BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00028701
         (383 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002329612.1| predicted protein [Populus trichocarpa] gi|2...    71   1e-10
ref|XP_002313562.1| predicted protein [Populus trichocarpa] gi|2...    71   1e-10
ref|XP_002332211.1| predicted protein [Populus trichocarpa] gi|2...    70   1e-10
gb|AAD21699.1| Contains reverse transcriptase domain (rvt) PF|00...    70   2e-10
ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|2...    68   7e-10

>ref|XP_002329612.1| predicted protein [Populus trichocarpa] gi|222870351|gb|EEF07482.1|
            predicted protein [Populus trichocarpa]
          Length = 1046

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 40/121 (33%), Positives = 58/121 (47%), Gaps = 1/121 (0%)
 Frame = +2

Query: 8    LVWGKLLVPKHSFTMWQLFAGALPTQNRLMVRKVLTQSRCCLCDPAEESSTHLFFDCLYS 187
            +VW K  VP+HSF +W +    L TQ++L    +   +RC LC    E   HLFF+C Y+
Sbjct: 878  IVWFKNAVPRHSFLLWMVVQQKLTTQDKLHRFGIHGPNRCSLCLRNNEDHNHLFFECSYT 937

Query: 188  KMVWQAVKKAMGLSDLVRQSHDEWYHLMRLCIPNTTVSEVMRDM-IGATVQAIWNERNWR 364
            K +W  V     +  + +   DEW     +     +     R +   ATV  +W ERN R
Sbjct: 938  KAIWWDVCDRCDIPRMTK-GWDEWIRWATVSWHGKSFINFSRKLSFAATVYHVWQERNAR 996

Query: 365  I 367
            I
Sbjct: 997  I 997


>ref|XP_002313562.1| predicted protein [Populus trichocarpa] gi|222849970|gb|EEE87517.1|
           predicted protein [Populus trichocarpa]
          Length = 331

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 40/121 (33%), Positives = 58/121 (47%), Gaps = 1/121 (0%)
 Frame = +2

Query: 8   LVWGKLLVPKHSFTMWQLFAGALPTQNRLMVRKVLTQSRCCLCDPAEESSTHLFFDCLYS 187
           +VW K  VP+HSF +W +    L TQ++L    +   +RC LC    E   HLFF+C Y+
Sbjct: 163 IVWFKNAVPRHSFLLWMVVQQKLTTQDKLHRFGIHGPNRCSLCLRNNEDHNHLFFECSYT 222

Query: 188 KMVWQAVKKAMGLSDLVRQSHDEWYHLMRLCIPNTTVSEVMRDM-IGATVQAIWNERNWR 364
           K +W  V     +  + +   DEW     +     +     R +   ATV  +W ERN R
Sbjct: 223 KAIWWDVCDRCDIPRMTK-GWDEWIRWATVSWHGKSFVNFSRKLSFAATVYHVWQERNAR 281

Query: 365 I 367
           I
Sbjct: 282 I 282


>ref|XP_002332211.1| predicted protein [Populus trichocarpa] gi|222874875|gb|EEF12006.1|
            predicted protein [Populus trichocarpa]
          Length = 1386

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 40/121 (33%), Positives = 57/121 (47%), Gaps = 1/121 (0%)
 Frame = +2

Query: 8    LVWGKLLVPKHSFTMWQLFAGALPTQNRLMVRKVLTQSRCCLCDPAEESSTHLFFDCLYS 187
            +VW K  VP+HSF +W      L TQ++L    +   +RC LC    E   HLFF+C Y+
Sbjct: 1218 IVWFKNAVPRHSFLLWMAVQQKLTTQDKLYRFGIHGPNRCSLCLRNNEDHNHLFFECSYT 1277

Query: 188  KMVWQAVKKAMGLSDLVRQSHDEWYHLMRLCIPNTTVSEVMRDM-IGATVQAIWNERNWR 364
            K +W  V     +  + +   DEW     +     +     R +   ATV  +W ERN R
Sbjct: 1278 KAIWWDVCDRCDIPRMTK-GWDEWIRWATVSWHGKSFVNFSRKLSFAATVYHVWQERNAR 1336

Query: 365  I 367
            I
Sbjct: 1337 I 1337


>gb|AAD21699.1| Contains reverse transcriptase domain (rvt) PF|00078 [Arabidopsis
            thaliana]
          Length = 1253

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 41/120 (34%), Positives = 59/120 (49%), Gaps = 2/120 (1%)
 Frame = +2

Query: 5    KLVWGKLLVPKHSFTMWQLFAGALPTQNRLMVRKVLTQSRCCLCDPAEESSTHLFFDCLY 184
            K VW K  VPKH+F MW      LPT+ RL    V T + CCLC    ES  HL   C++
Sbjct: 924  KSVWFKGSVPKHAFNMWVSHLNRLPTRQRLAAWGVTTTTDCCLCSSRPESRDHLLLYCVF 983

Query: 185  SKMVWQAVKKAMGLSDLVRQSHDEWYHLMRLCIPNTTVSEVMRDMIG--ATVQAIWNERN 358
            S ++W+ V   +  S  +  S   W  L+     N++ +  +   I   A+V  +W +RN
Sbjct: 984  SAVIWKLVFFRLTPSQAIFNS---WAELLSWTRINSSKAPSLLRKIAAQASVFHLWKQRN 1040


>ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|222873039|gb|EEF10170.1|
           predicted protein [Populus trichocarpa]
          Length = 517

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 40/121 (33%), Positives = 58/121 (47%), Gaps = 1/121 (0%)
 Frame = +2

Query: 8   LVWGKLLVPKHSFTMWQLFAGALPTQNRLMVRKVLTQSRCCLCDPAEESSTHLFFDCLYS 187
           +VW K  VP+HSF +W      L TQ++L    +   +RC LC    E   HLFF+C Y+
Sbjct: 345 IVWFKNAVPRHSFLLWMAVQQKLTTQDKLHRFGIHGPNRCSLCLRNNEDHNHLFFECSYT 404

Query: 188 KMVWQAVKKAMGLSDLVRQSHDEWYHLMRLCIPNTT-VSEVMRDMIGATVQAIWNERNWR 364
           K +W  V     +  + +   DEW     +     + V+   +    ATV  +W ERN R
Sbjct: 405 KAIWWDVCDRCDIPRMTK-GWDEWIRWATVSWHGKSFVNFSCKLSFAATVYHVWQERNAR 463

Query: 365 I 367
           I
Sbjct: 464 I 464