BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00028648
         (820 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276556.1| PREDICTED: pentatricopeptide repeat-containi...   481   e-134
ref|XP_002324029.1| predicted protein [Populus trichocarpa] gi|2...   473   e-131
ref|XP_002517447.1| pentatricopeptide repeat-containing protein,...   467   e-129
dbj|BAE98404.1| hypothetical protein [Arabidopsis thaliana]           464   e-128
ref|NP_198814.1| pentatricopeptide repeat-containing protein [Ar...   464   e-128

>ref|XP_002276556.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39980,
            chloroplastic [Vitis vinifera]
            gi|296087770|emb|CBI35026.3| unnamed protein product
            [Vitis vinifera]
          Length = 675

 Score =  481 bits (1238), Expect = e-134
 Identities = 237/273 (86%), Positives = 256/273 (93%)
 Frame = -2

Query: 819  ADRLFWSMRRMGIDPNVVSYNPLLRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIK 640
            ADRLFWSMR+MGI+P +VSYN LLRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIK
Sbjct: 349  ADRLFWSMRKMGIEPGIVSYNTLLRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIK 408

Query: 639  IYGKSLEHEKATNLVQEMQSRGVEPNAVTYSTIISIWAKAGKLDRAAMLFQKLRTSGVEI 460
            IYGKSLEHEKATNLVQEMQ+RG+EPNA+TYSTIISIW KAGKLDRAAMLFQKLR+SG+EI
Sbjct: 409  IYGKSLEHEKATNLVQEMQNRGIEPNAITYSTIISIWDKAGKLDRAAMLFQKLRSSGIEI 468

Query: 459  DQVLYQTMIVAYERAGLVGHAKRLLHELKRPDNIPRETAITILAGAGRIEEATWIFRQAF 280
            DQVLYQTMIVAYERAGLV HAKRLLHELKRPDNIPRETAITILAGAGRIEEATW+FRQAF
Sbjct: 469  DQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRETAITILAGAGRIEEATWVFRQAF 528

Query: 279  IEGEVKDISVFGCMIDLLSRNKKHAGVIEVFEKMRAAGYFPDAISISQVLNAYGKLREFE 100
              GEVKDI+VFGCMIDL SRN+KH  VIEVF+KMR AGYFPD+  I+ VLNA GKLREFE
Sbjct: 529  DAGEVKDITVFGCMIDLFSRNRKHTNVIEVFDKMRGAGYFPDSNVIALVLNACGKLREFE 588

Query: 99   KAEIIYKEMQEERCVFPDEIHFQMLSLYGAQGN 1
            KA+ IYKEM+EE CVF DE+HFQMLSLYGA+G+
Sbjct: 589  KADAIYKEMEEEGCVFSDEVHFQMLSLYGARGD 621



 Score =  101 bits (252), Expect = 2e-19
 Identities = 60/269 (22%), Positives = 135/269 (50%), Gaps = 4/269 (1%)
 Frame = -2

Query: 798  MRRMGIDPNVVSYNPLLRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKSLE 619
            M +  +  ++V Y+ L+ +  +   + +AI +F  ++R  I  ++V YN+MI ++GK+  
Sbjct: 216  MEQDRVSGDLVLYSNLIELSRKLCDYSKAISIFSRLKRSGISPDLVAYNSMINVFGKAKL 275

Query: 618  HEKATNLVQEMQSRGVEPNAVTYSTIISIWAKAGKLDRAAMLFQKLRTSGVEIDQVLYQT 439
              +A  L+ EM++ GV P+ V+YST++S++ + GK   A  +F ++      +D      
Sbjct: 276  FREARLLLPEMRAGGVMPDTVSYSTLLSMYVENGKYVEALSVFSEMNEVRCPLDLTTCNV 335

Query: 438  MIVAYERAGLVGHAKRLLHELKR----PDNIPRETAITILAGAGRIEEATWIFRQAFIEG 271
            MI  Y +  +   A RL   +++    P  +   T + +   A    EA  +FR    + 
Sbjct: 336  MIDVYGQLDMAKEADRLFWSMRKMGIEPGIVSYNTLLRVYGEAELFGEAIHLFRLMQRKD 395

