BLASTX nr result

ID: Coptis21_contig00028710 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00028710
         (674 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI24120.3| unnamed protein product [Vitis vinifera]              169   6e-40
ref|XP_002265884.1| PREDICTED: ABC transporter D family member 2...   169   6e-40
emb|CAN72812.1| hypothetical protein VITISV_004748 [Vitis vinifera]   169   6e-40
ref|XP_002315097.1| peroxisomal membrane ABC transporter family,...   160   3e-37
ref|XP_002514370.1| peroxisomal membrane protein, putative [Rici...   155   9e-36

>emb|CBI24120.3| unnamed protein product [Vitis vinifera]
          Length = 697

 Score =  169 bits (427), Expect = 6e-40
 Identities = 84/125 (67%), Positives = 98/125 (78%)
 Frame = +2

Query: 14  KKPKDEDLIQVLVDVHLGYILSRFNGLDSINEWSSVLSLGEQQRLAFARXXXXXXXXXXX 193
           +KP  +D+I+VL DV LGYILSRFN LDS  EWSSVLSLGEQQRLAFAR           
Sbjct: 565 RKPTTDDIIRVLEDVRLGYILSRFNSLDSTYEWSSVLSLGEQQRLAFARLLLSKPNLVLL 624

Query: 194 DESTSALDEANEAHLYKQIEAAGITYVSVGHRRTIEKYHRKMLHISKMDDDSSQQNWLLK 373
           DESTSALDEANEAHLY+QIEAAGITYVS+GHRRT+  YH + LHIS  D +S+Q+NW ++
Sbjct: 625 DESTSALDEANEAHLYQQIEAAGITYVSIGHRRTLYGYHNRRLHISAADPNSTQRNWYIE 684

Query: 374 DINQN 388
            INQ+
Sbjct: 685 PINQD 689


>ref|XP_002265884.1| PREDICTED: ABC transporter D family member 2, chloroplastic-like
           [Vitis vinifera]
          Length = 722

 Score =  169 bits (427), Expect = 6e-40
 Identities = 84/125 (67%), Positives = 98/125 (78%)
 Frame = +2

Query: 14  KKPKDEDLIQVLVDVHLGYILSRFNGLDSINEWSSVLSLGEQQRLAFARXXXXXXXXXXX 193
           +KP  +D+I+VL DV LGYILSRFN LDS  EWSSVLSLGEQQRLAFAR           
Sbjct: 590 RKPTTDDIIRVLEDVRLGYILSRFNSLDSTYEWSSVLSLGEQQRLAFARLLLSKPNLVLL 649

Query: 194 DESTSALDEANEAHLYKQIEAAGITYVSVGHRRTIEKYHRKMLHISKMDDDSSQQNWLLK 373
           DESTSALDEANEAHLY+QIEAAGITYVS+GHRRT+  YH + LHIS  D +S+Q+NW ++
Sbjct: 650 DESTSALDEANEAHLYQQIEAAGITYVSIGHRRTLYGYHNRRLHISAADPNSTQRNWYIE 709

Query: 374 DINQN 388
            INQ+
Sbjct: 710 PINQD 714


>emb|CAN72812.1| hypothetical protein VITISV_004748 [Vitis vinifera]
          Length = 1504

 Score =  169 bits (427), Expect = 6e-40
 Identities = 84/125 (67%), Positives = 98/125 (78%)
 Frame = +2

Query: 14   KKPKDEDLIQVLVDVHLGYILSRFNGLDSINEWSSVLSLGEQQRLAFARXXXXXXXXXXX 193
            +KP  +D+I+VL DV LGYILSRFN LDS  EWSSVLSLGEQQRLAFAR           
Sbjct: 1372 RKPTTDDIIRVLEDVRLGYILSRFNSLDSTYEWSSVLSLGEQQRLAFARLLLSKPNLVLL 1431

Query: 194  DESTSALDEANEAHLYKQIEAAGITYVSVGHRRTIEKYHRKMLHISKMDDDSSQQNWLLK 373
            DESTSALDEANEAHLY+QIEAAGITYVS+GHRRT+  YH + LHIS  D +S+Q+NW ++
Sbjct: 1432 DESTSALDEANEAHLYQQIEAAGITYVSIGHRRTLYGYHNRRLHISAADPNSTQRNWYIE 1491

Query: 374  DINQN 388
             INQ+
Sbjct: 1492 PINQD 1496


>ref|XP_002315097.1| peroxisomal membrane ABC transporter family, PMP family [Populus
           trichocarpa] gi|222864137|gb|EEF01268.1| peroxisomal
           membrane ABC transporter family, PMP family [Populus
           trichocarpa]
          Length = 651

 Score =  160 bits (404), Expect = 3e-37
 Identities = 79/124 (63%), Positives = 96/124 (77%)
 Frame = +2

Query: 17  KPKDEDLIQVLVDVHLGYILSRFNGLDSINEWSSVLSLGEQQRLAFARXXXXXXXXXXXD 196
           KP  +DLIQVL DV LGYILSRF  LDS +EWSSVLSLGEQQRLAFAR           D
Sbjct: 520 KPTTDDLIQVLEDVRLGYILSRFGSLDSTHEWSSVLSLGEQQRLAFARLLLSKPKVVLLD 579

Query: 197 ESTSALDEANEAHLYKQIEAAGITYVSVGHRRTIEKYHRKMLHISKMDDDSSQQNWLLKD 376
           ESTSALDEANE HLY+QIEAAG+TY+SVGHRRT+  +H + LHI+ +D  S+++NW ++ 
Sbjct: 580 ESTSALDEANEEHLYRQIEAAGMTYISVGHRRTLYDHHNRNLHITTVDPSSNERNWHVEP 639

Query: 377 INQN 388
           IN++
Sbjct: 640 INRD 643


>ref|XP_002514370.1| peroxisomal membrane protein, putative [Ricinus communis]
           gi|223546467|gb|EEF47966.1| peroxisomal membrane
           protein, putative [Ricinus communis]
          Length = 742

 Score =  155 bits (391), Expect = 9e-36
 Identities = 78/122 (63%), Positives = 93/122 (76%)
 Frame = +2

Query: 17  KPKDEDLIQVLVDVHLGYILSRFNGLDSINEWSSVLSLGEQQRLAFARXXXXXXXXXXXD 196
           KP  +DL+QVL  V L YILSRF  LDS NEWSSVLSLGEQQRLAFAR           D
Sbjct: 612 KPTTDDLVQVLEKVRLCYILSRFGSLDSTNEWSSVLSLGEQQRLAFARLLLSKPKLVLLD 671

Query: 197 ESTSALDEANEAHLYKQIEAAGITYVSVGHRRTIEKYHRKMLHISKMDDDSSQQNWLLKD 376
           E+TSALDEANEAHLY+QIEAAGITY+S+GHRRT+ +YH  +LHI+  D  +S++NW ++ 
Sbjct: 672 EATSALDEANEAHLYQQIEAAGITYISIGHRRTLCEYHNTVLHIATGDPLNSKRNWHIES 731

Query: 377 IN 382
           IN
Sbjct: 732 IN 733


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