrand factor typ...   114   8e-24

>emb|CBI35900.3| unnamed protein product [Vitis vinifera]
          Length = 5267

 Score =  154 bits (388), Expect = 9e-36
 Identities = 75/136 (55%), Positives = 100/136 (73%), Gaps = 1/136 (0%)
 Frame = -3

Query: 406  SLQQWNAEDDHNRREEN-TFSPVLESLQELEKEVLDKLVDSPSFDLLFQIYSNVIEHHSL 230
            SLQQWNAE  +N  +E+ ++ PVL SLQ LE EVL+ LV+SPSFDLL Q+ +N++E H L
Sbjct: 2547 SLQQWNAESGYNFTDESRSYIPVLRSLQVLEDEVLNALVESPSFDLLIQLLTNLLEDHIL 2606

Query: 229  LWNGIISSDYECLILSWRSLKKYVMKLQSFFPKAVENLLVQSIGLGNTSAWNLQSVKSML 50
             WN + SS ++ L++SW SL K  MKL+ FFPK+V++LL++   L   S W+L S KS+L
Sbjct: 2607 FWNSVTSSKFDYLLISWHSLMKDAMKLRDFFPKSVKHLLMEVRDLDRVSLWHLHSQKSLL 2666

Query: 49   WVNGGHPLLPSSADTY 2
            WV GGHP +PSSAD Y
Sbjct: 2667 WVYGGHPNMPSSADLY 2682


>ref|XP_002274489.2| PREDICTED: LOW QUALITY PROTEIN: midasin-like [Vitis vinifera]
          Length = 5286

 Score =  153 bits (387), Expect = 1e-35
 Identities = 77/136 (56%), Positives = 101/136 (74%), Gaps = 1/136 (0%)
 Frame = -3

Query: 406  SLQQWNAEDDHNRREEN-TFSPVLESLQELEKEVLDKLVDSPSFDLLFQIYSNVIEHHSL 230
            SLQQWNAE  +N  +E+ ++ PVL SLQ LE EVL+ LV+SPSFDLL Q+ +N++E H L
Sbjct: 2595 SLQQWNAESGYNFTDESRSYIPVLRSLQVLEDEVLNALVESPSFDLLIQLLTNLLEDHIL 2654

Query: 229  LWNGIISSDYECLILSWRSLKKYVMKLQSFFPKAVENLLVQSIGLGNTSAWNLQSVKSML 50
             WN + SS ++ L++SW SL K  MKL+ FFPK+V++LLV+S  L   S W+L S KS+L
Sbjct: 2655 FWNSVTSSKFDYLLISWHSLMKDAMKLRDFFPKSVKHLLVRSY-LDRVSLWHLHSQKSLL 2713

Query: 49   WVNGGHPLLPSSADTY 2
            WV GGHP +PSSAD Y
Sbjct: 2714 WVYGGHPNMPSSADLY 2729


>ref|XP_002327931.1| predicted protein [Populus trichocarpa] gi|222837340|gb|EEE75719.1|
            predicted protein [Populus trichocarpa]
          Length = 5317

 Score =  126 bits (316), Expect = 2e-27
 Identities = 63/136 (46%), Positives = 92/136 (67%), Gaps = 1/136 (0%)
 Frame = -3

Query: 406  SLQQWNAEDDHN-RREENTFSPVLESLQELEKEVLDKLVDSPSFDLLFQIYSNVIEHHSL 230
            S QQWNA+ +H    E   F PVL++LQELEKE+L+ LV+SPS+++L ++YS+++E H  
Sbjct: 2639 SYQQWNAQREHEYTNEAQHFKPVLDALQELEKEILNMLVESPSYNVLIKLYSDILEDHLT 2698

Query: 229  LWNGIISSDYECLILSWRSLKKYVMKLQSFFPKAVENLLVQSIGLGNTSAWNLQSVKSML 50
             W+   SS +E L  SW SL K V+KL+ F P AV+NL +  I        N  S +S+L
Sbjct: 2699 FWDVFTSSRFEKLPFSWHSLMKDVLKLRDFCPGAVDNLFM--IAENIDKKLNQHSQQSLL 2756

Query: 49   WVNGGHPLLPSSADTY 2
            W++GGHP+LP+SA+ +
Sbjct: 2757 WIHGGHPILPASAELF 2772


>ref|XP_002521362.1| ATP binding protein, putative [Ricinus communis]
            gi|223539440|gb|EEF41030.1| ATP binding protein, putative
            [Ricinus communis]
          Length = 5282

 Score =  117 bits (293), Expect = 1e-24
 Identities = 63/139 (45%), Positives = 88/139 (63%), Gaps = 4/139 (2%)
 Frame = -3

Query: 406  SLQQWNAEDDHN-RREENTFSPVLESLQELEKEVLDKLVDSPSFDLLFQIYSNVIEHHSL 230
            S +QWN +  ++   E   F  VLESLQ LE+E+LD LV SPS+D+L ++Y  +++ H +
Sbjct: 2574 SYEQWNIQSGYDYSNEAQCFKLVLESLQGLEREILDMLVTSPSYDVLIKLYIKLLDDHIV 2633

Query: 229  LWNGIISSDYECLILSWRSLKKYVMKLQSFFPKAVENLLVQSIGLGN---TSAWNLQSVK 59
             W   ISS +E L+ SW SL K V +L+ F P AVEN+L+    LGN      +   S +
Sbjct: 2634 FWKAFISSQFEHLLFSWNSLVKDVSRLRDFCPHAVENVLM----LGNKHLDKEFYQGSQQ 2689

Query: 58   SMLWVNGGHPLLPSSADTY 2
            S+LWV+GGHP+LP SA  Y
Sbjct: 2690 SLLWVHGGHPILPPSAKLY 2708


>ref|NP_176883.5| AAA ATPase containing von Willebrand factor type A domain-containing
            protein [Arabidopsis thaliana]
            gi|332196477|gb|AEE34598.1| AAA ATPase containing von
            Willebrand factor type A domain-containing protein
            [Arabidopsis thaliana]
          Length = 5393

 Score =  114 bits (285), Expect = 8e-24
 Identities = 58/135 (42%), Positives = 88/135 (65%)
 Frame = -3

Query: 406  SLQQWNAEDDHNRREENTFSPVLESLQELEKEVLDKLVDSPSFDLLFQIYSNVIEHHSLL 227
            S QQW  E + N  + +TF+  L+SL+ LEK++L ++V +PSF +L Q+Y+ VI++HS  
Sbjct: 2688 SYQQWLVESNDNHTDVSTFTRFLDSLRVLEKKILCEIVGAPSFSVLIQLYTEVIDNHSFF 2747

Query: 226  WNGIISSDYECLILSWRSLKKYVMKLQSFFPKAVENLLVQSIGLGNTSAWNLQSVKSMLW 47
            W+G++SS  E L+ S+ SL K + K+ SFFP  V+ +L +S  + N    +    KSMLW
Sbjct: 2748 WSGLVSSSDEYLLFSFWSLIKSIKKMHSFFPGEVQVVLEESKNINNI-VLHGHPEKSMLW 2806

Query: 46   VNGGHPLLPSSADTY 2
              GGHP LP SA+ +
Sbjct: 2807 AYGGHPSLPVSAELF 2821


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