Query: 270  EVKDISVFGCMIDLLSRNKKHAGVIEVFEKMRAAGYFPDAISISQVLNAYGKLREFEKAE 91
              +++  +  MI +  ++ +H     + ++M+  G  P+AI+ S +++ + K  + ++A 
Sbjct: 396  IEQNVVTYNTMIKIYGKSLEHEKATNLVQEMQNRGIEPNAITYSTIISIWDKAGKLDRAA 455

Query: 90   IIYKEMQEERCVFPDEIHFQMLSLYGAQG 4
            +++++++         ++  M+  Y   G
Sbjct: 456  MLFQKLRSSGIEIDQVLYQTMIVAYERAG 484



 Score = 99.4 bits (246), Expect = 9e-19
 Identities = 72/273 (26%), Positives = 130/273 (47%), Gaps = 7/273 (2%)
 Frame = -2

Query: 810 LFWSMRRMGIDPNVVSYNPLLRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYG 631
           L W        P+V +YN ++R    A+ +  A  LF  M+++ +  +  TY+T+I  +G
Sbjct: 142 LDWINEEASYSPSVFAYNVVIRNVLRAKQWELAHGLFEEMRQRALAPDRYTYSTLITHFG 201

Query: 630 KSLEHEKATNLVQEMQSRGVEPNAVTYSTIISIWAKAGKLDRAAMLFQKLRTSGVEIDQV 451
           K    + A + +Q+M+   V  + V YS +I +  K     +A  +F +L+ SG+  D V
Sbjct: 202 KEGMFDSALSWLQKMEQDRVSGDLVLYSNLIELSRKLCDYSKAISIFSRLKRSGISPDLV 261

Query: 450 LYQTMIVAYERAGLVGHAKRLLHELK----RPDNIPRETAITILAGAGRIEEATWIFRQA 283
            Y +MI  + +A L   A+ LL E++     PD +   T +++    G+  EA  +F + 
Sbjct: 262 AYNSMINVFGKAKLFREARLLLPEMRAGGVMPDTVSYSTLLSMYVENGKYVEALSVFSEM 321

Query: 282 FIEGEVK---DISVFGCMIDLLSRNKKHAGVIEVFEKMRAAGYFPDAISISQVLNAYGKL 112
               EV+   D++    MID+  +         +F  MR  G  P  +S + +L  YG+ 
Sbjct: 322 ---NEVRCPLDLTTCNVMIDVYGQLDMAKEADRLFWSMRKMGIEPGIVSYNTLLRVYGEA 378

Query: 111 REFEKAEIIYKEMQEERCVFPDEIHFQMLSLYG 13
             F +A  +++ MQ +        +  M+ +YG
Sbjct: 379 ELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYG 411


>ref|XP_002324029.1| predicted protein [Populus trichocarpa] gi|222867031|gb|EEF04162.1|
            predicted protein [Populus trichocarpa]
          Length = 629

 Score =  473 bits (1217), Expect = e-131
 Identities = 232/271 (85%), Positives = 252/271 (92%)
 Frame = -2

Query: 819  ADRLFWSMRRMGIDPNVVSYNPLLRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIK 640
            ADRLFWSMR+MGI+PNVVSYN LLRVYGE ELFGEAIHLFRLMQ+KDIEQNVVTYNTMIK
Sbjct: 301  ADRLFWSMRKMGIEPNVVSYNTLLRVYGETELFGEAIHLFRLMQKKDIEQNVVTYNTMIK 360

Query: 639  IYGKSLEHEKATNLVQEMQSRGVEPNAVTYSTIISIWAKAGKLDRAAMLFQKLRTSGVEI 460
            +YGKSLEHEKATNL+QEMQ+RG+EPNA+TYSTIISIW KAGKLDRAAMLFQKLR+SGVEI
Sbjct: 361  VYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIISIWGKAGKLDRAAMLFQKLRSSGVEI 420

Query: 459  DQVLYQTMIVAYERAGLVGHAKRLLHELKRPDNIPRETAITILAGAGRIEEATWIFRQAF 280
            DQVLYQTMIVAYER+GLV HAKRLLHELK PD+IPRETAI ILA AGRIEEATW+FRQAF
Sbjct: 421  DQVLYQTMIVAYERSGLVAHAKRLLHELKHPDSIPRETAIKILARAGRIEEATWVFRQAF 480

Query: 279  IEGEVKDISVFGCMIDLLSRNKKHAGVIEVFEKMRAAGYFPDAISISQVLNAYGKLREFE 100
              GEVKDISVFGCM+DL SRN+K A VIEVFEKMR AGYFPD+  I+ VLNAYGKL EFE
Sbjct: 481  DAGEVKDISVFGCMVDLFSRNRKPANVIEVFEKMRGAGYFPDSNVIALVLNAYGKLHEFE 540

