BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00028532
         (234 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002320339.1| tubulin gamma complex-associated protein [Po...    81   8e-14
ref|XP_004139048.1| PREDICTED: gamma-tubulin complex component 4...    80   1e-13
ref|NP_190944.2| gamma-tubulin complex component 4-like protein ...    74   9e-12
ref|XP_002877940.1| tubulin family protein [Arabidopsis lyrata s...    74   9e-12
ref|XP_002523094.1| gamma-tubulin complex component, putative [R...    74   9e-12

>ref|XP_002320339.1| tubulin gamma complex-associated protein [Populus trichocarpa]
           gi|222861112|gb|EEE98654.1| tubulin gamma
           complex-associated protein [Populus trichocarpa]
          Length = 728

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 42/79 (53%), Positives = 53/79 (67%), Gaps = 17/79 (21%)
 Frame = -3

Query: 193 GYTGDLIIPH--------------HSTFKLASDITFLQTPEREVIERLIKLGYYYKELDR 56
           GYTGDLII                H +FKLA DI+F+Q  +R++IER+I LG+YY+ELDR
Sbjct: 11  GYTGDLIIDEREHQNSLGIPISDEHRSFKLAPDISFIQPSDRDLIERIISLGFYYRELDR 70

Query: 55  FATNARNLSWV---NNNNE 8
           FAT +RNLSW+   N NNE
Sbjct: 71  FATKSRNLSWIRSANPNNE 89


>ref|XP_004139048.1| PREDICTED: gamma-tubulin complex component 4 homolog [Cucumis
           sativus]
          Length = 754

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 41/82 (50%), Positives = 52/82 (63%), Gaps = 20/82 (24%)
 Frame = -3

Query: 193 GYTGDLIIPHHS--------------------TFKLASDITFLQTPEREVIERLIKLGYY 74
           GYTGDLII                        TFKLASDI+FL+  ER++I+R+I LG+Y
Sbjct: 11  GYTGDLIIDEREHYNSLGLDNLLVDAPISGEPTFKLASDISFLEPSERDLIQRIIVLGFY 70

Query: 73  YKELDRFATNARNLSWVNNNNE 8
           Y+ELDRFAT +RNLSW+ + NE
Sbjct: 71  YRELDRFATKSRNLSWIRSGNE 92


>ref|NP_190944.2| gamma-tubulin complex component 4-like protein [Arabidopsis
           thaliana] gi|83302875|sp|Q9M350.2|GCP4_ARATH RecName:
           Full=Gamma-tubulin complex component 4 homolog
           gi|45773820|gb|AAS76714.1| At3g53760 [Arabidopsis
           thaliana] gi|46402452|gb|AAS92328.1| At3g53760
           [Arabidopsis thaliana] gi|332645618|gb|AEE79139.1|
           gamma-tubulin complex component 4-like protein
           [Arabidopsis thaliana]
          Length = 745

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 37/78 (47%), Positives = 49/78 (62%), Gaps = 19/78 (24%)
 Frame = -3

Query: 193 GYTGDLIIPHHS-------------------TFKLASDITFLQTPEREVIERLIKLGYYY 71
           G+TGDLI+                       TFKLA DI+F++  ER++IERLIKLG+YY
Sbjct: 11  GFTGDLIVDEREQRKTLGLAFNSDSPLSDECTFKLAPDISFIEPSERDLIERLIKLGFYY 70

Query: 70  KELDRFATNARNLSWVNN 17
           +ELDRFA  +RNLSW+ +
Sbjct: 71  RELDRFAKKSRNLSWIRS 88


>ref|XP_002877940.1| tubulin family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297323778|gb|EFH54199.1| tubulin family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 745

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 37/78 (47%), Positives = 49/78 (62%), Gaps = 19/78 (24%)
 Frame = -3

Query: 193 GYTGDLIIPHHS-------------------TFKLASDITFLQTPEREVIERLIKLGYYY 71
           G+TGDLI+                       TFKLA DI+F++  ER++IERLIKLG+YY
Sbjct: 11  GFTGDLIVDEREQRKTLGLAFNSDSPLSDECTFKLAPDISFIEPSERDLIERLIKLGFYY 70

Query: 70  KELDRFATNARNLSWVNN 17
           +ELDRFA  +RNLSW+ +
Sbjct: 71  RELDRFAKKSRNLSWIRS 88


>ref|XP_002523094.1| gamma-tubulin complex component, putative [Ricinus communis]
           gi|223537656|gb|EEF39279.1| gamma-tubulin complex
           component, putative [Ricinus communis]
          Length = 756

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 37/80 (46%), Positives = 49/80 (61%), Gaps = 19/80 (23%)
 Frame = -3

Query: 193 GYTGDLIIPHHS-------------------TFKLASDITFLQTPEREVIERLIKLGYYY 71
           GYTGDLII                       +FKLA DI+F+   +R++IER+I LG+YY
Sbjct: 11  GYTGDLIIDERGHQKSIGVHLSPDASISDERSFKLAPDISFIDPSDRDLIERIITLGFYY 70

Query: 70  KELDRFATNARNLSWVNNNN 11
           +ELDRFAT +RNLSW+ + N
Sbjct: 71  RELDRFATKSRNLSWIRSTN 90