BLASTX nr result

ID: Coptis21_contig00028603 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00028603
         (502 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002525015.1| conserved hypothetical protein [Ricinus comm...    91   1e-16
ref|XP_002323438.1| predicted protein [Populus trichocarpa] gi|2...    86   2e-15
ref|XP_002277319.1| PREDICTED: uncharacterized protein LOC100243...    86   2e-15
ref|XP_002309438.1| predicted protein [Populus trichocarpa] gi|2...    85   7e-15
ref|XP_003542479.1| PREDICTED: uncharacterized protein LOC100816...    81   1e-13

>ref|XP_002525015.1| conserved hypothetical protein [Ricinus communis]
           gi|223535677|gb|EEF37342.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 147

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 49/91 (53%), Positives = 53/91 (58%)
 Frame = +3

Query: 51  PRVVDSISCRQMYLRSYTFSRKETVPEKTKKCFXXXXXXXXXXXXXXXXXXXXXXXXXXX 230
           PRVVDSISCRQMYLRSYTFSRKE+VPE+TKKC                            
Sbjct: 55  PRVVDSISCRQMYLRSYTFSRKESVPERTKKCIGRVKEKVANHGKKIKEKGGRRRNKCLV 114

Query: 231 XXXVKEISVAAFYSILNRLLSCSASVDVVDH 323
              VKE S  A + I +RLLSC ASVDVVDH
Sbjct: 115 FRKVKEFSCNALFRIFHRLLSCGASVDVVDH 145


>ref|XP_002323438.1| predicted protein [Populus trichocarpa] gi|222868068|gb|EEF05199.1|
           predicted protein [Populus trichocarpa]
          Length = 143

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 50/107 (46%), Positives = 62/107 (57%), Gaps = 1/107 (0%)
 Frame = +3

Query: 3   VHKVTGHKSNTNSSTSPRVVDSISCRQMYLRSYTFSRKETVPEKTKKCF-XXXXXXXXXX 179
           V +V GH  + +    PRVVDSISCRQ+YLRSYTFSRKE++PEKTKKCF           
Sbjct: 41  VRRVAGHGLHGH----PRVVDSISCRQLYLRSYTFSRKESMPEKTKKCFGRVKEKVANHG 96

Query: 180 XXXXXXXXXXXXXXXXXXXXVKEISVAAFYSILNRLLSCSASVDVVD 320
                                KE+S +A + I +RLLSC+A+VDVVD
Sbjct: 97  KKRKDQIKGGRKRKCLVFRKAKEVSCSALFRIFHRLLSCTATVDVVD 143


>ref|XP_002277319.1| PREDICTED: uncharacterized protein LOC100243200 [Vitis vinifera]
           gi|147771778|emb|CAN66779.1| hypothetical protein
           VITISV_039550 [Vitis vinifera]
          Length = 141

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 49/97 (50%), Positives = 57/97 (58%)
 Frame = +3

Query: 30  NTNSSTSPRVVDSISCRQMYLRSYTFSRKETVPEKTKKCFXXXXXXXXXXXXXXXXXXXX 209
           + +S+  PRVVDSISCRQMYLRSYTFS+KETVPEKT KCF                    
Sbjct: 37  SVSSNRHPRVVDSISCRQMYLRSYTFSKKETVPEKTIKCF-GRVKERVAHGRRRNKGEEL 95

Query: 210 XXXXXXXXXXVKEISVAAFYSILNRLLSCSASVDVVD 320
                     VKEIS +A Y+I  RLL C+ +VDVVD
Sbjct: 96  HGKRFVVVRKVKEISCSALYAIFRRLLYCTTTVDVVD 132


>ref|XP_002309438.1| predicted protein [Populus trichocarpa] gi|222855414|gb|EEE92961.1|
           predicted protein [Populus trichocarpa]
          Length = 147

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 50/108 (46%), Positives = 62/108 (57%), Gaps = 2/108 (1%)
 Frame = +3

Query: 3   VHKVTGHKSNTNSSTSPRVVDSISCRQMYLRSYTFSRKETVPEKTKKCF--XXXXXXXXX 176
           V +V GH  + +    PRVVDSISCRQMYLRSYTFSRKE++PEKTKKC            
Sbjct: 41  VRRVAGHGLHGH----PRVVDSISCRQMYLRSYTFSRKESMPEKTKKCLERVKEKVTSHG 96

Query: 177 XXXXXXXXXXXXXXXXXXXXXVKEISVAAFYSILNRLLSCSASVDVVD 320
                                VKEIS +A + + +RLLSC+A+VDVV+
Sbjct: 97  KKRKDHQVKGGRKGRCLVFREVKEISCSALFRVFHRLLSCTATVDVVE 144


>ref|XP_003542479.1| PREDICTED: uncharacterized protein LOC100816302 [Glycine max]
          Length = 140

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 46/89 (51%), Positives = 52/89 (58%)
 Frame = +3

Query: 51  PRVVDSISCRQMYLRSYTFSRKETVPEKTKKCFXXXXXXXXXXXXXXXXXXXXXXXXXXX 230
           PRVVDSISCRQMYLRSY FSRKE+VPEKT+KCF                           
Sbjct: 49  PRVVDSISCRQMYLRSYKFSRKESVPEKTQKCF-GRVKERVKKQGSSQHNHGVGRRKCLV 107

Query: 231 XXXVKEISVAAFYSILNRLLSCSASVDVV 317
              ++EIS AA + I +R LSC ASVDVV
Sbjct: 108 WRKMREISCAALFRIFHRFLSCGASVDVV 136


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