Query: 99   KAEIIYKEMQEERCVFPDEIHFQMLSLYGAQ 7
            KA+ +YKEMQEE CVFPDE+HFQMLSLYGA+
Sbjct: 541  KADALYKEMQEEECVFPDEVHFQMLSLYGAR 571



 Score =  105 bits (261), Expect = 2e-20
 Identities = 62/275 (22%), Positives = 139/275 (50%), Gaps = 6/275 (2%)
 Frame = -2

Query: 810 LFW--SMRRMGIDPNVVSYNPLLRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKI 637
           LFW   M +  +  ++V Y+ L+ +  +   + +AI +F  ++R  I  ++V YN+MI +
Sbjct: 162 LFWLQQMEQDRVSGDLVLYSNLIELSRKLCDYSKAISIFMRLKRSGIMPDLVAYNSMINV 221

Query: 636 YGKSLEHEKATNLVQEMQSRGVEPNAVTYSTIISIWAKAGKLDRAAMLFQKLRTSGVEID 457
           +GK+    +A  L++EM+  GV P+ V+YST++S++ +  K   A  +F ++  +   +D
Sbjct: 222 FGKAKLFREAKLLMKEMREVGVMPDTVSYSTLLSVYVENEKFVEALSVFAEMNEAKCPLD 281

Query: 456 QVLYQTMIVAYERAGLVGHAKRLLHELKR----PDNIPRETAITILAGAGRIEEATWIFR 289
                 MI  Y +  +   A RL   +++    P+ +   T + +        EA  +FR
Sbjct: 282 LTTCNVMIDVYGQLDMAKEADRLFWSMRKMGIEPNVVSYNTLLRVYGETELFGEAIHLFR 341

Query: 288 QAFIEGEVKDISVFGCMIDLLSRNKKHAGVIEVFEKMRAAGYFPDAISISQVLNAYGKLR 109
               +   +++  +  MI +  ++ +H     + ++M+  G  P+AI+ S +++ +GK  
Sbjct: 342 LMQKKDIEQNVVTYNTMIKVYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIISIWGKAG 401

Query: 108 EFEKAEIIYKEMQEERCVFPDEIHFQMLSLYGAQG 4
           + ++A +++++++         ++  M+  Y   G
Sbjct: 402 KLDRAAMLFQKLRSSGVEIDQVLYQTMIVAYERSG 436



 Score = 95.5 bits (236), Expect = 1e-17
 Identities = 67/259 (25%), Positives = 125/259 (48%), Gaps = 4/259 (1%)
 Frame = -2

Query: 777 PNVVSYNPLLRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKSLEHEKATNL 598
           P+V +YN +LR    A+ +  A  LF  M+ + +  +  TY+T+I  +GK+   + +   
Sbjct: 105 PSVFAYNVVLRNVLRAKQWDHAHGLFDEMRNRALAPDRYTYSTLITHFGKAGMFDASLFW 164

Query: 597 VQEMQSRGVEPNAVTYSTIISIWAKAGKLDRAAMLFQKLRTSGVEIDQVLYQTMIVAYER 418
           +Q+M+   V  + V YS +I +  K     +A  +F +L+ SG+  D V Y +MI  + +
Sbjct: 165 LQQMEQDRVSGDLVLYSNLIELSRKLCDYSKAISIFMRLKRSGIMPDLVAYNSMINVFGK 224

Query: 417 AGLVGHAKRLLHELKR----PDNIPRETAITILAGAGRIEEATWIFRQAFIEGEVKDISV 250
           A L   AK L+ E++     PD +   T +++     +  EA  +F +        D++ 
Sbjct: 225 AKLFREAKLLMKEMREVGVMPDTVSYSTLLSVYVENEKFVEALSVFAEMNEAKCPLDLTT 284

Query: 249 FGCMIDLLSRNKKHAGVIEVFEKMRAAGYFPDAISISQVLNAYGKLREFEKAEIIYKEMQ 70
              MID+  +         +F  MR  G  P+ +S + +L  YG+   F +A  +++ MQ
Sbjct: 285 CNVMIDVYGQLDMAKEADRLFWSMRKMGIEPNVVSYNTLLRVYGETELFGEAIHLFRLMQ 344

