BLASTX nr result

ID: Coptis21_contig00028541 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00028541
         (735 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004137033.1| PREDICTED: leucine-rich repeat extensin-like...   256   3e-66
ref|XP_004170132.1| PREDICTED: LOW QUALITY PROTEIN: leucine-rich...   254   1e-65
ref|XP_003526272.1| PREDICTED: pollen-specific leucine-rich repe...   248   7e-64
ref|XP_002517887.1| serine-threonine protein kinase, plant-type,...   248   7e-64
ref|XP_004151743.1| PREDICTED: pollen-specific leucine-rich repe...   243   4e-62

>ref|XP_004137033.1| PREDICTED: leucine-rich repeat extensin-like protein 4-like
           [Cucumis sativus]
          Length = 401

 Score =  256 bits (654), Expect = 3e-66
 Identities = 131/205 (63%), Positives = 150/205 (73%), Gaps = 2/205 (0%)
 Frame = +2

Query: 122 LVIFLLHFTCSFHRLLAKSKDNNSTTLEHRHFDPNA--RLHQAYVALQAWKLVIYSDPSN 295
           L + LL  +  F  L AK  D++     HR   PN+  RLHQA++ALQAWK VIYSDP N
Sbjct: 9   LFLLLLQSSFLFKSLTAKHHDDHH---HHRVRSPNSNPRLHQAFLALQAWKRVIYSDPKN 65

Query: 296 RTSDWVGPSVCDYTGVYCAPSVDDPHIQVVAGIDLNHADIAGFLPDELGLLSDLALFHVN 475
            T++WVGPSVC+Y GVYCAPS+DDP IQVVAGIDLNH DIAGFLP ELGLL+DLAL H+N
Sbjct: 66  HTTNWVGPSVCNYFGVYCAPSLDDPKIQVVAGIDLNHGDIAGFLPYELGLLADLALLHLN 125

Query: 476 SNRFCGIXXXXXXXXXXXXXXXXSNNRFVGRFPMVVLDLPSLKYLDLRYNEFEGPLPSEL 655
           SNRFCGI                SNNRFVG FP VVL LP LKYLDLR+NEFEG +PSEL
Sbjct: 126 SNRFCGILPQSLANLSLLFELDLSNNRFVGPFPSVVLHLPKLKYLDLRFNEFEGSIPSEL 185

Query: 656 FAKDLDAIFVNNNRLTSVIPSNISG 730
           F K LDAIF+N+NR T++IP NI G
Sbjct: 186 FNKTLDAIFINSNRFTNIIPRNIGG 210


>ref|XP_004170132.1| PREDICTED: LOW QUALITY PROTEIN: leucine-rich repeat extensin-like
           protein 4-like [Cucumis sativus]
          Length = 401

 Score =  254 bits (649), Expect = 1e-65
 Identities = 130/205 (63%), Positives = 149/205 (72%), Gaps = 2/205 (0%)
 Frame = +2

Query: 122 LVIFLLHFTCSFHRLLAKSKDNNSTTLEHRHFDPNA--RLHQAYVALQAWKLVIYSDPSN 295
           L + LL  +  F  L AK  D++     HR   PN+  RLHQA++ALQAWK VIYSDP N
Sbjct: 9   LFLLLLQSSFLFKSLTAKHHDDHH---HHRVRSPNSNPRLHQAFLALQAWKRVIYSDPKN 65

Query: 296 RTSDWVGPSVCDYTGVYCAPSVDDPHIQVVAGIDLNHADIAGFLPDELGLLSDLALFHVN 475
            T++W GPSVC+Y GVYCAPS+DDP IQVVAGIDLNH DIAGFLP ELGLL+DLAL H+N
Sbjct: 66  HTTNWXGPSVCNYFGVYCAPSLDDPKIQVVAGIDLNHGDIAGFLPYELGLLADLALLHLN 125

Query: 476 SNRFCGIXXXXXXXXXXXXXXXXSNNRFVGRFPMVVLDLPSLKYLDLRYNEFEGPLPSEL 655
           SNRFCGI                SNNRFVG FP VVL LP LKYLDLR+NEFEG +PSEL
Sbjct: 126 SNRFCGILPQSLANLSLLFELDLSNNRFVGPFPSVVLHLPKLKYLDLRFNEFEGSIPSEL 185

Query: 656 FAKDLDAIFVNNNRLTSVIPSNISG 730
           F K LDAIF+N+NR T++IP NI G
Sbjct: 186 FNKTLDAIFINSNRFTNIIPRNIGG 210


>ref|XP_003526272.1| PREDICTED: pollen-specific leucine-rich repeat extensin-like
           protein 3-like [Glycine max]
          Length = 419

 Score =  248 bits (634), Expect = 7e-64
 Identities = 127/220 (57%), Positives = 156/220 (70%), Gaps = 8/220 (3%)
 Frame = +2

Query: 89  MHQSSSSFS-TGLVIFLL--HFTCSFHRLLAKSKDNNSTTLEHRHFDP-----NARLHQA 244
           M  +S+S+S T  V+FL+  H +C  + L AK  + +S    H+H        N RLH A
Sbjct: 1   MASASASYSFTISVLFLIFVHLSCFINNLNAKHTNASSHNHHHKHQHTQNPSLNTRLHMA 60

