BLASTX nr result

ID: Coptis21_contig00028580 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00028580
         (261 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAF98469.1| cytochrome P450 [Coptis japonica var. dissecta]        93   3e-17
ref|XP_002327096.1| cytochrome P450 [Populus trichocarpa] gi|222...    72   4e-11
ref|XP_002284031.1| PREDICTED: cytochrome P450 82C4 [Vitis vinif...    69   4e-10
ref|XP_002869302.1| CYP82C4 [Arabidopsis lyrata subsp. lyrata] g...    67   2e-09
ref|NP_194922.1| cytochrome P450, family 82, subfamily C, polype...    66   3e-09

>dbj|BAF98469.1| cytochrome P450 [Coptis japonica var. dissecta]
          Length = 511

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 43/55 (78%), Positives = 49/55 (89%)
 Frame = -2

Query: 260 LQVVPLVMARFLHVFEPKTQMDMPVDMTEFEGITNARATPLEVVLTPRLRPEFYG 96
           LQVVPLV+ARFLH F+ KT+MDMPVDMTE  G+TNA+ATPLEVV+TPRL PE YG
Sbjct: 456 LQVVPLVLARFLHEFDSKTEMDMPVDMTETAGLTNAKATPLEVVITPRLHPEIYG 510


>ref|XP_002327096.1| cytochrome P450 [Populus trichocarpa] gi|222835411|gb|EEE73846.1|
           cytochrome P450 [Populus trichocarpa]
          Length = 392

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 34/56 (60%), Positives = 42/56 (75%)
 Frame = -2

Query: 260 LQVVPLVMARFLHVFEPKTQMDMPVDMTEFEGITNARATPLEVVLTPRLRPEFYGF 93
           LQV+ L +AR LH FE  T MD PVD+TE  G+T  +ATPLEV+LTPRL P+ YG+
Sbjct: 337 LQVLHLTLARLLHSFELATPMDQPVDLTESSGLTIPKATPLEVILTPRLPPKLYGY 392


>ref|XP_002284031.1| PREDICTED: cytochrome P450 82C4 [Vitis vinifera]
           gi|302142392|emb|CBI19595.3| unnamed protein product
           [Vitis vinifera]
          Length = 527

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 33/56 (58%), Positives = 40/56 (71%)
 Frame = -2

Query: 260 LQVVPLVMARFLHVFEPKTQMDMPVDMTEFEGITNARATPLEVVLTPRLRPEFYGF 93
           LQV+ L +AR LH FE  T +D PVDMTE  G+T  +ATPLEV+LTPRL  + Y F
Sbjct: 472 LQVLHLTLARLLHAFELSTPVDQPVDMTESSGLTIPKATPLEVLLTPRLNSKLYAF 527


>ref|XP_002869302.1| CYP82C4 [Arabidopsis lyrata subsp. lyrata]
           gi|297315138|gb|EFH45561.1| CYP82C4 [Arabidopsis lyrata
           subsp. lyrata]
          Length = 524

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 31/54 (57%), Positives = 42/54 (77%)
 Frame = -2

Query: 260 LQVVPLVMARFLHVFEPKTQMDMPVDMTEFEGITNARATPLEVVLTPRLRPEFY 99
           +QV+ L +ARFLH FE KT MDMPVDM+E  G+T  + TPLEV+++PRL+ E +
Sbjct: 470 MQVLHLGLARFLHSFEVKTVMDMPVDMSESPGLTIPKGTPLEVLISPRLKEELF 523


>ref|NP_194922.1| cytochrome P450, family 82, subfamily C, polypeptide 4 [Arabidopsis
           thaliana] gi|75314129|sp|Q9SZ46.1|C82C4_ARATH RecName:
           Full=Cytochrome P450 82C4 gi|2827641|emb|CAA16595.1|
           Cytochrome P450-like protein [Arabidopsis thaliana]
           gi|7270098|emb|CAB79912.1| Cytochrome P450-like protein
           [Arabidopsis thaliana] gi|332660581|gb|AEE85981.1|
           cytochrome P450, family 82, subfamily C, polypeptide 4
           [Arabidopsis thaliana]
          Length = 524

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 30/54 (55%), Positives = 43/54 (79%)
 Frame = -2

Query: 260 LQVVPLVMARFLHVFEPKTQMDMPVDMTEFEGITNARATPLEVVLTPRLRPEFY 99
           +QV+ L +ARFLH F+ KT MDMPVDM+E  G+T  +ATPLEV+++PR++ E +
Sbjct: 470 MQVLHLGLARFLHSFDVKTVMDMPVDMSENPGLTIPKATPLEVLISPRIKEELF 523


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