BLASTX nr result

ID: Coptis21_contig00028618 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00028618
         (420 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271966.2| PREDICTED: probable cysteine synthase, chlor...   235   3e-60
emb|CAN73180.1| hypothetical protein VITISV_043178 [Vitis vinifera]   235   3e-60
ref|XP_003554061.1| PREDICTED: probable cysteine synthase, chlor...   234   7e-60
ref|XP_003554060.1| PREDICTED: probable cysteine synthase, chlor...   234   7e-60
ref|XP_003521872.1| PREDICTED: probable cysteine synthase, chlor...   233   1e-59

>ref|XP_002271966.2| PREDICTED: probable cysteine synthase, chloroplastic-like [Vitis
           vinifera] gi|296085861|emb|CBI31185.3| unnamed protein
           product [Vitis vinifera]
          Length = 390

 Score =  235 bits (599), Expect = 3e-60
 Identities = 116/139 (83%), Positives = 127/139 (91%)
 Frame = +2

Query: 2   KVVGGCVANVAAKLESMEPCRSVKDRIGLSMIADAEENDGISPGKTILVEPTTGNTGIGI 181
           KV  GCVAN+AAKLESMEPCRSVKDRIG SMI+DAEE   ISPG++ILVEPT+GNTG+GI
Sbjct: 102 KVTQGCVANIAAKLESMEPCRSVKDRIGYSMISDAEETGAISPGRSILVEPTSGNTGLGI 161

Query: 182 AFVAATKGYKLIVTMPASINLERRLLLRAFGAEIILTDPAKGMKGAVDKAEEIAHRTPNA 361
           AFVAATKGYKLIVTMPASI++ERR+LLRAFGAEI+LTDP KG+KGAVDKAEEI    PNA
Sbjct: 162 AFVAATKGYKLIVTMPASIDIERRILLRAFGAEIVLTDPMKGIKGAVDKAEEIVQSMPNA 221

Query: 362 YMFQQFDNPANAKIHFETT 418
           YMFQQFDN ANAKIHFETT
Sbjct: 222 YMFQQFDNMANAKIHFETT 240


>emb|CAN73180.1| hypothetical protein VITISV_043178 [Vitis vinifera]
          Length = 361

 Score =  235 bits (599), Expect = 3e-60
 Identities = 116/139 (83%), Positives = 127/139 (91%)
 Frame = +2

Query: 2   KVVGGCVANVAAKLESMEPCRSVKDRIGLSMIADAEENDGISPGKTILVEPTTGNTGIGI 181
           KV  GCVAN+AAKLESMEPCRSVKDRIG SMI+DAEE   ISPG++ILVEPT+GNTG+GI
Sbjct: 6   KVTQGCVANIAAKLESMEPCRSVKDRIGYSMISDAEETGAISPGRSILVEPTSGNTGLGI 65

Query: 182 AFVAATKGYKLIVTMPASINLERRLLLRAFGAEIILTDPAKGMKGAVDKAEEIAHRTPNA 361
           AFVAATKGYKLIVTMPASI++ERR+LLRAFGAEI+LTDP KG+KGAVDKAEEI    PNA
Sbjct: 66  AFVAATKGYKLIVTMPASIDIERRILLRAFGAEIVLTDPMKGIKGAVDKAEEIVQSMPNA 125

Query: 362 YMFQQFDNPANAKIHFETT 418
           YMFQQFDN ANAKIHFETT
Sbjct: 126 YMFQQFDNMANAKIHFETT 144


>ref|XP_003554061.1| PREDICTED: probable cysteine synthase, chloroplastic-like isoform 2
           [Glycine max]
          Length = 371

 Score =  234 bits (596), Expect = 7e-60
 Identities = 115/139 (82%), Positives = 125/139 (89%)
 Frame = +2

