BLASTX nr result

ID: Coptis21_contig00028540 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00028540
         (697 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002515310.1| conserved hypothetical protein [Ricinus comm...   123   3e-26
gb|ABK93302.1| unknown [Populus trichocarpa]                          120   3e-25
gb|ABK94407.1| unknown [Populus trichocarpa]                          117   3e-24
gb|AAX47176.1| expressed protein [Pisum sativum]                      116   5e-24
ref|XP_003591442.1| hypothetical protein MTR_1g087500 [Medicago ...   114   2e-23

>ref|XP_002515310.1| conserved hypothetical protein [Ricinus communis]
           gi|223545790|gb|EEF47294.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 269

 Score =  123 bits (309), Expect = 3e-26
 Identities = 71/135 (52%), Positives = 85/135 (62%), Gaps = 1/135 (0%)
 Frame = +2

Query: 2   SSSYTSLGCNLTSVACSQPRQRGSDSEGRFPSSPSDICHSADLRRAALLRSVQMRVQPPA 181
           +SSY + GC ++SVACSQPRQRGSDSEGRFPSSPSDICHSADLRRAALLRSVQMR QPP 
Sbjct: 138 TSSYPAHGCTVSSVACSQPRQRGSDSEGRFPSSPSDICHSADLRRAALLRSVQMRTQPPG 197

Query: 182 LPSFELAFSXXXXXXXXXXXXXXXCSCGKSIVQECSCQNQQQIPNLFAEECSSIRDPDSE 361
             SFEL F                CS  KS+V E   Q          EE SS+   + E
Sbjct: 198 SSSFELPFGSGQEPASNIEAEERPCSYMKSLVDERDYQ---------IEEQSSMGSSEPE 248

Query: 362 VRE-KPYRLLDLSVK 403
             + K  R+L+++++
Sbjct: 249 FNDGKSCRVLNMNIE 263


>gb|ABK93302.1| unknown [Populus trichocarpa]
          Length = 271

 Score =  120 bits (300), Expect = 3e-25
 Identities = 73/135 (54%), Positives = 88/135 (65%), Gaps = 1/135 (0%)
 Frame = +2

Query: 2   SSSYTSLGCNLTSVACSQPRQRGSDSEGRFPSSPSDICHSADLRRAALLRSVQMRVQPPA 181
           SSS++S GC++TS   SQPRQRGSDSEGRFPSSPSDICHSADLRRAALLRSVQMR QP  
Sbjct: 143 SSSFSSHGCSVTS---SQPRQRGSDSEGRFPSSPSDICHSADLRRAALLRSVQMRTQPTG 199

Query: 182 LPSFELAFSXXXXXXXXXXXXXXXCSCGKSIVQECSCQNQQQIPNLFAEECSSIRDPDSE 361
             SFEL FS               CS  KS+V+E      ++ P    EECSS+   + E
Sbjct: 200 SSSFELPFSSGHEPGSNMEAEERPCSYMKSLVEE------REYP---LEECSSMSISEPE 250

Query: 362 V-REKPYRLLDLSVK 403
              EK  R+L++++K
Sbjct: 251 FNEEKACRVLNMNIK 265


>gb|ABK94407.1| unknown [Populus trichocarpa]
          Length = 208

 Score =  117 bits (292), Expect = 3e-24
 Identities = 71/136 (52%), Positives = 82/136 (60%), Gaps = 2/136 (1%)
 Frame = +2

Query: 2   SSSYTSLGCNLTSVACSQPRQRGSDSEGRFPSSPSDICHSADLRRAALLRSVQMRVQPPA 181
           SSS+ S GC++TS   SQPRQRGSDSEGRFPSSPSDICHSADLRR ALLRSVQMR QP  
Sbjct: 77  SSSFLSHGCSVTSATYSQPRQRGSDSEGRFPSSPSDICHSADLRRTALLRSVQMRTQPLG 136

Query: 182 LPSFELAFSXXXXXXXXXXXXXXXCSCGKSIVQECSCQNQQQIPNLFAEECS--SIRDPD 355
             SFEL F                CS  KS+V+E              EECS  SI +P 
Sbjct: 137 SSSFELPFDSGHEPGSNIEAEERPCSYMKSLVEE---------REYALEECSSMSISEPG 187

Query: 356 SEVREKPYRLLDLSVK 403
               EK  R+L++++K
Sbjct: 188 FN-EEKACRVLNMNIK 202


>gb|AAX47176.1| expressed protein [Pisum sativum]
          Length = 265

 Score =  116 bits (290), Expect = 5e-24
 Identities = 69/140 (49%), Positives = 82/140 (58%), Gaps = 3/140 (2%)
 Frame = +2

Query: 2   SSSYTSLGCNLTSVACSQPRQRGSDSEGRFPSSPSDICHSADLRRAALLRSVQMRVQPPA 181
           +S  TS G  +++V CSQPRQR SDS+GRFPSSPSDICHSADLRRAALLRSVQMR  PP 
Sbjct: 132 TSLNTSHGFPVSAVTCSQPRQRSSDSDGRFPSSPSDICHSADLRRAALLRSVQMRTHPPG 191

Query: 182 LPSFELAFSXXXXXXXXXXXXXXXCSCGKSIVQECSCQNQQQIPNLFAEECSSIRDPDSE 361
             S EL F                CS  KS+V E   Q          EECSSI  P++E
Sbjct: 192 SASLELPFGSGQEPAPNIDSEDRPCSYMKSLVDERDYQ---------IEECSSIGAPETE 242

Query: 362 V---REKPYRLLDLSVKEVE 412
                 KP R+L+++ K  +
Sbjct: 243 FNHDNNKPCRVLNMNPKAAD 262


>ref|XP_003591442.1| hypothetical protein MTR_1g087500 [Medicago truncatula]
           gi|355480490|gb|AES61693.1| hypothetical protein
           MTR_1g087500 [Medicago truncatula]
          Length = 264

 Score =  114 bits (284), Expect = 2e-23
 Identities = 67/134 (50%), Positives = 79/134 (58%), Gaps = 2/134 (1%)
 Frame = +2

Query: 17  SLGCNLTSVACSQPRQRGSDSEGRFPSSPSDICHSADLRRAALLRSVQMRVQPPALPSFE 196
           S G ++++V CSQPRQR SDS+GRFPSSPSDICHSADLRRAALLRSVQMR  PP   S E
Sbjct: 137 SHGFSVSAVTCSQPRQRSSDSDGRFPSSPSDICHSADLRRAALLRSVQMRTHPPGSASLE 196

Query: 197 LAFSXXXXXXXXXXXXXXXCSCGKSIVQECSCQNQQQIPNLFAEECSSIRDPDSEVR--E 370
           L F                CS  KS+V E   Q          EECS I  P+ E     
Sbjct: 197 LPFGSGQEPPPNIDPEERPCSYLKSMVDERDYQ---------IEECSPIGIPEPEFNHDN 247

Query: 371 KPYRLLDLSVKEVE 412
           KP R+L+++ KE +
Sbjct: 248 KPCRVLNMNPKEAD 261


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