BLASTX nr result

ID: Coptis21_contig00028643 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00028643
         (409 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002297914.1| predicted protein [Populus trichocarpa] gi|2...   111   7e-23
ref|XP_002530125.1| fk506-binding protein, putative [Ricinus com...   105   4e-21
gb|AFK40756.1| unknown [Medicago truncatula]                          104   9e-21
gb|ACJ85988.1| unknown [Medicago truncatula]                          104   9e-21
ref|XP_002272628.1| PREDICTED: FKBP-type peptidyl-prolyl cis-tra...    97   1e-18

>ref|XP_002297914.1| predicted protein [Populus trichocarpa] gi|222845172|gb|EEE82719.1|
           predicted protein [Populus trichocarpa]
          Length = 209

 Score =  111 bits (277), Expect = 7e-23
 Identities = 65/121 (53%), Positives = 76/121 (62%), Gaps = 5/121 (4%)
 Frame = -3

Query: 350 HTPKKISIPTKDL----VHITNATSTR-SVSSQHNLELQQPLHLSKRETIGLSFCLGLTS 186
           +TP+ +S P   L    +  T  +S + S  SQ N   Q  L   +RE IGL FC G   
Sbjct: 11  YTPRNLSAPNTTLPAKNLDTTKVSSIKFSSHSQENFSRQLQL-FKRREAIGLGFCAGFLD 69

Query: 185 VFTQQPQIALAEEALKCQFTVAPSGLEFCDQVVGYGLEATTGQLIKAHYVGKLENGKIFD 6
           V  QQ   A AEEA  C+ TVAPSGL FCD++VG GLEA  GQLIKAHYVGKLE+GKIFD
Sbjct: 70  VLLQQQLTATAEEA-PCELTVAPSGLAFCDKIVGTGLEAVKGQLIKAHYVGKLESGKIFD 128

Query: 5   S 3
           S
Sbjct: 129 S 129


>ref|XP_002530125.1| fk506-binding protein, putative [Ricinus communis]
           gi|223530379|gb|EEF32269.1| fk506-binding protein,
           putative [Ricinus communis]
          Length = 188

 Score =  105 bits (262), Expect = 4e-21
 Identities = 64/136 (47%), Positives = 75/136 (55%), Gaps = 20/136 (14%)
 Frame = -3

Query: 350 HTPKKISIPTKDLVHITNA------TSTRSVSSQHNLE-------LQQPLHLSKRETIGL 210
           HTP K+ I    L   +N       ++ +  SS HN E         Q   L +RE IG+
Sbjct: 13  HTPTKLRISNTSLPISSNPDTAQPPSNLKFKSSAHNQESYNCQQKASQVSLLKRREAIGV 72

Query: 209 SFCLGLTSVFTQQPQIALAEEALK-------CQFTVAPSGLEFCDQVVGYGLEATTGQLI 51
            FC+GL  V  Q    A AE A         C+ TVAPSGL FCD+VVG G EA  GQLI
Sbjct: 73  GFCIGLVDVLLQSKPTAAAEAAAAAAAAGGPCELTVAPSGLAFCDKVVGIGPEAVKGQLI 132

Query: 50  KAHYVGKLENGKIFDS 3
           KAHYVGKLENGK+FDS
Sbjct: 133 KAHYVGKLENGKVFDS 148


>gb|AFK40756.1| unknown [Medicago truncatula]
          Length = 207

 Score =  104 bits (259), Expect = 9e-21
 Identities = 60/114 (52%), Positives = 75/114 (65%), Gaps = 4/114 (3%)
 Frame = -3

Query: 332 SIPTKDLVHITNATSTRSVSSQHN--LELQQPLHLSKRETIGLSFCLGLTSVFTQQPQI- 162
           S+  + L H+ + T+T SV  Q    + +Q+   L +RE IGLS   GL     Q P I 
Sbjct: 15  SLQPQKLNHLNSLTTTCSVQVQQQPPVLVQKDNQLKRREAIGLSLSFGLLHSLLQ-PIIP 73

Query: 161 -ALAEEALKCQFTVAPSGLEFCDQVVGYGLEATTGQLIKAHYVGKLENGKIFDS 3
            A A EA+ CQ TVAPSGL +CD+VVGYG +A  GQLIKAHYVG+LENGK+FDS
Sbjct: 74  TATAAEAVPCQLTVAPSGLSYCDKVVGYGPQAVKGQLIKAHYVGRLENGKVFDS 127


>gb|ACJ85988.1| unknown [Medicago truncatula]
          Length = 155

 Score =  104 bits (259), Expect = 9e-21
 Identities = 60/114 (52%), Positives = 75/114 (65%), Gaps = 4/114 (3%)
 Frame = -3

Query: 332 SIPTKDLVHITNATSTRSVSSQHN--LELQQPLHLSKRETIGLSFCLGLTSVFTQQPQI- 162
           S+  + L H+ + T+T SV  Q    + +Q+   L +RE IGLS   GL     Q P I 
Sbjct: 15  SLQPQKLNHLNSLTTTCSVQVQQQPPVLVQKDNQLKRREAIGLSLSFGLLHSLLQ-PIIP 73

Query: 161 -ALAEEALKCQFTVAPSGLEFCDQVVGYGLEATTGQLIKAHYVGKLENGKIFDS 3
            A A EA+ CQ TVAPSGL +CD+VVGYG +A  GQLIKAHYVG+LENGK+FDS
Sbjct: 74  TATAAEAVPCQLTVAPSGLSYCDKVVGYGPQAVKGQLIKAHYVGRLENGKVFDS 127


>ref|XP_002272628.1| PREDICTED: FKBP-type peptidyl-prolyl cis-trans isomerase 3,
           chloroplastic [Vitis vinifera]
           gi|297738045|emb|CBI27246.3| unnamed protein product
           [Vitis vinifera]
          Length = 216

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 53/106 (50%), Positives = 65/106 (61%)
 Frame = -3

Query: 320 KDLVHITNATSTRSVSSQHNLELQQPLHLSKRETIGLSFCLGLTSVFTQQPQIALAEEAL 141
           K L H   ++S R +    N  L       +RE IG  FC  +  VF Q  Q ++A +  
Sbjct: 37  KILSHHQESSSPRPLQINENSPL-----FGRREAIGFGFCFSILDVFLQA-QPSVAAQTA 90

Query: 140 KCQFTVAPSGLEFCDQVVGYGLEATTGQLIKAHYVGKLENGKIFDS 3
            C+ TVAPSGL FCD+VVG G EA  GQLIKAHYVGKLE+GK+FDS
Sbjct: 91  PCELTVAPSGLAFCDKVVGTGPEAVEGQLIKAHYVGKLESGKVFDS 136


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