BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00028655
         (330 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001104938.1| elongation factor 1 alpha [Zea mays] gi|7230...    42   4e-08
emb|CAL07988.1| translation elongation factor 1 alpha [Platanus ...    41   1e-07
gb|ACI96243.1| elongation factor 1-alpha [Prunus persica]              41   1e-07
gb|ABB72813.1| elongation factor 1-alpha-like protein [Solanum t...    40   2e-07
ref|NP_001234035.1| elongation factor 1-alpha [Solanum lycopersi...    40   2e-07

>ref|NP_001104938.1| elongation factor 1 alpha [Zea mays] gi|7230389|gb|AAF42978.1|
           elongation factor 1 alpha [Zea mays]
          Length = 447

 Score = 41.6 bits (96), Expect(2) = 4e-08
 Identities = 18/22 (81%), Positives = 20/22 (90%)
 Frame = -2

Query: 197 TEVKSTELQHDALQEVLPGDNV 132
           TEVKS E+QH+ALQE LPGDNV
Sbjct: 275 TEVKSVEMQHEALQEALPGDNV 296



 Score = 40.4 bits (93), Expect(2) = 4e-08
 Identities = 17/24 (70%), Positives = 20/24 (83%)
 Frame = -3

Query: 304 VPVGRVESNIIKTGMVIAFGPTSL 233
           VPVGRVE+ +IK GMV+ FGPT L
Sbjct: 250 VPVGRVEAGVIKPGMVVTFGPTGL 273


>emb|CAL07988.1| translation elongation factor 1 alpha [Platanus x acerifolia]
          Length = 236

 Score = 41.2 bits (95), Expect(2) = 1e-07
 Identities = 17/24 (70%), Positives = 21/24 (87%)
 Frame = -3

Query: 304 VPVGRVESNIIKTGMVIAFGPTSL 233
           VPVGRVE+ ++K GMV+AFGPT L
Sbjct: 39  VPVGRVETGVLKPGMVVAFGPTGL 62



 Score = 39.7 bits (91), Expect(2) = 1e-07
 Identities = 17/22 (77%), Positives = 19/22 (86%)
 Frame = -2

Query: 197 TEVKSTELQHDALQEVLPGDNV 132
           TEVKS E+ H+ALQE LPGDNV
Sbjct: 64  TEVKSVEMHHEALQEALPGDNV 85


>gb|ACI96243.1| elongation factor 1-alpha [Prunus persica]
          Length = 447

 Score = 40.8 bits (94), Expect(2) = 1e-07
 Identities = 18/24 (75%), Positives = 20/24 (83%)
 Frame = -3

Query: 304 VPVGRVESNIIKTGMVIAFGPTSL 233
           VPVGRVE+ IIK GMV+ FGPT L
Sbjct: 250 VPVGRVETGIIKPGMVVTFGPTGL 273



 Score = 39.7 bits (91), Expect(2) = 1e-07
 Identities = 17/22 (77%), Positives = 19/22 (86%)
 Frame = -2

Query: 197 TEVKSTELQHDALQEVLPGDNV 132
           TEVKS E+ H+ALQE LPGDNV
Sbjct: 275 TEVKSVEMHHEALQEALPGDNV 296


>gb|ABB72813.1| elongation factor 1-alpha-like protein [Solanum tuberosum]
          Length = 448

 Score = 40.4 bits (93), Expect(2) = 2e-07
 Identities = 17/24 (70%), Positives = 20/24 (83%)
 Frame = -3

Query: 304 VPVGRVESNIIKTGMVIAFGPTSL 233
           VPVGRVE+ +IK GMV+ FGPT L
Sbjct: 250 VPVGRVETGVIKPGMVVTFGPTGL 273



 Score = 39.7 bits (91), Expect(2) = 2e-07
 Identities = 17/22 (77%), Positives = 19/22 (86%)
 Frame = -2

Query: 197 TEVKSTELQHDALQEVLPGDNV 132
           TEVKS E+ H+ALQE LPGDNV
Sbjct: 275 TEVKSVEMHHEALQEALPGDNV 296


>ref|NP_001234035.1| elongation factor 1-alpha [Solanum lycopersicum]
           gi|119150|sp|P17786.1|EF1A_SOLLC RecName:
           Full=Elongation factor 1-alpha; Short=EF-1-alpha
           gi|19273|emb|CAA32618.1| unnamed protein product
           [Solanum lycopersicum] gi|295810|emb|CAA37212.1|
           elongation factor 1-alpha [Solanum lycopersicum]
          Length = 448

 Score = 40.4 bits (93), Expect(2) = 2e-07
 Identities = 17/24 (70%), Positives = 20/24 (83%)
 Frame = -3

Query: 304 VPVGRVESNIIKTGMVIAFGPTSL 233
           VPVGRVE+ +IK GMV+ FGPT L
Sbjct: 250 VPVGRVETGVIKPGMVVTFGPTGL 273



 Score = 39.7 bits (91), Expect(2) = 2e-07
 Identities = 17/22 (77%), Positives = 19/22 (86%)
 Frame = -2

Query: 197 TEVKSTELQHDALQEVLPGDNV 132
           TEVKS E+ H+ALQE LPGDNV
Sbjct: 275 TEVKSVEMHHEALQEALPGDNV 296