BLASTX nr result

ID: Coptis21_contig00028680 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00028680
         (375 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003551345.1| PREDICTED: ABC transporter C family member 3...   149   2e-34
ref|XP_003634755.1| PREDICTED: ABC transporter C family member 3...   149   2e-34
emb|CBI39701.3| unnamed protein product [Vitis vinifera]              149   2e-34
ref|XP_002533032.1| multidrug resistance-associated protein 2, 6...   149   2e-34
ref|XP_003617730.1| Multidrug resistance protein ABC transporter...   149   3e-34

>ref|XP_003551345.1| PREDICTED: ABC transporter C family member 3-like [Glycine max]
          Length = 1490

 Score =  149 bits (377), Expect = 2e-34
 Identities = 68/125 (54%), Positives = 95/125 (76%), Gaps = 1/125 (0%)
 Frame = -1

Query: 375  LACGSCICVFVRAILVLTVGYKTATLLFQNMHSCVFRAPMSFFDATPSGRIISRVAGDQN 196
            LA GS  CV VR++L++TVGYKTAT+LF  MH C+FRAPMSFFD+TPSGR+++R + DQ+
Sbjct: 968  LAVGSSFCVLVRSMLLVTVGYKTATILFNKMHFCIFRAPMSFFDSTPSGRVLNRASTDQS 1027

Query: 195  YVDMSIPFLFGTFFVASIQLLGVIGVMARGTWQI-LIFFPVVVICIWYQQFCMGAGRELV 19
             VD  IP+  G+F  + IQLLG+I VM++  WQ+ ++F PV+ + IWYQQ+ + + REL 
Sbjct: 1028 TVDTDIPYQIGSFAFSMIQLLGIIAVMSQVAWQVFIVFIPVIAVSIWYQQYYIPSARELS 1087

Query: 18   RLAAL 4
            RL  +
Sbjct: 1088 RLVGV 1092


>ref|XP_003634755.1| PREDICTED: ABC transporter C family member 3-like [Vitis vinifera]
          Length = 1488

 Score =  149 bits (376), Expect = 2e-34
 Identities = 70/125 (56%), Positives = 92/125 (73%), Gaps = 1/125 (0%)
 Frame = -1

Query: 375  LACGSCICVFVRAILVLTVGYKTATLLFQNMHSCVFRAPMSFFDATPSGRIISRVAGDQN 196
            LA GS  CV  RA+L++T GYKTAT+LF  MH CVFRAPMSFFDATPSGRI++R + DQ+
Sbjct: 966  LAVGSSFCVLSRAMLLVTAGYKTATILFNKMHLCVFRAPMSFFDATPSGRILNRASADQS 1025

Query: 195  YVDMSIPFLFGTFFVASIQLLGVIGVMARGTWQI-LIFFPVVVICIWYQQFCMGAGRELV 19
             +D ++P   G F    IQLLG+I VM++  WQ+ ++F PV+  CIWYQQ+ + + REL 
Sbjct: 1026 TIDTTMPMQVGAFAFQLIQLLGIIAVMSQVAWQVFIVFIPVIATCIWYQQYYIPSARELS 1085

Query: 18   RLAAL 4
            RLA +
Sbjct: 1086 RLAGV 1090


>emb|CBI39701.3| unnamed protein product [Vitis vinifera]
          Length = 1355

 Score =  149 bits (376), Expect = 2e-34
 Identities = 70/125 (56%), Positives = 92/125 (73%), Gaps = 1/125 (0%)
 Frame = -1

Query: 375  LACGSCICVFVRAILVLTVGYKTATLLFQNMHSCVFRAPMSFFDATPSGRIISRVAGDQN 196
            LA GS  CV  RA+L++T GYKTAT+LF  MH CVFRAPMSFFDATPSGRI++R + DQ+
Sbjct: 833  LAVGSSFCVLSRAMLLVTAGYKTATILFNKMHLCVFRAPMSFFDATPSGRILNRASADQS 892

Query: 195  YVDMSIPFLFGTFFVASIQLLGVIGVMARGTWQI-LIFFPVVVICIWYQQFCMGAGRELV 19
             +D ++P   G F    IQLLG+I VM++  WQ+ ++F PV+  CIWYQQ+ + + REL 
Sbjct: 893  TIDTTMPMQVGAFAFQLIQLLGIIAVMSQVAWQVFIVFIPVIATCIWYQQYYIPSARELS 952

Query: 18   RLAAL 4
            RLA +
Sbjct: 953  RLAGV 957


>ref|XP_002533032.1| multidrug resistance-associated protein 2, 6 (mrp2, 6),
            abc-transoprter, putative [Ricinus communis]
            gi|223527170|gb|EEF29340.1| multidrug
            resistance-associated protein 2, 6 (mrp2, 6),
            abc-transoprter, putative [Ricinus communis]
          Length = 1233

 Score =  149 bits (376), Expect = 2e-34
 Identities = 69/122 (56%), Positives = 90/122 (73%), Gaps = 1/122 (0%)
 Frame = -1

Query: 375  LACGSCICVFVRAILVLTVGYKTATLLFQNMHSCVFRAPMSFFDATPSGRIISRVAGDQN 196
            LA GS  C+  R+ L++T GYKTATLLF  MH C+FRAPMSFFDATPSGRI++R + DQ+
Sbjct: 799  LAIGSSFCILARSTLLVTAGYKTATLLFNKMHLCIFRAPMSFFDATPSGRILNRASTDQS 858

Query: 195  YVDMSIPFLFGTFFVASIQLLGVIGVMARGTWQI-LIFFPVVVICIWYQQFCMGAGRELV 19
             VDM IP+  G    + IQLLG+I VM++  WQ+ ++F PV+  CIWYQQ+ + + REL 
Sbjct: 859  AVDMQIPYQVGAVAFSMIQLLGIIAVMSQVAWQVFIVFIPVIAACIWYQQYYIASARELS 918

Query: 18   RL 13
            RL
Sbjct: 919  RL 920


>ref|XP_003617730.1| Multidrug resistance protein ABC transporter family [Medicago
            truncatula] gi|355519065|gb|AET00689.1| Multidrug
            resistance protein ABC transporter family [Medicago
            truncatula]
          Length = 1521

 Score =  149 bits (375), Expect = 3e-34
 Identities = 67/124 (54%), Positives = 95/124 (76%), Gaps = 1/124 (0%)
 Frame = -1

Query: 372  ACGSCICVFVRAILVLTVGYKTATLLFQNMHSCVFRAPMSFFDATPSGRIISRVAGDQNY 193
            A GS +C+ VRA+L++TVGYKTAT+LF  MH C+FRAPMSFFD+TPSGRI++R + DQ+ 
Sbjct: 1005 AIGSSLCILVRALLLVTVGYKTATILFNKMHLCIFRAPMSFFDSTPSGRILNRASTDQSA 1064

Query: 192  VDMSIPFLFGTFFVASIQLLGVIGVMARGTWQI-LIFFPVVVICIWYQQFCMGAGRELVR 16
            VD  IP+  G+F  + IQLLG+I VM++  WQ+ ++F PV+ + IWYQ++ + + REL R
Sbjct: 1065 VDTDIPYQIGSFAFSIIQLLGIIAVMSQVAWQVFIVFIPVIAVSIWYQRYYLPSARELSR 1124

Query: 15   LAAL 4
            L  +
Sbjct: 1125 LGGV 1128


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