Query: 69  EERCVFPDEIHFQMLSLYG 13
           ++        +  M+ +YG
Sbjct: 345 KKDIEQNVVTYNTMIKVYG 363


>ref|XP_002517447.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223543458|gb|EEF44989.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 654

 Score =  467 bits (1201), Expect = e-129
 Identities = 231/271 (85%), Positives = 251/271 (92%)
 Frame = -2

Query: 819  ADRLFWSMRRMGIDPNVVSYNPLLRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIK 640
            ADRLFWSMR+MGI+PNVVSYN LL+VYGEAELFGEAIHLFRLMQRK+IEQNVVTYNTMIK
Sbjct: 328  ADRLFWSMRKMGIEPNVVSYNTLLKVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIK 387

Query: 639  IYGKSLEHEKATNLVQEMQSRGVEPNAVTYSTIISIWAKAGKLDRAAMLFQKLRTSGVEI 460
            IYGKSLEHEKATNLVQEMQ RG+EPNA+TYSTIISIW KAGKLDRAAMLFQKLR+SGVEI
Sbjct: 388  IYGKSLEHEKATNLVQEMQKRGIEPNAITYSTIISIWGKAGKLDRAAMLFQKLRSSGVEI 447

Query: 459  DQVLYQTMIVAYERAGLVGHAKRLLHELKRPDNIPRETAITILAGAGRIEEATWIFRQAF 280
            DQVLYQTMIVAYERAGLV HAKRLLH+LK PD IPR+TAI ILA AGRIEEATW+FRQAF
Sbjct: 448  DQVLYQTMIVAYERAGLVAHAKRLLHDLKCPDIIPRDTAIKILARAGRIEEATWVFRQAF 507

Query: 279  IEGEVKDISVFGCMIDLLSRNKKHAGVIEVFEKMRAAGYFPDAISISQVLNAYGKLREFE 100
              GEVKDISVF CMI+L SRNK+ A V+EVFEKMR AGYFPD+  I+ VLNAYGKLREFE
Sbjct: 508  DAGEVKDISVFRCMIELFSRNKRPANVVEVFEKMRGAGYFPDSDVIALVLNAYGKLREFE 567

Query: 99   KAEIIYKEMQEERCVFPDEIHFQMLSLYGAQ 7
            KA+ +Y+EMQEE CVFPDE+HFQMLSLYGA+
Sbjct: 568  KADAVYREMQEEECVFPDEVHFQMLSLYGAR 598



 Score =  110 bits (275), Expect = 4e-22
 Identities = 65/277 (23%), Positives = 142/277 (51%), Gaps = 6/277 (2%)
 Frame = -2

Query: 816  DRLFW--SMRRMGIDPNVVSYNPLLRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMI 643
            + LFW   M +  +  ++V Y+ L+ +  +   + +AI +F  ++R  I  ++V YN+MI
Sbjct: 187  ESLFWLQQMEQDRVSGDLVLYSNLIELSRKLCDYSKAISIFMRLKRSGITPDLVAYNSMI 246

Query: 642  KIYGKSLEHEKATNLVQEMQSRGVEPNAVTYSTIISIWAKAGKLDRAAMLFQKLRTSGVE 463
             ++GK+    +A  LV EM+  GV P+ V+YST++S++ +  K   A  +F ++  +   
Sbjct: 247  NVFGKARLFREARMLVHEMREVGVLPDTVSYSTLLSVYVENEKFVEALSVFAEMNEANCS 306

Query: 462  IDQVLYQTMIVAYERAGLVGHAKRLLHELKR----PDNIPRETAITILAGAGRIEEATWI 295
            +D +    MI  Y +  +V  A RL   +++    P+ +   T + +   A    EA  +
Sbjct: 307  LDLMTCNIMIDVYGQLDMVKEADRLFWSMRKMGIEPNVVSYNTLLKVYGEAELFGEAIHL 366

Query: 294  FRQAFIEGEVKDISVFGCMIDLLSRNKKHAGVIEVFEKMRAAGYFPDAISISQVLNAYGK 115
            FR    +   +++  +  MI +  ++ +H     + ++M+  G  P+AI+ S +++ +GK
Sbjct: 367  FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLVQEMQKRGIEPNAITYSTIISIWGK 426

