BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00028528
         (707 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002316602.1| predicted protein [Populus trichocarpa] gi|2...   114   3e-23
emb|CAN74740.1| hypothetical protein VITISV_040899 [Vitis vinifera]   111   1e-22
ref|XP_003596625.1| F-box/LRR-repeat protein [Medicago truncatul...   110   4e-22
ref|NP_001030886.1| F-box/LRR-repeat protein [Arabidopsis thalia...   109   5e-22
ref|NP_001190131.1| F-box/LRR-repeat protein [Arabidopsis thalia...   109   5e-22

>ref|XP_002316602.1| predicted protein [Populus trichocarpa] gi|222859667|gb|EEE97214.1|
           predicted protein [Populus trichocarpa]
          Length = 460

 Score =  114 bits (284), Expect = 3e-23
 Identities = 76/204 (37%), Positives = 114/204 (55%), Gaps = 1/204 (0%)
 Frame = +2

Query: 14  KELSEEQSVSEGKDRFSSLPSTVLQYILSFIPTKEVVATSILSTRWKYLWTSHPNLIFDE 193
           K+L  E+    G+    +LP  +L++ILSF+ T+  V TSILS +W +LW S  NL F  
Sbjct: 13  KKLKAEKETDSGEKSIGNLPDALLEHILSFLSTEAAVRTSILSKKWLHLWKSTTNLTF-- 70

Query: 194 GIADEDPVEKKKFMDFVDRVLTLHAESNIKTLSITCK-DPDQSRIDAWISAAVQHKVQEL 370
               + P ++K FMDFVDRVL L   SNI    ++C+   D SR+  WISAAV   V++L
Sbjct: 71  -FGLKSP-KRKLFMDFVDRVLALRGPSNIVQFYLSCEVKDDPSRVGTWISAAVNRNVKDL 128

Query: 371 NLDVNVKECLSFVLLPELVCRSDSLSILELQSNLGIVIATPFSLPNLKILHLHSVLYSST 550
            L++   E  SFV LP  +   ++L+ LE+     + + +  SL  LKIL+L+ V+++  
Sbjct: 129 YLELRDFEA-SFV-LPHCLFNCETLTELEINMPYILKLPSSISLSCLKILNLYEVIFTDD 186

Query: 551 LPKKAKQPLLLNCPVLSELILDNC 622
              +     L + P L EL +  C
Sbjct: 187 HSTQQ----LFSLPNLVELEIHEC 206


>emb|CAN74740.1| hypothetical protein VITISV_040899 [Vitis vinifera]
          Length = 607

 Score =  111 bits (278), Expect = 1e-22
 Identities = 78/200 (39%), Positives = 111/200 (55%), Gaps = 6/200 (3%)
 Frame = +2

Query: 44  EGKDRFSSLPSTVLQYILSFIPTKEVVATSILSTRWKYLWTSHPNLIFDE--GIADEDPV 217
           E +D  S+LP  +L +ILSF+PTK  V TSILS RW+YLW S P L FD+   +     V
Sbjct: 7   ESRDIISNLPDELLCHILSFLPTKFAVGTSILSKRWRYLWASVPILDFDDELWLNPSTLV 66

Query: 218 EKKK----FMDFVDRVLTLHAESNIKTLSITCKDPDQSRIDAWISAAVQHKVQELNLDVN 385
           E ++    F +FVD VL     S IK   +  +D +   + +WI  A++ +VQEL+L + 
Sbjct: 67  ELEERIIMFQNFVDGVLRHSEVSCIKKFRLGYRDNNLDSVYSWICIALERRVQELDLHLL 126

Query: 386 VKECLSFVLLPELVCRSDSLSILELQSNLGIVIATPFSLPNLKILHLHSVLYSSTLPKKA 565
           +      V LP +     +L +++L   L + I T   LP+LK LHL SV YS      +
Sbjct: 127 ID---WRVELPPMFFICKTLVVVKLSCALFLDIPTTVWLPSLKALHLKSVEYSD---DDS 180

Query: 566 KQPLLLNCPVLSELILDNCE 625
            Q LL  CPVL EL+++  E
Sbjct: 181 IQKLLSGCPVLEELVIEREE 200


>ref|XP_003596625.1| F-box/LRR-repeat protein [Medicago truncatula]
           gi|355485673|gb|AES66876.1| F-box/LRR-repeat protein
           [Medicago truncatula]
          Length = 411

 Score =  110 bits (274), Expect = 4e-22
 Identities = 71/204 (34%), Positives = 115/204 (56%), Gaps = 2/204 (0%)
 Frame = +2

Query: 17  ELSEEQSVSEGKDRFSSLPSTVLQYILSFIPTKEVVATSILSTRWKYLWTSHPNLIFDE- 193
           +LS+ Q  ++G+D  S+LP  ++  +LSF+PTK+ V+TS+LS RW YLWT    L FD+ 
Sbjct: 15  KLSKRQKSNKGQDLISNLPDHIIGCVLSFLPTKDAVSTSVLSKRWIYLWTFITKLDFDDI 74

