BLASTX nr result

ID: Coptis21_contig00028693 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00028693
         (454 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263494.1| PREDICTED: uncharacterized protein LOC100256...   146   1e-33
emb|CAN72960.1| hypothetical protein VITISV_008500 [Vitis vinifera]   144   7e-33
ref|XP_002313901.1| predicted protein [Populus trichocarpa] gi|2...   130   1e-28
emb|CAN71564.1| hypothetical protein VITISV_007567 [Vitis vinifera]   130   1e-28
ref|XP_002300258.1| predicted protein [Populus trichocarpa] gi|2...   125   3e-27

>ref|XP_002263494.1| PREDICTED: uncharacterized protein LOC100256708 [Vitis vinifera]
          Length = 354

 Score =  146 bits (369), Expect = 1e-33
 Identities = 74/143 (51%), Positives = 101/143 (70%)
 Frame = -2

Query: 453 KTLRRSFLSALHPESMCNFYELPDTLSLKKQLERKLESEGLGISVDCANILNNALDTFVK 274
           K+L    +   HPE+  N  ELPDT SL+  LERKLE EG G+S+DC N+LNN+LD F+K
Sbjct: 213 KSLCNGSICNYHPETCHNSGELPDTGSLRSHLERKLEMEGFGVSMDCVNLLNNSLDVFLK 272

Query: 273 RMIKPCLELARSRNVGECLKQVSGHNIPDDLHILSTNKSMQRSKQCISASLLDFRVAMEL 94
           R+I+PCL+L  SR   E L+Q++   +P    IL   + +Q+S++   AS+LDFRVAMEL
Sbjct: 273 RLIEPCLQLVGSRCGNEHLRQLNAQTLPGMNRIL-PGRYIQKSRKPKYASVLDFRVAMEL 331

Query: 93  QPSLLGENWPVHLERVCLRASEE 25
            P +LGE+WP+ LE++CL ASEE
Sbjct: 332 NPQILGEDWPIQLEKICLHASEE 354


>emb|CAN72960.1| hypothetical protein VITISV_008500 [Vitis vinifera]
          Length = 354

 Score =  144 bits (363), Expect = 7e-33
 Identities = 74/143 (51%), Positives = 100/143 (69%)
 Frame = -2

Query: 453 KTLRRSFLSALHPESMCNFYELPDTLSLKKQLERKLESEGLGISVDCANILNNALDTFVK 274
           K+L    +   HPE+  N  ELPDT SL+  LERKLE EG  +S+DC N+LNN+LD F+K
Sbjct: 213 KSLCNGSVCNYHPETCHNSGELPDTGSLRSHLERKLEMEGFSVSMDCVNLLNNSLDVFLK 272

Query: 273 RMIKPCLELARSRNVGECLKQVSGHNIPDDLHILSTNKSMQRSKQCISASLLDFRVAMEL 94
           R+I+PCL+L  SR   E L+Q++   +P    IL   + +Q+S++   AS+LDFRVAMEL
Sbjct: 273 RLIEPCLQLVGSRCGNEHLRQLNAQTLPGMNRIL-PGRYIQKSRKPKYASVLDFRVAMEL 331

Query: 93  QPSLLGENWPVHLERVCLRASEE 25
            P +LGE+WPV LE++CL ASEE
Sbjct: 332 NPQILGEDWPVQLEKICLHASEE 354


>ref|XP_002313901.1| predicted protein [Populus trichocarpa] gi|222850309|gb|EEE87856.1|
           predicted protein [Populus trichocarpa]
          Length = 355

 Score =  130 bits (327), Expect = 1e-28
 Identities = 70/143 (48%), Positives = 95/143 (66%), Gaps = 1/143 (0%)
 Frame = -2

Query: 453 KTLRRSFLSALHPESMC-NFYELPDTLSLKKQLERKLESEGLGISVDCANILNNALDTFV 277
           K L  + L   H +  C N  ELPDT SL+ +LE+KLE EG+  S+DC N+LNN LD ++
Sbjct: 213 KALSNASLCNNHLKRTCLNSGELPDTRSLRSRLEQKLEMEGISASLDCVNLLNNGLDAYL 272

Query: 276 KRMIKPCLELARSRNVGECLKQVSGHNIPDDLHILSTNKSMQRSKQCISASLLDFRVAME 97
           KR+I+PC+ LA SR+  E LK+ SG  IP  L+ +   K MQR  + I AS+LDFRV+ME
Sbjct: 273 KRLIEPCMALAGSRHGKEYLKKASGQFIP-GLNEMLPGKYMQRETKSIYASMLDFRVSME 331

Query: 96  LQPSLLGENWPVHLERVCLRASE 28
             P +LGE+WP  LE++ L+  E
Sbjct: 332 SNPQILGEDWPTQLEKISLQGFE 354


>emb|CAN71564.1| hypothetical protein VITISV_007567 [Vitis vinifera]
          Length = 355

 Score =  130 bits (326), Expect = 1e-28
 Identities = 74/143 (51%), Positives = 93/143 (65%)
 Frame = -2

Query: 453 KTLRRSFLSALHPESMCNFYELPDTLSLKKQLERKLESEGLGISVDCANILNNALDTFVK 274
           K L     SA   ES     ELPDT SL+ +LE+KLE EG  IS DC ++LNN LD F+K
Sbjct: 214 KVLCNEAPSAFQIESCQIMGELPDTHSLRNRLEQKLEMEGFKISGDCISLLNNGLDVFLK 273

Query: 273 RMIKPCLELARSRNVGECLKQVSGHNIPDDLHILSTNKSMQRSKQCISASLLDFRVAMEL 94
           R+IKPCLELA SR+  + L Q  GH +     +    + +Q+    I AS+LDFRVAM+L
Sbjct: 274 RLIKPCLELASSRSGQKHLSQKHGHVVSGPKGMWPV-RYVQKPAGSIPASILDFRVAMDL 332

Query: 93  QPSLLGENWPVHLERVCLRASEE 25
            P +LGE+WPV LE+VCLRAS E
Sbjct: 333 NPYILGEDWPVKLEKVCLRASGE 355


>ref|XP_002300258.1| predicted protein [Populus trichocarpa] gi|222847516|gb|EEE85063.1|
           predicted protein [Populus trichocarpa]
          Length = 341

 Score =  125 bits (315), Expect = 3e-27
 Identities = 63/127 (49%), Positives = 85/127 (66%)
 Frame = -2

Query: 417 PESMCNFYELPDTLSLKKQLERKLESEGLGISVDCANILNNALDTFVKRMIKPCLELARS 238
           PE+  N  ELPDT SL+  LE+KLE EG+G+S+DC N+LNN LD ++KR+I+PC+ LA S
Sbjct: 228 PETCLNSGELPDTRSLRSHLEQKLEMEGIGVSLDCVNLLNNGLDVYLKRLIEPCMALAGS 287

Query: 237 RNVGECLKQVSGHNIPDDLHILSTNKSMQRSKQCISASLLDFRVAMELQPSLLGENWPVH 58
           R   E LK  SG             +  QR ++ ++AS+LDFR AME  P +LGE+WPV 
Sbjct: 288 RCDNEQLKSASG-------------EYAQRQRKSVNASMLDFRFAMESNPQILGEDWPVQ 334

Query: 57  LERVCLR 37
           LE++ LR
Sbjct: 335 LEKISLR 341


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