BLASTX nr result

ID: Coptis21_contig00028682 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00028682
         (525 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002305221.1| predicted protein [Populus trichocarpa] gi|2...    94   1e-17
emb|CAN75247.1| hypothetical protein VITISV_027237 [Vitis vinifera]    92   4e-17
ref|XP_002302939.1| predicted protein [Populus trichocarpa] gi|2...    90   2e-16
ref|XP_002870539.1| hypothetical protein ARALYDRAFT_493733 [Arab...    75   6e-12
ref|XP_003600698.1| hypothetical protein MTR_3g065210 [Medicago ...    71   1e-10

>ref|XP_002305221.1| predicted protein [Populus trichocarpa] gi|222848185|gb|EEE85732.1|
           predicted protein [Populus trichocarpa]
          Length = 192

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 57/143 (39%), Positives = 83/143 (58%), Gaps = 4/143 (2%)
 Frame = +1

Query: 91  MERRKSRAG--TDELA-TKAAAWAWYQRGLVSEGKLMQEFGIRRIHRVPRPSRFKLEYMK 261
           ME++K + G  TD+LA  KAAAWAWY  G  SEG+ + EF + R  + PRPSR+KLE   
Sbjct: 11  MEKKKPKGGGSTDDLALVKAAAWAWYHHGSGSEGRPICEFDVTRTRQAPRPSRYKLE--- 67

Query: 262 RTDETMENXXXXXXXXXXPTHSENSLLDQYEIEMISKHLDRLLEADRGIIHGACTNDQDH 441
            T    E+          P  ++NSLLD+YE+E ISK LD L+E+     +G   +  DH
Sbjct: 68  ATRTMKEDTMGSGSETPSPIRTDNSLLDKYEVESISKQLDYLIESSSNRFYGFKIDHLDH 127

Query: 442 RKKQ-SLLENDKHRKIIRKMSNK 507
            ++  S L++D+   + +K  +K
Sbjct: 128 DQRSISSLDSDQTGGMKQKKKDK 150


>emb|CAN75247.1| hypothetical protein VITISV_027237 [Vitis vinifera]
          Length = 247

 Score = 92.4 bits (228), Expect = 4e-17
 Identities = 59/129 (45%), Positives = 70/129 (54%), Gaps = 9/129 (6%)
 Frame = +1

Query: 91  MERRKSRAGTDELAT-KAAAWAWYQRGLVSEGKLMQEFGIRRIHRVPRPSRFKLEYMKRT 267
           MERRKSR   D LAT KAAAWAWYQRG  SEGK + EF + R      PSR+KLE M+  
Sbjct: 1   MERRKSRVSLDPLATVKAAAWAWYQRGSGSEGKPISEFQVTRARPALIPSRYKLEAMRMA 60

Query: 268 DETME-NXXXXXXXXXXPTHSENSLLDQYEIEMISKHLDRLLEAD-------RGIIHGAC 423
           +E  E            P  S  SLLD YEIE IS+ LD L+E           +  G+ 
Sbjct: 61  EEGPEKEGSSASSATSTPNLSHTSLLDTYEIERISQQLDILIETSGKGIRTGTNLYKGSG 120

Query: 424 TNDQDHRKK 450
           TN +  +KK
Sbjct: 121 TNSRKEKKK 129


>ref|XP_002302939.1| predicted protein [Populus trichocarpa] gi|222844665|gb|EEE82212.1|
           predicted protein [Populus trichocarpa]
          Length = 170

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 59/137 (43%), Positives = 77/137 (56%), Gaps = 9/137 (6%)
 Frame = +1

Query: 91  MERRKSRAGT---DELATKAAAWAWYQRGLVSEGKLMQEFGIRRIHRVPRPSRFKLEYMK 261
           ME++K + G    D    KAAAWAWYQ G  SEGK M E  +    + PRPSR+KLE M+
Sbjct: 1   MEKKKPKGGDSTGDLTLVKAAAWAWYQHGSGSEGKPMCESYVTSTRQAPRPSRYKLEDMR 60

Query: 262 R--TDETMENXXXXXXXXXXPTHSENSLLDQYEIEMISKHLDRLLEADRGIIHGACTNDQ 435
               ++TM+           P  ++NSLLD YE+E ISKHLD L+E+     +G    D+
Sbjct: 61  LRVKEDTMDG-----SGAPSPIGADNSLLDNYEVESISKHLDYLMESSSKRSYGVEIFDR 115

Query: 436 D---HRKKQ-SLLENDK 474
           D   HR K  SLL  D+
Sbjct: 116 DDHLHRGKSISLLHGDQ 132


>ref|XP_002870539.1| hypothetical protein ARALYDRAFT_493733 [Arabidopsis lyrata subsp.
           lyrata] gi|297316375|gb|EFH46798.1| hypothetical protein
           ARALYDRAFT_493733 [Arabidopsis lyrata subsp. lyrata]
          Length = 225

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 58/139 (41%), Positives = 72/139 (51%), Gaps = 8/139 (5%)
 Frame = +1

Query: 109 RAGTDELAT-KAAAWAWYQRGLVSEGK-LMQEFGI-RRIHRVPRPSRFKLEYMKRTDETM 279
           RAG DELAT KAAAWAWYQR    EGK +M+EF    R  R+PRPSR+KLE  K    + 
Sbjct: 45  RAGDDELATVKAAAWAWYQR---HEGKPMMREFDFTTRATRIPRPSRYKLEASKNMTLSE 101

Query: 280 ENXXXXXXXXXXPTHSE---NSLLDQYEIEMISKHLDRLLEADRGIIHGACTNDQDHRKK 450
           +N              E   +SLLD YEI+ ISK +D        +      +  DH   
Sbjct: 102 KNVSKPHSNHLMRGDQETKFSSLLDPYEIKSISKRIDE-GSLPTSVFRNGHGHHYDHDML 160

Query: 451 QSLLEND--KHRKIIRKMS 501
           Q  LE D  K   +++KMS
Sbjct: 161 QKKLEYDSKKENGLVKKMS 179


>ref|XP_003600698.1| hypothetical protein MTR_3g065210 [Medicago truncatula]
           gi|355489746|gb|AES70949.1| hypothetical protein
           MTR_3g065210 [Medicago truncatula]
          Length = 181

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 46/126 (36%), Positives = 67/126 (53%), Gaps = 6/126 (4%)
 Frame = +1

Query: 91  MERRKS---RAGTDELA-TKAAAWAWYQRGLVSEGKLMQ-EFGIRRIHRVPRPSRFKLEY 255
           ME+++    +   DELA  KAAAWAWYQ G  SE K    EF + R  R PRPSR+KLE 
Sbjct: 12  MEKKRKPQPQESRDELALVKAAAWAWYQHGSRSERKKSSNEFDVTRTQRSPRPSRYKLEA 71

Query: 256 MKRTDETMENXXXXXXXXXXPTHSENSLLDQYEIEMISKHLDRLLE-ADRGIIHGACTND 432
           M+  + T                +  SLLD YE++ IS+  D L++ +++  + G C  +
Sbjct: 72  MRMAEVT---DLTCNGLEVGTIANNKSLLDTYEVQSISRQFDSLIDSSNKQHMDGNCAKN 128

Query: 433 QDHRKK 450
            D  ++
Sbjct: 129 DDGNRR 134


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