Query: 114  LREFEKAEIIYKEMQEERCVFPDEIHFQMLSLYGAQG 4
              + ++A +++++++         ++  M+  Y   G
Sbjct: 427  AGKLDRAAMLFQKLRSSGVEIDQVLYQTMIVAYERAG 463



 Score = 99.8 bits (247), Expect = 7e-19
 Identities = 69/270 (25%), Positives = 128/270 (47%), Gaps = 4/270 (1%)
 Frame = -2

Query: 810 LFWSMRRMGIDPNVVSYNPLLRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYG 631
           L W        P+V +YN +LR    A+ +  A  LF  M+++ +  +  TY+T+I  +G
Sbjct: 121 LDWINEVARYSPSVFAYNVVLRNVLRAKKWDLAHGLFDEMRQRALSPDRYTYSTLITSFG 180

Query: 630 KSLEHEKATNLVQEMQSRGVEPNAVTYSTIISIWAKAGKLDRAAMLFQKLRTSGVEIDQV 451
           K+   +++   +Q+M+   V  + V YS +I +  K     +A  +F +L+ SG+  D V
Sbjct: 181 KAGMFDESLFWLQQMEQDRVSGDLVLYSNLIELSRKLCDYSKAISIFMRLKRSGITPDLV 240

Query: 450 LYQTMIVAYERAGLVGHAKRLLHELKR----PDNIPRETAITILAGAGRIEEATWIFRQA 283
            Y +MI  + +A L   A+ L+HE++     PD +   T +++     +  EA  +F + 
Sbjct: 241 AYNSMINVFGKARLFREARMLVHEMREVGVLPDTVSYSTLLSVYVENEKFVEALSVFAEM 300

Query: 282 FIEGEVKDISVFGCMIDLLSRNKKHAGVIEVFEKMRAAGYFPDAISISQVLNAYGKLREF 103
                  D+     MID+  +         +F  MR  G  P+ +S + +L  YG+   F
Sbjct: 301 NEANCSLDLMTCNIMIDVYGQLDMVKEADRLFWSMRKMGIEPNVVSYNTLLKVYGEAELF 360

Query: 102 EKAEIIYKEMQEERCVFPDEIHFQMLSLYG 13
            +A  +++ MQ +        +  M+ +YG
Sbjct: 361 GEAIHLFRLMQRKEIEQNVVTYNTMIKIYG 390


>dbj|BAE98404.1| hypothetical protein [Arabidopsis thaliana]
          Length = 546

 Score =  464 bits (1194), Expect = e-128
 Identities = 227/271 (83%), Positives = 250/271 (92%)
 Frame = -2

Query: 819  ADRLFWSMRRMGIDPNVVSYNPLLRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIK 640
            ADRLFWS+R+M I+PNVVSYN +LRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIK
Sbjct: 217  ADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIK 276

Query: 639  IYGKSLEHEKATNLVQEMQSRGVEPNAVTYSTIISIWAKAGKLDRAAMLFQKLRTSGVEI 460
            IYGK++EHEKATNLVQEMQSRG+EPNA+TYSTIISIW KAGKLDRAA LFQKLR+SGVEI
Sbjct: 277  IYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEI 336

Query: 459  DQVLYQTMIVAYERAGLVGHAKRLLHELKRPDNIPRETAITILAGAGRIEEATWIFRQAF 280
            DQVLYQTMIVAYER GL+GHAKRLLHELK PDNIPRETAITILA AGR EEATW+FRQAF
Sbjct: 337  DQVLYQTMIVAYERVGLMGHAKRLLHELKLPDNIPRETAITILAKAGRTEEATWVFRQAF 396

Query: 279  IEGEVKDISVFGCMIDLLSRNKKHAGVIEVFEKMRAAGYFPDAISISQVLNAYGKLREFE 100
              GEVKDISVFGCMI+L SRN+++  VIEVFEKMR AGYFPD+  I+ VLNAYGK REFE
Sbjct: 397  ESGEVKDISVFGCMINLYSRNQRYVNVIEVFEKMRTAGYFPDSNVIAMVLNAYGKQREFE 456

Query: 99   KAEIIYKEMQEERCVFPDEIHFQMLSLYGAQ 7
            KA+ +Y+EMQEE CVFPDE+HFQMLSLY ++
Sbjct: 457  KADTVYREMQEEGCVFPDEVHFQMLSLYSSK 487



 Score =  109 bits (273), Expect = 6e-22
 Identities = 68/269 (25%), Positives = 136/269 (50%), Gaps = 4/269 (1%)
 Frame = -2

