BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00028689
         (633 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003634994.1| PREDICTED: pentatricopeptide repeat-containi...    83   5e-14
emb|CBI26320.3| unnamed protein product [Vitis vinifera]               82   6e-14
ref|XP_002283562.1| PREDICTED: pentatricopeptide repeat-containi...    82   6e-14
emb|CAN62238.1| hypothetical protein VITISV_014689 [Vitis vinifera]    82   8e-14
ref|XP_003553630.1| PREDICTED: pentatricopeptide repeat-containi...    82   1e-13

>ref|XP_003634994.1| PREDICTED: pentatricopeptide repeat-containing protein At3g63370-like
            [Vitis vinifera]
          Length = 993

 Score = 82.8 bits (203), Expect = 5e-14
 Identities = 41/84 (48%), Positives = 56/84 (66%)
 Frame = -2

Query: 632  EIGEIVAKPLLEIEPENAGNYVLLASIYAKARKWKQVEYVRGLMKSRGATKSPGLSRIEI 453
            E+GEI A+ LLE++PEN GNYVL++++YA  R+WK VE VR  MK+ G  K+PG S IE+
Sbjct: 806  ELGEIAAQKLLEMDPENPGNYVLVSNVYAAERRWKDVEEVRMRMKASGLKKNPGCSWIEV 865

Query: 452  GGRSHKFRMDDIPDHLSGEDLVSK 381
            G + H F   D   H    ++ SK
Sbjct: 866  GNKVHTFMARD-KSHPQSYEIYSK 888


>emb|CBI26320.3| unnamed protein product [Vitis vinifera]
          Length = 522

 Score = 82.4 bits (202), Expect = 6e-14
 Identities = 37/71 (52%), Positives = 50/71 (70%)
 Frame = -2

Query: 632 EIGEIVAKPLLEIEPENAGNYVLLASIYAKARKWKQVEYVRGLMKSRGATKSPGLSRIEI 453
           EIGE+V K L+++EPE +GNYVLL+++YA   +W  V+ VR LMK  G  K PG S +E+
Sbjct: 336 EIGEVVLKHLIQLEPETSGNYVLLSNMYASINRWDDVKRVRKLMKDHGINKVPGSSLVEV 395

Query: 452 GGRSHKFRMDD 420
           GG  H+F M D
Sbjct: 396 GGAMHEFLMGD 406


>ref|XP_002283562.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g43790-like [Vitis vinifera]
          Length = 590

 Score = 82.4 bits (202), Expect = 6e-14
 Identities = 37/71 (52%), Positives = 50/71 (70%)
 Frame = -2

Query: 632 EIGEIVAKPLLEIEPENAGNYVLLASIYAKARKWKQVEYVRGLMKSRGATKSPGLSRIEI 453
           EIGE+V K L+++EPE +GNYVLL+++YA   +W  V+ VR LMK  G  K PG S +E+
Sbjct: 404 EIGEVVLKHLIQLEPETSGNYVLLSNMYASINRWDDVKRVRKLMKDHGINKVPGSSLVEV 463

Query: 452 GGRSHKFRMDD 420
           GG  H+F M D
Sbjct: 464 GGAMHEFLMGD 474


>emb|CAN62238.1| hypothetical protein VITISV_014689 [Vitis vinifera]
          Length = 957

 Score = 82.0 bits (201), Expect = 8e-14
 Identities = 40/84 (47%), Positives = 56/84 (66%)
 Frame = -2

Query: 632  EIGEIVAKPLLEIEPENAGNYVLLASIYAKARKWKQVEYVRGLMKSRGATKSPGLSRIEI 453
            E+GEI A+ LLE++PEN GNYVL++++Y+  R+WK VE VR  MK+ G  K+PG S IE+
Sbjct: 770  ELGEIAAQKLLEMDPENPGNYVLVSNVYSAERRWKDVEXVRMRMKASGLKKNPGCSWIEV 829

Query: 452  GGRSHKFRMDDIPDHLSGEDLVSK 381
            G + H F   D   H    ++ SK
Sbjct: 830  GNKVHTFMARD-KSHPQSYEIYSK 852


>ref|XP_003553630.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g06540-like [Glycine max]
          Length = 622

 Score = 81.6 bits (200), Expect = 1e-13
 Identities = 38/71 (53%), Positives = 52/71 (73%)
 Frame = -2

Query: 632 EIGEIVAKPLLEIEPENAGNYVLLASIYAKARKWKQVEYVRGLMKSRGATKSPGLSRIEI 453
           E+GE V K LLE++PE +G+YVLL++IYA+A KWK V  +R +MK +G  K PG S IEI
Sbjct: 435 EVGERVGKILLEMQPEYSGHYVLLSNIYARANKWKDVTVMRQMMKDKGVRKPPGYSLIEI 494

Query: 452 GGRSHKFRMDD 420
            G+ H+F + D
Sbjct: 495 DGKVHEFTIGD 505