BLASTX nr result

ID: Coptis21_contig00028559 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00028559
         (614 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002310773.1| predicted protein [Populus trichocarpa] gi|2...   169   5e-40
ref|XP_002880522.1| hypothetical protein ARALYDRAFT_343930 [Arab...   165   7e-39
ref|XP_003631861.1| PREDICTED: uncharacterized protein LOC100853...   157   2e-36
ref|NP_850043.2| uncharacterized protein [Arabidopsis thaliana] ...   154   1e-35
ref|XP_004141949.1| PREDICTED: uncharacterized protein LOC101203...   151   8e-35

>ref|XP_002310773.1| predicted protein [Populus trichocarpa] gi|222853676|gb|EEE91223.1|
           predicted protein [Populus trichocarpa]
          Length = 175

 Score =  169 bits (427), Expect = 5e-40
 Identities = 87/160 (54%), Positives = 105/160 (65%), Gaps = 16/160 (10%)
 Frame = -2

Query: 529 STKIFTFCSLLMAFLFAYSASVQLNDPDWYLWFPLYTTASLVNLLRNTSTSRTVKQTAKL 350
           +T  F+ CSLLMA LF YSASVQLNDPDWY W PLY  A  VNL+    ++ T++Q AK+
Sbjct: 3   TTIAFSLCSLLMAALFGYSASVQLNDPDWYFWLPLYACACAVNLVNWAISNTTIRQIAKV 62

Query: 349 AFWLGTFLFLKVVIEDYVDELAGFWSLNLEERVVREKVGSGLVMISMLLHLEVSVVS--- 179
             W    LF+KVVIEDYV+  AGFWSL++ ERVVREK GSGLV+ISM+LHLE S      
Sbjct: 63  TLWFAALLFVKVVIEDYVNGTAGFWSLDVSERVVREKTGSGLVLISMILHLEASSEPKHS 122

Query: 178 -------------EYGMVLLVAFSYGVPLVFFMFLKGEIR 98
                        EYGM  LV FS G+P VFF+   GE++
Sbjct: 123 KMPRKRREFPRSVEYGMASLVIFSLGLPFVFFVIHDGEMK 162


>ref|XP_002880522.1| hypothetical protein ARALYDRAFT_343930 [Arabidopsis lyrata subsp.
           lyrata] gi|297326361|gb|EFH56781.1| hypothetical protein
           ARALYDRAFT_343930 [Arabidopsis lyrata subsp. lyrata]
          Length = 152

 Score =  165 bits (417), Expect = 7e-39
 Identities = 86/152 (56%), Positives = 107/152 (70%), Gaps = 4/152 (2%)
 Frame = -2

Query: 538 MAKSTKIFTFCSLLMAFLFAYSASVQLNDPDWYLWFPLYTTASLVNLL---RNTSTSRTV 368
           MAK   +F  CSLLMAFLFAYSASVQLNDPDWY WFPLYT + ++NL+   R  S SR +
Sbjct: 1   MAKPRNLFRVCSLLMAFLFAYSASVQLNDPDWYFWFPLYTLSCVINLINCRRRISKSRRI 60

Query: 367 KQTAKLAFWLGTFLFLKVVIEDYVDELAGFWSLNLEERVVREKVGSGLVMISMLLHLEVS 188
           KQ    A  LG FL +KVV+ED + E  G  SL+L  RVVREK+GSGLV+ SM+L L+ S
Sbjct: 61  KQMIGTALSLGLFLLVKVVVEDVITEKVGVLSLDLTHRVVREKIGSGLVIASMVLQLQSS 120

Query: 187 VVS-EYGMVLLVAFSYGVPLVFFMFLKGEIRL 95
             + ++GMV +V F YG+P  FF   KGEI++
Sbjct: 121 SETIDFGMVAIVVFGYGLPFWFFTIEKGEIKI 152


>ref|XP_003631861.1| PREDICTED: uncharacterized protein LOC100853825 [Vitis vinifera]
           gi|297735228|emb|CBI17590.3| unnamed protein product
           [Vitis vinifera]
          Length = 165

 Score =  157 bits (396), Expect = 2e-36
 Identities = 81/164 (49%), Positives = 109/164 (66%), Gaps = 17/164 (10%)
 Frame = -2