Query: 245 YVALQAWKLVIYSDPSNRTSDWVGPSVCDYTGVYCAPSVDDPHIQVVAGIDLNHADIAGF 424
           ++ LQAWK VIYSDP+N TS+WVGPSVC+YTGV+CAPS+DDP + VVAGIDLN AD+AGF
Sbjct: 61  FLGLQAWKQVIYSDPNNFTSNWVGPSVCNYTGVFCAPSLDDPKVTVVAGIDLNFADLAGF 120

Query: 425 LPDELGLLSDLALFHVNSNRFCGIXXXXXXXXXXXXXXXXSNNRFVGRFPMVVLDLPSLK 604
           LP+E+GLLSDLA+ H+++NRFCGI                SNNRFVG FP+VV  LP LK
Sbjct: 121 LPNEIGLLSDLAVLHLSNNRFCGILPKSFTNLTLLYELDLSNNRFVGPFPLVVFSLPLLK 180

Query: 605 YLDLRYNEFEGPLPSELFAKDLDAIFVNNNRLTSVIPSNI 724
           YLDLRYNEFEGPLP +LF   +DAIFVNNNR  S IP N+
Sbjct: 181 YLDLRYNEFEGPLPPQLFNNTIDAIFVNNNRFISTIPPNL 220


>ref|XP_002517887.1| serine-threonine protein kinase, plant-type, putative [Ricinus
           communis] gi|223542869|gb|EEF44405.1| serine-threonine
           protein kinase, plant-type, putative [Ricinus communis]
          Length = 417

 Score =  248 bits (634), Expect = 7e-64
 Identities = 125/214 (58%), Positives = 153/214 (71%), Gaps = 6/214 (2%)
 Frame = +2

Query: 110 FSTGLVIFLLHFTCSFHRLLAKSKDNNSTTLEHRHFD------PNARLHQAYVALQAWKL 271
           F + L++ +L+ +C F+ + AK    +  +  HRH         N RL QAY+A +AWK 
Sbjct: 11  FRSLLILLILNLSCLFNNIAAK----HGNSAHHRHHSHIHSSTSNPRLQQAYIAFRAWKR 66

Query: 272 VIYSDPSNRTSDWVGPSVCDYTGVYCAPSVDDPHIQVVAGIDLNHADIAGFLPDELGLLS 451
           VIYSDP+N T++WVGP+VC+YTGVYCA + DDP+I+VVAG+DLN A++AGFLPDELGLL+
Sbjct: 67  VIYSDPNNFTTNWVGPNVCNYTGVYCASARDDPNIKVVAGLDLNFANLAGFLPDELGLLT 126

Query: 452 DLALFHVNSNRFCGIXXXXXXXXXXXXXXXXSNNRFVGRFPMVVLDLPSLKYLDLRYNEF 631
           DLAL H+NSNRFCGI                SNNRFVG FP VVL LP L YLD+RYNEF
Sbjct: 127 DLALIHLNSNRFCGIIPQTITNLTLLYELDLSNNRFVGGFPSVVLSLPMLNYLDIRYNEF 186

Query: 632 EGPLPSELFAKDLDAIFVNNNRLTSVIPSNISGS 733
           EGPLP ELF K LDAIFVNNN  +SVIP+  SGS
Sbjct: 187 EGPLPPELFQKKLDAIFVNNNMFSSVIPAFPSGS 220


>ref|XP_004151743.1| PREDICTED: pollen-specific leucine-rich repeat extensin-like
           protein 1-like, partial [Cucumis sativus]
          Length = 219

 Score =  243 bits (619), Expect = 4e-62
 Identities = 118/203 (58%), Positives = 139/203 (68%)
 Frame = +2

Query: 125 VIFLLHFTCSFHRLLAKSKDNNSTTLEHRHFDPNARLHQAYVALQAWKLVIYSDPSNRTS 304
           ++   H   S H++      N ST        PN RL +AY ALQAWKL +YSDP N T+
Sbjct: 11  IVLFHHSIISIHKITCNHVTNGSTF-------PNERLKKAYRALQAWKLAVYSDPKNMTA 63

Query: 305 DWVGPSVCDYTGVYCAPSVDDPHIQVVAGIDLNHADIAGFLPDELGLLSDLALFHVNSNR 484
           +WVG  VC YTGV+CAP++DDP I+VVAGIDLNH DIAG LP ELGLL+DLALFH+NSNR
Sbjct: 64  NWVGADVCSYTGVFCAPALDDPKIEVVAGIDLNHGDIAGHLPPELGLLTDLALFHINSNR 123

Query: 485 FCGIXXXXXXXXXXXXXXXXSNNRFVGRFPMVVLDLPSLKYLDLRYNEFEGPLPSELFAK 664
           FCGI                SNNRFVG FP+VVL+ PS KYLDLRYN+FEG +PS LF K
Sbjct: 124 FCGIIPSSFSNLVLMFEFDVSNNRFVGHFPLVVLEWPSAKYLDLRYNDFEGEIPSTLFTK 183

Query: 665 DLDAIFVNNNRLTSVIPSNISGS 733
           + DAIF+NNNR  S+IP  I  S
Sbjct: 184 EFDAIFLNNNRFNSLIPETIGNS 206


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