Query: 798 MRRMGIDPNVVSYNPLLRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKSLE 619
           M +  +  ++V Y+ L+ +      + +AI +F  ++R  I  ++V YN+MI +YGK+  
Sbjct: 84  MEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMINVYGKAKL 143

Query: 618 HEKATNLVQEMQSRGVEPNAVTYSTIISIWAKAGKLDRAAMLFQKLRTSGVEIDQVLYQT 439
             +A  L++EM   GV PN V+YST++S++ +  K   A  +F +++     +D      
Sbjct: 144 FREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCALDLTTCNI 203

Query: 438 MIVAYERAGLVGHAKRLLHELKRPDNIPRETAI-TILAGAGRIE---EATWIFRQAFIEG 271
           MI  Y +  +V  A RL   L++ D  P   +  TIL   G  E   EA  +FR    + 
Sbjct: 204 MIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKD 263

Query: 270 EVKDISVFGCMIDLLSRNKKHAGVIEVFEKMRAAGYFPDAISISQVLNAYGKLREFEKAE 91
             +++  +  MI +  +  +H     + ++M++ G  P+AI+ S +++ +GK  + ++A 
Sbjct: 264 IEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAA 323

Query: 90  IIYKEMQEERCVFPDEIHFQMLSLYGAQG 4
            ++++++         ++  M+  Y   G
Sbjct: 324 TLFQKLRSSGVEIDQVLYQTMIVAYERVG 352



 Score = 94.7 bits (234), Expect = 2e-17
 Identities = 67/270 (24%), Positives = 125/270 (46%), Gaps = 4/270 (1%)
 Frame = -2

Query: 810 LFWSMRRMGIDPNVVSYNPLLRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYG 631
           L W        P+V +YN +LR    A+ F  A  LF  M+++ +  +  TY+T+I  +G
Sbjct: 10  LDWVHEEAKYTPSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSFG 69

Query: 630 KSLEHEKATNLVQEMQSRGVEPNAVTYSTIISIWAKAGKLDRAAMLFQKLRTSGVEIDQV 451
           K    + A + +Q+M+   V  + V YS +I +  +     +A  +F +L+ SG+  D V
Sbjct: 70  KEGMFDSALSWLQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLV 129

Query: 450 LYQTMIVAYERAGLVGHAKRLLHELKR----PDNIPRETAITILAGAGRIEEATWIFRQA 283
            Y +MI  Y +A L   A+ L+ E+      P+ +   T +++     +  EA  +F + 
Sbjct: 130 AYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEM 189

Query: 282 FIEGEVKDISVFGCMIDLLSRNKKHAGVIEVFEKMRAAGYFPDAISISQVLNAYGKLREF 103
                  D++    MID+  +         +F  +R     P+ +S + +L  YG+   F
Sbjct: 190 KEVNCALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELF 249

Query: 102 EKAEIIYKEMQEERCVFPDEIHFQMLSLYG 13
            +A  +++ MQ +        +  M+ +YG
Sbjct: 250 GEAIHLFRLMQRKDIEQNVVTYNTMIKIYG 279


>ref|NP_198814.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
            gi|75171449|sp|Q9FLD8.1|PP408_ARATH RecName:
            Full=Pentatricopeptide repeat-containing protein
            At5g39980, chloroplastic; Flags: Precursor
            gi|10176990|dbj|BAB10222.1| unnamed protein product
            [Arabidopsis thaliana] gi|332007115|gb|AED94498.1|
            pentatricopeptide repeat-containing protein [Arabidopsis
            thaliana]
          Length = 678

 Score =  464 bits (1194), Expect = e-128
 Identities = 227/271 (83%), Positives = 250/271 (92%)
 Frame = -2

Query: 819  ADRLFWSMRRMGIDPNVVSYNPLLRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIK 640
            ADRLFWS+R+M I+PNVVSYN +LRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIK
Sbjct: 349  ADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIK 408

Query: 639  IYGKSLEHEKATNLVQEMQSRGVEPNAVTYSTIISIWAKAGKLDRAAMLFQKLRTSGVEI 460
            IYGK++EHEKATNLVQEMQSRG+EPNA+TYSTIISIW KAGKLDRAA LFQKLR+SGVEI
Sbjct: 409  IYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEI 468

