BLASTX nr result
ID: Coptis21_contig00028540
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00028540 (697 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002515310.1| conserved hypothetical protein [Ricinus comm... 123 3e-26 gb|ABK93302.1| unknown [Populus trichocarpa] 120 3e-25 gb|ABK94407.1| unknown [Populus trichocarpa] 117 3e-24 gb|AAX47176.1| expressed protein [Pisum sativum] 116 5e-24 ref|XP_003591442.1| hypothetical protein MTR_1g087500 [Medicago ... 114 2e-23 >ref|XP_002515310.1| conserved hypothetical protein [Ricinus communis] gi|223545790|gb|EEF47294.1| conserved hypothetical protein [Ricinus communis] Length = 269 Score = 123 bits (309), Expect = 3e-26 Identities = 71/135 (52%), Positives = 85/135 (62%), Gaps = 1/135 (0%) Frame = +2 Query: 2 SSSYTSLGCNLTSVACSQPRQRGSDSEGRFPSSPSDICHSADLRRAALLRSVQMRVQPPA 181 +SSY + GC ++SVACSQPRQRGSDSEGRFPSSPSDICHSADLRRAALLRSVQMR QPP Sbjct: 138 TSSYPAHGCTVSSVACSQPRQRGSDSEGRFPSSPSDICHSADLRRAALLRSVQMRTQPPG 197 Query: 182 LPSFELAFSXXXXXXXXXXXXXXXCSCGKSIVQECSCQNQQQIPNLFAEECSSIRDPDSE 361 SFEL F CS KS+V E Q EE SS+ + E Sbjct: 198 SSSFELPFGSGQEPASNIEAEERPCSYMKSLVDERDYQ---------IEEQSSMGSSEPE 248 Query: 362 VRE-KPYRLLDLSVK 403 + K R+L+++++ Sbjct: 249 FNDGKSCRVLNMNIE 263 >gb|ABK93302.1| unknown [Populus trichocarpa] Length = 271 Score = 120 bits (300), Expect = 3e-25 Identities = 73/135 (54%), Positives = 88/135 (65%), Gaps = 1/135 (0%) Frame = +2 Query: 2 SSSYTSLGCNLTSVACSQPRQRGSDSEGRFPSSPSDICHSADLRRAALLRSVQMRVQPPA 181 SSS++S GC++TS SQPRQRGSDSEGRFPSSPSDICHSADLRRAALLRSVQMR QP Sbjct: 143 SSSFSSHGCSVTS---SQPRQRGSDSEGRFPSSPSDICHSADLRRAALLRSVQMRTQPTG 199 Query: 182 LPSFELAFSXXXXXXXXXXXXXXXCSCGKSIVQECSCQNQQQIPNLFAEECSSIRDPDSE 361 SFEL FS CS KS+V+E ++ P EECSS+ + E Sbjct: 200 SSSFELPFSSGHEPGSNMEAEERPCSYMKSLVEE------REYP---LEECSSMSISEPE 250 Query: 362 V-REKPYRLLDLSVK 403 EK R+L++++K Sbjct: 251 FNEEKACRVLNMNIK 265 >gb|ABK94407.1| unknown [Populus trichocarpa] Length = 208 Score = 117 bits (292), Expect = 3e-24 Identities = 71/136 (52%), Positives = 82/136 (60%), Gaps = 2/136 (1%) Frame = +2 Query: 2 SSSYTSLGCNLTSVACSQPRQRGSDSEGRFPSSPSDICHSADLRRAALLRSVQMRVQPPA 181 SSS+ S GC++TS SQPRQRGSDSEGRFPSSPSDICHSADLRR ALLRSVQMR QP Sbjct: 77 SSSFLSHGCSVTSATYSQPRQRGSDSEGRFPSSPSDICHSADLRRTALLRSVQMRTQPLG 136 Query: 182 LPSFELAFSXXXXXXXXXXXXXXXCSCGKSIVQECSCQNQQQIPNLFAEECS--SIRDPD 355 SFEL F CS KS+V+E EECS SI +P Sbjct: 137 SSSFELPFDSGHEPGSNIEAEERPCSYMKSLVEE---------REYALEECSSMSISEPG 187 Query: 356 SEVREKPYRLLDLSVK 403 EK R+L++++K Sbjct: 188 FN-EEKACRVLNMNIK 202 >gb|AAX47176.1| expressed protein [Pisum sativum] Length = 265 Score = 116 bits (290), Expect = 5e-24 Identities = 69/140 (49%), Positives = 82/140 (58%), Gaps = 3/140 (2%) Frame = +2 Query: 2 SSSYTSLGCNLTSVACSQPRQRGSDSEGRFPSSPSDICHSADLRRAALLRSVQMRVQPPA 181 +S TS G +++V CSQPRQR SDS+GRFPSSPSDICHSADLRRAALLRSVQMR PP Sbjct: 132 TSLNTSHGFPVSAVTCSQPRQRSSDSDGRFPSSPSDICHSADLRRAALLRSVQMRTHPPG 191 Query: 182 LPSFELAFSXXXXXXXXXXXXXXXCSCGKSIVQECSCQNQQQIPNLFAEECSSIRDPDSE 361 S EL F CS KS+V E Q EECSSI P++E Sbjct: 192 SASLELPFGSGQEPAPNIDSEDRPCSYMKSLVDERDYQ---------IEECSSIGAPETE 242 Query: 362 V---REKPYRLLDLSVKEVE 412 KP R+L+++ K + Sbjct: 243 FNHDNNKPCRVLNMNPKAAD 262 >ref|XP_003591442.1| hypothetical protein MTR_1g087500 [Medicago truncatula] gi|355480490|gb|AES61693.1| hypothetical protein MTR_1g087500 [Medicago truncatula] Length = 264 Score = 114 bits (284), Expect = 2e-23 Identities = 67/134 (50%), Positives = 79/134 (58%), Gaps = 2/134 (1%) Frame = +2 Query: 17 SLGCNLTSVACSQPRQRGSDSEGRFPSSPSDICHSADLRRAALLRSVQMRVQPPALPSFE 196 S G ++++V CSQPRQR SDS+GRFPSSPSDICHSADLRRAALLRSVQMR PP S E Sbjct: 137 SHGFSVSAVTCSQPRQRSSDSDGRFPSSPSDICHSADLRRAALLRSVQMRTHPPGSASLE 196 Query: 197 LAFSXXXXXXXXXXXXXXXCSCGKSIVQECSCQNQQQIPNLFAEECSSIRDPDSEVR--E 370 L F CS KS+V E Q EECS I P+ E Sbjct: 197 LPFGSGQEPPPNIDPEERPCSYLKSMVDERDYQ---------IEECSPIGIPEPEFNHDN 247 Query: 371 KPYRLLDLSVKEVE 412 KP R+L+++ KE + Sbjct: 248 KPCRVLNMNPKEAD 261