BLASTX nr result

ID: Coptis21_contig00028537 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00028537
         (574 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285141.1| PREDICTED: uncharacterized protein LOC100257...   127   2e-27
ref|XP_002510126.1| GAST1 protein precursor, putative [Ricinus c...   126   3e-27
ref|XP_002327192.1| predicted protein [Populus trichocarpa] gi|2...   126   3e-27
gb|AFT92001.1| gibberellin-regulated protein [Populus tomentosa]...   125   4e-27
gb|ABQ42622.1| snakin-1 [Solanum chacoense]                           125   7e-27

>ref|XP_002285141.1| PREDICTED: uncharacterized protein LOC100257455 [Vitis vinifera]
           gi|302142231|emb|CBI19434.3| unnamed protein product
           [Vitis vinifera]
          Length = 88

 Score =  127 bits (318), Expect = 2e-27
 Identities = 49/64 (76%), Positives = 57/64 (89%)
 Frame = +2

Query: 212 SGSGYCDKKCSYRCALAGVSDRCLKYCGICCMECKCVPSGTFGNKHECPCYRDKKSSKGH 391
           +GS +CD KC+ RC+ AG+ DRCLKYCGICC ECKCVPSGT+GNKHECPCY+DKK+SKG 
Sbjct: 25  AGSSFCDSKCAARCSKAGMKDRCLKYCGICCEECKCVPSGTYGNKHECPCYKDKKNSKGQ 84

Query: 392 PKCP 403
           PKCP
Sbjct: 85  PKCP 88


>ref|XP_002510126.1| GAST1 protein precursor, putative [Ricinus communis]
           gi|223550827|gb|EEF52313.1| GAST1 protein precursor,
           putative [Ricinus communis]
          Length = 88

 Score =  126 bits (316), Expect = 3e-27
 Identities = 50/64 (78%), Positives = 55/64 (85%)
 Frame = +2

Query: 212 SGSGYCDKKCSYRCALAGVSDRCLKYCGICCMECKCVPSGTFGNKHECPCYRDKKSSKGH 391
           +GSG+CD KC  RC  AGV DRCLKYCGICC +CKCVPSGT+GNKHECPCYRD K+SKG 
Sbjct: 25  AGSGFCDSKCEKRCEKAGVKDRCLKYCGICCEKCKCVPSGTYGNKHECPCYRDMKNSKGK 84

Query: 392 PKCP 403
           PKCP
Sbjct: 85  PKCP 88


>ref|XP_002327192.1| predicted protein [Populus trichocarpa] gi|222835507|gb|EEE73942.1|
           predicted protein [Populus trichocarpa]
          Length = 88

 Score =  126 bits (316), Expect = 3e-27
 Identities = 49/64 (76%), Positives = 56/64 (87%)
 Frame = +2

Query: 212 SGSGYCDKKCSYRCALAGVSDRCLKYCGICCMECKCVPSGTFGNKHECPCYRDKKSSKGH 391
           + SG+CD KCS RC+ AG+ DRCLKYCGICC +CKCVPSGT+GNKHECPCYRD K+SKG 
Sbjct: 25  AASGFCDSKCSVRCSKAGIKDRCLKYCGICCEKCKCVPSGTYGNKHECPCYRDMKNSKGK 84

Query: 392 PKCP 403
           PKCP
Sbjct: 85  PKCP 88


>gb|AFT92001.1| gibberellin-regulated protein [Populus tomentosa]
           gi|407260789|gb|AFT92013.1| gibberellin-regulated
           protein [Populus tomentosa]
          Length = 88

 Score =  125 bits (315), Expect = 4e-27
 Identities = 49/64 (76%), Positives = 56/64 (87%)
 Frame = +2

Query: 212 SGSGYCDKKCSYRCALAGVSDRCLKYCGICCMECKCVPSGTFGNKHECPCYRDKKSSKGH 391
           + SG+CD KCS RC+ AG+ DRCLKYCGICC +CKCVPSGT+GNKHECPCYRD K+SKG 
Sbjct: 25  AASGFCDSKCSARCSKAGIKDRCLKYCGICCEKCKCVPSGTYGNKHECPCYRDMKNSKGK 84

Query: 392 PKCP 403
           PKCP
Sbjct: 85  PKCP 88


>gb|ABQ42622.1| snakin-1 [Solanum chacoense]
          Length = 88

 Score =  125 bits (313), Expect = 7e-27
 Identities = 49/64 (76%), Positives = 56/64 (87%)
 Frame = +2

Query: 212 SGSGYCDKKCSYRCALAGVSDRCLKYCGICCMECKCVPSGTFGNKHECPCYRDKKSSKGH 391
           +GS +CD KC  RC+ AG++DRCLKYCGICC ECKCVPSGT+GNKHECPCYRDKK+SKG 
Sbjct: 25  AGSNFCDSKCKLRCSKAGLADRCLKYCGICCEECKCVPSGTYGNKHECPCYRDKKNSKGK 84

Query: 392 PKCP 403
            KCP
Sbjct: 85  SKCP 88


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