Query: 459  DQVLYQTMIVAYERAGLVGHAKRLLHELKRPDNIPRETAITILAGAGRIEEATWIFRQAF 280
            DQVLYQTMIVAYER GL+GHAKRLLHELK PDNIPRETAITILA AGR EEATW+FRQAF
Sbjct: 469  DQVLYQTMIVAYERVGLMGHAKRLLHELKLPDNIPRETAITILAKAGRTEEATWVFRQAF 528

Query: 279  IEGEVKDISVFGCMIDLLSRNKKHAGVIEVFEKMRAAGYFPDAISISQVLNAYGKLREFE 100
              GEVKDISVFGCMI+L SRN+++  VIEVFEKMR AGYFPD+  I+ VLNAYGK REFE
Sbjct: 529  ESGEVKDISVFGCMINLYSRNQRYVNVIEVFEKMRTAGYFPDSNVIAMVLNAYGKQREFE 588

Query: 99   KAEIIYKEMQEERCVFPDEIHFQMLSLYGAQ 7
            KA+ +Y+EMQEE CVFPDE+HFQMLSLY ++
Sbjct: 589  KADTVYREMQEEGCVFPDEVHFQMLSLYSSK 619



 Score =  109 bits (273), Expect = 6e-22
 Identities = 68/269 (25%), Positives = 136/269 (50%), Gaps = 4/269 (1%)
 Frame = -2

Query: 798  MRRMGIDPNVVSYNPLLRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKSLE 619
            M +  +  ++V Y+ L+ +      + +AI +F  ++R  I  ++V YN+MI +YGK+  
Sbjct: 216  MEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMINVYGKAKL 275

Query: 618  HEKATNLVQEMQSRGVEPNAVTYSTIISIWAKAGKLDRAAMLFQKLRTSGVEIDQVLYQT 439
              +A  L++EM   GV PN V+YST++S++ +  K   A  +F +++     +D      
Sbjct: 276  FREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCALDLTTCNI 335

Query: 438  MIVAYERAGLVGHAKRLLHELKRPDNIPRETAI-TILAGAGRIE---EATWIFRQAFIEG 271
            MI  Y +  +V  A RL   L++ D  P   +  TIL   G  E   EA  +FR    + 
Sbjct: 336  MIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKD 395

Query: 270  EVKDISVFGCMIDLLSRNKKHAGVIEVFEKMRAAGYFPDAISISQVLNAYGKLREFEKAE 91
              +++  +  MI +  +  +H     + ++M++ G  P+AI+ S +++ +GK  + ++A 
Sbjct: 396  IEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAA 455

Query: 90   IIYKEMQEERCVFPDEIHFQMLSLYGAQG 4
             ++++++         ++  M+  Y   G
Sbjct: 456  TLFQKLRSSGVEIDQVLYQTMIVAYERVG 484



 Score = 94.7 bits (234), Expect = 2e-17
 Identities = 67/270 (24%), Positives = 125/270 (46%), Gaps = 4/270 (1%)
 Frame = -2

Query: 810 LFWSMRRMGIDPNVVSYNPLLRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYG 631
           L W        P+V +YN +LR    A+ F  A  LF  M+++ +  +  TY+T+I  +G
Sbjct: 142 LDWVHEEAKYTPSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSFG 201

Query: 630 KSLEHEKATNLVQEMQSRGVEPNAVTYSTIISIWAKAGKLDRAAMLFQKLRTSGVEIDQV 451
           K    + A + +Q+M+   V  + V YS +I +  +     +A  +F +L+ SG+  D V
Sbjct: 202 KEGMFDSALSWLQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLV 261

Query: 450 LYQTMIVAYERAGLVGHAKRLLHELKR----PDNIPRETAITILAGAGRIEEATWIFRQA 283
            Y +MI  Y +A L   A+ L+ E+      P+ +   T +++     +  EA  +F + 
Sbjct: 262 AYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEM 321

Query: 282 FIEGEVKDISVFGCMIDLLSRNKKHAGVIEVFEKMRAAGYFPDAISISQVLNAYGKLREF 103
                  D++    MID+  +         +F  +R     P+ +S + +L  YG+   F
Sbjct: 322 KEVNCALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELF 381

Query: 102 EKAEIIYKEMQEERCVFPDEIHFQMLSLYG 13
            +A  +++ MQ +        +  M+ +YG
Sbjct: 382 GEAIHLFRLMQRKDIEQNVVTYNTMIKIYG 411