Query: 2   KVVGGCVANVAAKLESMEPCRSVKDRIGLSMIADAEENDGISPGKTILVEPTTGNTGIGI 181
           KV  GCVAN+AAKLESMEPCRSVKDRIG SM++DAEE   ISPGKTILVEPTTGNTG+GI
Sbjct: 86  KVTEGCVANIAAKLESMEPCRSVKDRIGYSMLSDAEEIGAISPGKTILVEPTTGNTGLGI 145

Query: 182 AFVAATKGYKLIVTMPASINLERRLLLRAFGAEIILTDPAKGMKGAVDKAEEIAHRTPNA 361
           AFVAATKGYKLIVTMPASIN+ERR+LLRAFGAE++LTD  KG+KGAVDKAEEI   TPNA
Sbjct: 146 AFVAATKGYKLIVTMPASINVERRILLRAFGAEVVLTDAEKGLKGAVDKAEEIVRNTPNA 205

Query: 362 YMFQQFDNPANAKIHFETT 418
           YMF+QFDN  N KIHFETT
Sbjct: 206 YMFRQFDNMTNTKIHFETT 224


>ref|XP_003554060.1| PREDICTED: probable cysteine synthase, chloroplastic-like isoform 1
           [Glycine max]
          Length = 381

 Score =  234 bits (596), Expect = 7e-60
 Identities = 115/139 (82%), Positives = 125/139 (89%)
 Frame = +2

Query: 2   KVVGGCVANVAAKLESMEPCRSVKDRIGLSMIADAEENDGISPGKTILVEPTTGNTGIGI 181
           KV  GCVAN+AAKLESMEPCRSVKDRIG SM++DAEE   ISPGKTILVEPTTGNTG+GI
Sbjct: 86  KVTEGCVANIAAKLESMEPCRSVKDRIGYSMLSDAEEIGAISPGKTILVEPTTGNTGLGI 145

Query: 182 AFVAATKGYKLIVTMPASINLERRLLLRAFGAEIILTDPAKGMKGAVDKAEEIAHRTPNA 361
           AFVAATKGYKLIVTMPASIN+ERR+LLRAFGAE++LTD  KG+KGAVDKAEEI   TPNA
Sbjct: 146 AFVAATKGYKLIVTMPASINVERRILLRAFGAEVVLTDAEKGLKGAVDKAEEIVRNTPNA 205

Query: 362 YMFQQFDNPANAKIHFETT 418
           YMF+QFDN  N KIHFETT
Sbjct: 206 YMFRQFDNMTNTKIHFETT 224


>ref|XP_003521872.1| PREDICTED: probable cysteine synthase, chloroplastic-like [Glycine
           max]
          Length = 372

 Score =  233 bits (594), Expect = 1e-59
 Identities = 115/139 (82%), Positives = 125/139 (89%)
 Frame = +2

Query: 2   KVVGGCVANVAAKLESMEPCRSVKDRIGLSMIADAEENDGISPGKTILVEPTTGNTGIGI 181
           KV  GCVAN+AAKLESMEPCRSVKDRIG SM++DAEE   ISPGKTILVEPTTGNTG+GI
Sbjct: 87  KVTEGCVANIAAKLESMEPCRSVKDRIGYSMLSDAEEIGAISPGKTILVEPTTGNTGLGI 146

Query: 182 AFVAATKGYKLIVTMPASINLERRLLLRAFGAEIILTDPAKGMKGAVDKAEEIAHRTPNA 361
           AFVAATKGYKLIVTMPAS+N+ERR+LLRAFGAE+ILTD  KG+KGAVDKAEEI H T NA
Sbjct: 147 AFVAATKGYKLIVTMPASVNVERRILLRAFGAEVILTDAEKGLKGAVDKAEEIVHSTNNA 206

Query: 362 YMFQQFDNPANAKIHFETT 418
           YMF+QFDN  N KIHFETT
Sbjct: 207 YMFRQFDNMTNTKIHFETT 225


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