Query: 194 GIADEDPVEKKKFMDFVDRVLTLHAESNIKTLSITCKDP-DQSRIDAWISAAVQHKVQEL 370
           G    + + K  F+DFVDRVL      +I++ S+   +  D S I+ WIS  +  +V++L
Sbjct: 75  GYCSSNEIRKACFVDFVDRVLLRLNSEHIRSFSLKMSEKYDSSYINKWISIVINLRVRKL 134

Query: 371 NLDVNVKECLSFVLLPELVCRSDSLSILELQSNLGIVIATPFSLPNLKILHLHSVLYSST 550
              V ++  L+    P L C+S    +L   S   I ++T   L +L +L+L+ ++ S +
Sbjct: 135 R--VYLQNDLAVSSDPLLKCQSLEELVL---SRCAITLSTFVCLSSLAVLNLYCIIISCS 189

Query: 551 LPKKAKQPLLLNCPVLSELILDNC 622
               +K  L LN PVL + +   C
Sbjct: 190 SSNDSK-TLTLNFPVLRKFVTFGC 212


>ref|NP_001030886.1| F-box/LRR-repeat protein [Arabidopsis thaliana]
           gi|332646326|gb|AEE79847.1| F-box/LRR-repeat protein
           [Arabidopsis thaliana]
          Length = 314

 Score =  109 bits (273), Expect = 5e-22
 Identities = 82/203 (40%), Positives = 108/203 (53%), Gaps = 9/203 (4%)
 Frame = +2

Query: 53  DRFSSLPSTVLQYILSFIPTKEVVATSILSTRWKYLWTSHPNLIFDEGI---ADEDPVEK 223
           D FSSLP+ +L +ILSF+ TKE   TS+LS RW+ L+   P L FD+ +    +E   EK
Sbjct: 2   DLFSSLPNELLYHILSFLSTKEAALTSVLSKRWRNLFAFVPYLEFDDSVFLHPEERKREK 61

Query: 224 ----KKFMDFVDRVLTLHAESNIKTLSITCK-DPDQSRIDAWISAAVQHKVQELNLDVNV 388
               + FMDFVDRVL LH +S IKT S+ CK   D   +D WI   +   V +L+L ++ 
Sbjct: 62  EGILQSFMDFVDRVLDLHGDSLIKTFSLKCKTGVDSDHVDRWICNVLARGVSDLDLFIDF 121

Query: 389 KECLSFVLLPELVCRSDSLSILELQSNLGIVIATPF-SLPNLKILHLHSVLYSSTLPKKA 565
           ++  S   LP  V  S +L +L + S   +     F  LP LK L    VL S  L    
Sbjct: 122 RDLYS---LPHEVGVSRTLVVLRVGSESDLYWWQKFLCLPMLKTL----VLDSCWLCIGQ 174

Query: 566 KQPLLLNCPVLSELILDNCEMPD 634
            Q LLL CP L EL + N    D
Sbjct: 175 FQILLLACPALEELDMTNTRWKD 197


>ref|NP_001190131.1| F-box/LRR-repeat protein [Arabidopsis thaliana]
           gi|332646327|gb|AEE79848.1| F-box/LRR-repeat protein
           [Arabidopsis thaliana]
          Length = 465

 Score =  109 bits (273), Expect = 5e-22
 Identities = 82/203 (40%), Positives = 108/203 (53%), Gaps = 9/203 (4%)
 Frame = +2

Query: 53  DRFSSLPSTVLQYILSFIPTKEVVATSILSTRWKYLWTSHPNLIFDEGI---ADEDPVEK 223
           D FSSLP+ +L +ILSF+ TKE   TS+LS RW+ L+   P L FD+ +    +E   EK
Sbjct: 2   DLFSSLPNELLYHILSFLSTKEAALTSVLSKRWRNLFAFVPYLEFDDSVFLHPEERKREK 61

Query: 224 ----KKFMDFVDRVLTLHAESNIKTLSITCK-DPDQSRIDAWISAAVQHKVQELNLDVNV 388
               + FMDFVDRVL LH +S IKT S+ CK   D   +D WI   +   V +L+L ++ 
Sbjct: 62  EGILQSFMDFVDRVLDLHGDSLIKTFSLKCKTGVDSDHVDRWICNVLARGVSDLDLFIDF 121

Query: 389 KECLSFVLLPELVCRSDSLSILELQSNLGIVIATPF-SLPNLKILHLHSVLYSSTLPKKA 565
           ++  S   LP  V  S +L +L + S   +     F  LP LK L    VL S  L    
Sbjct: 122 RDLYS---LPHEVGVSRTLVVLRVGSESDLYWWQKFLCLPMLKTL----VLDSCWLCIGQ 174

Query: 566 KQPLLLNCPVLSELILDNCEMPD 634
            Q LLL CP L EL + N    D
Sbjct: 175 FQILLLACPALEELDMTNTRWKD 197