Query: 538 MAKSTKIFTFCSLLMAFLFAYSASVQLNDPDWYLWFPLYTTASLVNLLRNTS--TSRTVK 365
           MA  TK+F+ CSLLMA LFA+S+SVQ +DPDWY WFPLY +A  VNL+      + + ++
Sbjct: 1   MATPTKLFSLCSLLMASLFAWSSSVQFDDPDWYFWFPLYASACGVNLINGIGALSLKPIR 60

Query: 364 QTAKLAFWLGTFLFLKVVIEDYVDELAGFWSLNLEERVVREKVGSGLVMISMLLHLEVSV 185
           + AKLA WLG FLF+KV +E++V  +AGFWSL+L+E+VVREK GSG V+ SM L L+ + 
Sbjct: 61  KIAKLALWLGVFLFIKVAVEEFVYGIAGFWSLDLKEKVVREKFGSGFVVNSMYLQLQAAS 120

Query: 184 VS---------------EYGMVLLVAFSYGVPLVFFMFLKGEIR 98
           V                E GM +LV  SYG+   FF+  KGE++
Sbjct: 121 VQKDYVKRKEKKVPRYVECGMAILVVASYGMSFGFFVLQKGEMK 164


>ref|NP_850043.2| uncharacterized protein [Arabidopsis thaliana]
           gi|29725826|gb|AAO89207.1| hypothetical protein
           [Arabidopsis thaliana] gi|50058903|gb|AAT69196.1|
           hypothetical protein At2g23755 [Arabidopsis thaliana]
           gi|330252391|gb|AEC07485.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 150

 Score =  154 bits (389), Expect = 1e-35
 Identities = 84/153 (54%), Positives = 103/153 (67%), Gaps = 5/153 (3%)
 Frame = -2

Query: 538 MAKSTKIFTFCSLLMAFLFAYSASVQLNDPDWYLWFPLYTTASLVNLLRNTSTSRTVK-Q 362
           MAK   +F  CSLLMAFLFAYSASVQLNDPDWY WFPLYT A +VNL+   +  R +K  
Sbjct: 1   MAKPRNLFRVCSLLMAFLFAYSASVQLNDPDWYFWFPLYTLACVVNLI---NYRRRIKLM 57

Query: 361 TAKLAFWLGTFLFLKVVIEDYVDELAGFWSLNLEERVVREKVGSGLVMISMLLHLEVSVV 182
             + A  LG FL +KV+ ED + E  G  SL+L  RVVREK+GSGLV+ SM+L L+ S  
Sbjct: 58  MMRTALSLGVFLLVKVIAEDVITEKVGVLSLDLTHRVVREKIGSGLVIASMVLQLQASSS 117

Query: 181 S----EYGMVLLVAFSYGVPLVFFMFLKGEIRL 95
           S    ++GMV  V F YG+P  FF   KGEI++
Sbjct: 118 SSKTIDFGMVATVIFGYGLPFWFFTIEKGEIKI 150


>ref|XP_004141949.1| PREDICTED: uncharacterized protein LOC101203807 [Cucumis sativus]
           gi|449497709|ref|XP_004160489.1| PREDICTED:
           uncharacterized LOC101203807 [Cucumis sativus]
          Length = 168

 Score =  151 bits (382), Expect = 8e-35
 Identities = 80/167 (47%), Positives = 106/167 (63%), Gaps = 20/167 (11%)
 Frame = -2

Query: 538 MAKSTKIFTFCSLLMAFLFAYSASVQLNDPDWYLWFPLYTTASLVNLLRNTSTSRTVKQT 359
           MA  +K+++ CS+LM FLFAYS +VQ NDPDWYLW PLY  A  VNLL+   +   +   
Sbjct: 1   MATPSKLYSSCSVLMGFLFAYSTAVQFNDPDWYLWVPLYGCACAVNLLKWNVSLEAMNNV 60

Query: 358 AKLAFWLGTFLFLKVVIEDYVDELAGFWSLNLEERVVREKVGSGLVMISMLLHLEVSVVS 179
           AK A  +G  L++KVV EDY++ +AGF SL+L ERVVREK GSGLV+ SM+LHL  +  S
Sbjct: 61  AKAAMGVGICLWVKVVAEDYMNGIAGFLSLDLSERVVREKTGSGLVVCSMILHLIAASSS 120

Query: 178 E--------------------YGMVLLVAFSYGVPLVFFMFLKGEIR 98
                                YG+  LVAFSYG+P+ FF+  KG+++
Sbjct: 121 SPKLRRTSKSKSKRVFPRHLTYGIACLVAFSYGLPIFFFLVKKGKMK 167


Top