BLASTX nr result
ID: Coptis21_contig00028620
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00028620 (307 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002324486.1| predicted protein [Populus trichocarpa] gi|2... 95 7e-18 ref|XP_002526213.1| r2r3-myb transcription factor, putative [Ric... 91 1e-16 gb|AEF14025.1| MYB5 [Gossypium barbadense] 78 6e-13 emb|CBI17787.3| unnamed protein product [Vitis vinifera] 78 8e-13 ref|XP_002270766.1| PREDICTED: uncharacterized protein LOC100256... 78 8e-13 >ref|XP_002324486.1| predicted protein [Populus trichocarpa] gi|222865920|gb|EEF03051.1| predicted protein [Populus trichocarpa] Length = 366 Score = 94.7 bits (234), Expect = 7e-18 Identities = 39/75 (52%), Positives = 54/75 (72%) Frame = +1 Query: 1 AELGELLHNKAGSYMVNGDQTNEFDCFKEMDGAKESLLWWDNSFDAKSTPSSSWDSASVL 180 +EL L+NK + GDQ EFDCFKEM+G+++++ WW N F+ KS S+SWDS SVL Sbjct: 292 SELENFLNNKTSGFTAQGDQIGEFDCFKEMNGSRDNMNWWSNDFETKSASSNSWDSTSVL 351 Query: 181 QQEGLFQECVLGYDL 225 Q EG+FQ+ LGY++ Sbjct: 352 QSEGMFQDYELGYNM 366 >ref|XP_002526213.1| r2r3-myb transcription factor, putative [Ricinus communis] gi|223534452|gb|EEF36154.1| r2r3-myb transcription factor, putative [Ricinus communis] Length = 417 Score = 90.9 bits (224), Expect = 1e-16 Identities = 41/76 (53%), Positives = 54/76 (71%), Gaps = 1/76 (1%) Frame = +1 Query: 1 AELGELLHNKAGSYMVNGDQTNEFDCFKEMDGAKESLLWWDNSFDAKSTPSSSWDSASVL 180 AEL L NK ++ DQ EFDCF+EM+G+K+SL+WW N F+ KS S+SWDS SVL Sbjct: 342 AELENFLSNKTSGFVSQEDQITEFDCFREMNGSKDSLVWWSNDFETKSASSNSWDSTSVL 401 Query: 181 QQEGLFQEC-VLGYDL 225 Q EG+FQ+ LGY++ Sbjct: 402 QSEGMFQDYHELGYNM 417 >gb|AEF14025.1| MYB5 [Gossypium barbadense] Length = 359 Score = 78.2 bits (191), Expect = 6e-13 Identities = 35/77 (45%), Positives = 50/77 (64%), Gaps = 3/77 (3%) Frame = +1 Query: 4 ELGELLHNKA---GSYMVNGDQTNEFDCFKEMDGAKESLLWWDNSFDAKSTPSSSWDSAS 174 EL L++K+ G Y N+ DCF++++G+K+S +WW FDAKS S+SWDS S Sbjct: 283 ELDVFLNHKSSTTGGYPQEDQTVNQLDCFRDINGSKDSSIWWPTDFDAKSASSNSWDSTS 342 Query: 175 VLQQEGLFQECVLGYDL 225 VLQ G+FQ+ LGY + Sbjct: 343 VLQSNGMFQDFELGYPM 359 >emb|CBI17787.3| unnamed protein product [Vitis vinifera] Length = 365 Score = 77.8 bits (190), Expect = 8e-13 Identities = 37/75 (49%), Positives = 49/75 (65%) Frame = +1 Query: 1 AELGELLHNKAGSYMVNGDQTNEFDCFKEMDGAKESLLWWDNSFDAKSTPSSSWDSASVL 180 AEL + L+NK ++ +Q E +DG+K+SL WW N FD KS S SWDS SV+ Sbjct: 296 AELDDFLNNKMVGFLPQEEQMTE------IDGSKDSLAWWSNDFDTKSASSHSWDSTSVI 349 Query: 181 QQEGLFQECVLGYDL 225 Q EG+FQ+ VLGY+L Sbjct: 350 QSEGMFQDYVLGYNL 364 >ref|XP_002270766.1| PREDICTED: uncharacterized protein LOC100256441 [Vitis vinifera] Length = 364 Score = 77.8 bits (190), Expect = 8e-13 Identities = 37/75 (49%), Positives = 49/75 (65%) Frame = +1 Query: 1 AELGELLHNKAGSYMVNGDQTNEFDCFKEMDGAKESLLWWDNSFDAKSTPSSSWDSASVL 180 AEL + L+NK ++ +Q E +DG+K+SL WW N FD KS S SWDS SV+ Sbjct: 295 AELDDFLNNKMVGFLPQEEQMTE------IDGSKDSLAWWSNDFDTKSASSHSWDSTSVI 348 Query: 181 QQEGLFQECVLGYDL 225 Q EG+FQ+ VLGY+L Sbjct: 349 QSEGMFQDYVLGYNL 363