BLASTX nr result

ID: Coptis21_contig00028620 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00028620
         (307 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002324486.1| predicted protein [Populus trichocarpa] gi|2...    95   7e-18
ref|XP_002526213.1| r2r3-myb transcription factor, putative [Ric...    91   1e-16
gb|AEF14025.1| MYB5 [Gossypium barbadense]                             78   6e-13
emb|CBI17787.3| unnamed protein product [Vitis vinifera]               78   8e-13
ref|XP_002270766.1| PREDICTED: uncharacterized protein LOC100256...    78   8e-13

>ref|XP_002324486.1| predicted protein [Populus trichocarpa] gi|222865920|gb|EEF03051.1|
           predicted protein [Populus trichocarpa]
          Length = 366

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 39/75 (52%), Positives = 54/75 (72%)
 Frame = +1

Query: 1   AELGELLHNKAGSYMVNGDQTNEFDCFKEMDGAKESLLWWDNSFDAKSTPSSSWDSASVL 180
           +EL   L+NK   +   GDQ  EFDCFKEM+G+++++ WW N F+ KS  S+SWDS SVL
Sbjct: 292 SELENFLNNKTSGFTAQGDQIGEFDCFKEMNGSRDNMNWWSNDFETKSASSNSWDSTSVL 351

Query: 181 QQEGLFQECVLGYDL 225
           Q EG+FQ+  LGY++
Sbjct: 352 QSEGMFQDYELGYNM 366


>ref|XP_002526213.1| r2r3-myb transcription factor, putative [Ricinus communis]
           gi|223534452|gb|EEF36154.1| r2r3-myb transcription
           factor, putative [Ricinus communis]
          Length = 417

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 41/76 (53%), Positives = 54/76 (71%), Gaps = 1/76 (1%)
 Frame = +1

Query: 1   AELGELLHNKAGSYMVNGDQTNEFDCFKEMDGAKESLLWWDNSFDAKSTPSSSWDSASVL 180
           AEL   L NK   ++   DQ  EFDCF+EM+G+K+SL+WW N F+ KS  S+SWDS SVL
Sbjct: 342 AELENFLSNKTSGFVSQEDQITEFDCFREMNGSKDSLVWWSNDFETKSASSNSWDSTSVL 401

Query: 181 QQEGLFQEC-VLGYDL 225
           Q EG+FQ+   LGY++
Sbjct: 402 QSEGMFQDYHELGYNM 417


>gb|AEF14025.1| MYB5 [Gossypium barbadense]
          Length = 359

 Score = 78.2 bits (191), Expect = 6e-13
 Identities = 35/77 (45%), Positives = 50/77 (64%), Gaps = 3/77 (3%)
 Frame = +1

Query: 4   ELGELLHNKA---GSYMVNGDQTNEFDCFKEMDGAKESLLWWDNSFDAKSTPSSSWDSAS 174
           EL   L++K+   G Y       N+ DCF++++G+K+S +WW   FDAKS  S+SWDS S
Sbjct: 283 ELDVFLNHKSSTTGGYPQEDQTVNQLDCFRDINGSKDSSIWWPTDFDAKSASSNSWDSTS 342

Query: 175 VLQQEGLFQECVLGYDL 225
           VLQ  G+FQ+  LGY +
Sbjct: 343 VLQSNGMFQDFELGYPM 359


>emb|CBI17787.3| unnamed protein product [Vitis vinifera]
          Length = 365

 Score = 77.8 bits (190), Expect = 8e-13
 Identities = 37/75 (49%), Positives = 49/75 (65%)
 Frame = +1

Query: 1   AELGELLHNKAGSYMVNGDQTNEFDCFKEMDGAKESLLWWDNSFDAKSTPSSSWDSASVL 180
           AEL + L+NK   ++   +Q  E      +DG+K+SL WW N FD KS  S SWDS SV+
Sbjct: 296 AELDDFLNNKMVGFLPQEEQMTE------IDGSKDSLAWWSNDFDTKSASSHSWDSTSVI 349

Query: 181 QQEGLFQECVLGYDL 225
           Q EG+FQ+ VLGY+L
Sbjct: 350 QSEGMFQDYVLGYNL 364


>ref|XP_002270766.1| PREDICTED: uncharacterized protein LOC100256441 [Vitis vinifera]
          Length = 364

 Score = 77.8 bits (190), Expect = 8e-13
 Identities = 37/75 (49%), Positives = 49/75 (65%)
 Frame = +1

Query: 1   AELGELLHNKAGSYMVNGDQTNEFDCFKEMDGAKESLLWWDNSFDAKSTPSSSWDSASVL 180
           AEL + L+NK   ++   +Q  E      +DG+K+SL WW N FD KS  S SWDS SV+
Sbjct: 295 AELDDFLNNKMVGFLPQEEQMTE------IDGSKDSLAWWSNDFDTKSASSHSWDSTSVI 348

Query: 181 QQEGLFQECVLGYDL 225
           Q EG+FQ+ VLGY+L
Sbjct: 349 QSEGMFQDYVLGYNL 363