BLASTX nr result

ID: Coptis21_contig00028591 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00028591
         (256 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002326500.1| predicted protein [Populus trichocarpa] gi|2...    68   9e-10
ref|XP_003538768.1| PREDICTED: uncharacterized protein LOC100784...    59   3e-08
ref|XP_004148518.1| PREDICTED: uncharacterized protein LOC101208...    57   2e-07
ref|XP_004163763.1| PREDICTED: uncharacterized LOC101208017, par...    57   2e-07
ref|XP_003516643.1| PREDICTED: uncharacterized protein LOC100779...    55   3e-07

>ref|XP_002326500.1| predicted protein [Populus trichocarpa] gi|222833822|gb|EEE72299.1|
           predicted protein [Populus trichocarpa]
          Length = 382

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 32/57 (56%), Positives = 42/57 (73%), Gaps = 3/57 (5%)
 Frame = -3

Query: 188 YMYTKQKAMETIKSSLETQTDLNGIKELKCPDWLVEHYKPLWCYI---ISDNGSMIM 27
           Y+YTK KAMETI   L+T+T+ NG KE KCPD LVEHYKP  C++   IS++  +I+
Sbjct: 176 YVYTKMKAMETISEELQTRTNPNGKKEFKCPDLLVEHYKPFTCHLRQWISEHALVIV 232


>ref|XP_003538768.1| PREDICTED: uncharacterized protein LOC100784375 [Glycine max]
          Length = 381

 Score = 58.9 bits (141), Expect(2) = 3e-08
 Identities = 29/55 (52%), Positives = 37/55 (67%), Gaps = 1/55 (1%)
 Frame = -3

Query: 215 GNVWIRQECYMYTKQKAMETIKSSLETQTDLN-GIKELKCPDWLVEHYKPLWCYI 54
           GNV +    Y YTKQ+A+ET+   LET+ + + G+KE KCPD L EHYKP  C I
Sbjct: 164 GNVKVDNALYNYTKQRAVETMGKLLETRLNSSHGMKEFKCPDQLAEHYKPYTCCI 218



 Score = 23.9 bits (50), Expect(2) = 3e-08
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = -2

Query: 51  IRQWIYDHASILVPVSA 1
           IRQWI  H  +++P+ A
Sbjct: 218 IRQWISQHILVVLPICA 234


>ref|XP_004148518.1| PREDICTED: uncharacterized protein LOC101208017 [Cucumis sativus]
          Length = 404

 Score = 56.6 bits (135), Expect(2) = 2e-07
 Identities = 30/66 (45%), Positives = 37/66 (56%)
 Frame = -3

Query: 251 WDSLGSR*VEFEGNVWIRQECYMYTKQKAMETIKSSLETQTDLNGIKELKCPDWLVEHYK 72
           WD L  +  E   ++       MY K KA+ETI   L+T+ +  GIKELKCPD L E YK
Sbjct: 173 WDDLDGK--ELVESIGSDNTTLMYAKSKALETIGGLLQTRQNSLGIKELKCPDLLAESYK 230

Query: 71  PLWCYI 54
           P  C I
Sbjct: 231 PFTCRI 236



 Score = 23.1 bits (48), Expect(2) = 2e-07
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = -2

Query: 51  IRQWIYDHASILVPV 7
           IR W+  HA +++PV
Sbjct: 236 IRHWVLQHAFVVLPV 250


>ref|XP_004163763.1| PREDICTED: uncharacterized LOC101208017, partial [Cucumis sativus]
          Length = 280

 Score = 56.6 bits (135), Expect(2) = 2e-07
 Identities = 30/66 (45%), Positives = 37/66 (56%)
 Frame = -3

Query: 251 WDSLGSR*VEFEGNVWIRQECYMYTKQKAMETIKSSLETQTDLNGIKELKCPDWLVEHYK 72
           WD L  +  E   ++       MY K KA+ETI   L+T+ +  GIKELKCPD L E YK
Sbjct: 173 WDDLDGK--ELVESIGSDNTTLMYAKSKALETIGGLLQTRQNSLGIKELKCPDLLAESYK 230

Query: 71  PLWCYI 54
           P  C I
Sbjct: 231 PFTCRI 236



 Score = 23.1 bits (48), Expect(2) = 2e-07
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = -2

Query: 51  IRQWIYDHASILVPV 7
           IR W+  HA +++PV
Sbjct: 236 IRHWVLQHAFVVLPV 250


>ref|XP_003516643.1| PREDICTED: uncharacterized protein LOC100779650 [Glycine max]
          Length = 377

 Score = 55.5 bits (132), Expect(2) = 3e-07
 Identities = 28/55 (50%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
 Frame = -3

Query: 215 GNVWIRQECYMYTKQKAMETIKSSLETQTDLN-GIKELKCPDWLVEHYKPLWCYI 54
           GNV +    Y YTKQKA ET+   L+T+ + + G+KE KCPD L EHYK   C I
Sbjct: 159 GNVKVDNALYKYTKQKAFETMGKLLDTRLNSSHGMKEFKCPDQLAEHYKSYACCI 213



 Score = 23.9 bits (50), Expect(2) = 3e-07
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = -2

Query: 51  IRQWIYDHASILVPVSA 1
           IRQWI  H  +++P+ A
Sbjct: 213 IRQWISQHILVVLPICA 229


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