BLASTX nr result

ID: Coptis21_contig00028522 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00028522
         (518 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266878.1| PREDICTED: uncharacterized protein LOC100255...    89   4e-16
ref|XP_002331820.1| predicted protein [Populus trichocarpa] gi|2...    79   5e-13
ref|NP_001032066.1| uncharacterized protein [Arabidopsis thalian...    77   1e-12
dbj|BAB09784.1| unnamed protein product [Arabidopsis thaliana]         77   1e-12
gb|AAU44593.1| hypothetical protein AT5G53220 [Arabidopsis thali...    77   1e-12

>ref|XP_002266878.1| PREDICTED: uncharacterized protein LOC100255280 [Vitis vinifera]
           gi|302143706|emb|CBI22567.3| unnamed protein product
           [Vitis vinifera]
          Length = 673

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 40/80 (50%), Positives = 57/80 (71%)
 Frame = -2

Query: 517 EKPMGRSLHATSRGFSKSDERSITTLATFLLEGSEKGDVKKNISDLERYEPRGLEECKRL 338
           EK +  ++++  RGFS+ D    TTLA +L +G  +GD+KK++ DL++Y P+ LE C+ L
Sbjct: 591 EKTVKETIYSNQRGFSQCDALRGTTLAEYLTDGDPQGDLKKSVKDLQQYHPKALELCRTL 650

Query: 337 ARFHYKQLFTIYQNKEDPFF 278
           A  + KQLF IYQNKEDPFF
Sbjct: 651 ATHYSKQLFAIYQNKEDPFF 670


>ref|XP_002331820.1| predicted protein [Populus trichocarpa] gi|222875058|gb|EEF12189.1|
           predicted protein [Populus trichocarpa]
          Length = 580

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 37/80 (46%), Positives = 52/80 (65%)
 Frame = -2

Query: 517 EKPMGRSLHATSRGFSKSDERSITTLATFLLEGSEKGDVKKNISDLERYEPRGLEECKRL 338
           EK    +LH   RGFSK D    + LA FL++G   GD+KK++ +L+ Y  +G+  C++L
Sbjct: 493 EKLNKETLHGNGRGFSKFDAPRGSKLAEFLIDGDPSGDLKKSVLELQAYNSKGVTLCRKL 552

Query: 337 ARFHYKQLFTIYQNKEDPFF 278
           A  + KQLF IY+NKEDP F
Sbjct: 553 ATHYSKQLFQIYKNKEDPLF 572


>ref|NP_001032066.1| uncharacterized protein [Arabidopsis thaliana]
           gi|79536815|ref|NP_200134.2| uncharacterized protein
           [Arabidopsis thaliana] gi|186531691|ref|NP_001119424.1|
           uncharacterized protein [Arabidopsis thaliana]
           gi|60547941|gb|AAX23934.1| hypothetical protein
           At5g53220 [Arabidopsis thaliana]
           gi|332008941|gb|AED96324.1| uncharacterized protein
           [Arabidopsis thaliana] gi|332008942|gb|AED96325.1|
           uncharacterized protein [Arabidopsis thaliana]
           gi|332008943|gb|AED96326.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 368

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 37/81 (45%), Positives = 58/81 (71%), Gaps = 1/81 (1%)
 Frame = -2

Query: 517 EKPMGRSLHATS-RGFSKSDERSITTLATFLLEGSEKGDVKKNISDLERYEPRGLEECKR 341
           ++ + RS H ++ RGFSK D    T++A FL +G   GD+KK++ +L+ ++ +G+E+C+ 
Sbjct: 282 DEKVERSSHVSNGRGFSKVDAVRGTSIALFLTDGDSAGDMKKSVEELKVFDFKGVEKCEE 341

Query: 340 LARFHYKQLFTIYQNKEDPFF 278
           LAR + KQLF IY N+EDPFF
Sbjct: 342 LARKYSKQLFQIYNNREDPFF 362


>dbj|BAB09784.1| unnamed protein product [Arabidopsis thaliana]
          Length = 441

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 37/81 (45%), Positives = 58/81 (71%), Gaps = 1/81 (1%)
 Frame = -2

Query: 517 EKPMGRSLHATS-RGFSKSDERSITTLATFLLEGSEKGDVKKNISDLERYEPRGLEECKR 341
           ++ + RS H ++ RGFSK D    T++A FL +G   GD+KK++ +L+ ++ +G+E+C+ 
Sbjct: 355 DEKVERSSHVSNGRGFSKVDAVRGTSIALFLTDGDSAGDMKKSVEELKVFDFKGVEKCEE 414

Query: 340 LARFHYKQLFTIYQNKEDPFF 278
           LAR + KQLF IY N+EDPFF
Sbjct: 415 LARKYSKQLFQIYNNREDPFF 435


>gb|AAU44593.1| hypothetical protein AT5G53220 [Arabidopsis thaliana]
           gi|52354547|gb|AAU44594.1| hypothetical protein
           AT5G53220 [Arabidopsis thaliana]
          Length = 368

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 37/81 (45%), Positives = 58/81 (71%), Gaps = 1/81 (1%)
 Frame = -2

Query: 517 EKPMGRSLHATS-RGFSKSDERSITTLATFLLEGSEKGDVKKNISDLERYEPRGLEECKR 341
           ++ + RS H ++ RGFSK D    T++A FL +G   GD+KK++ +L+ ++ +G+E+C+ 
Sbjct: 282 DEKVERSSHVSNGRGFSKVDAVRGTSIALFLTDGDSAGDMKKSVEELKVFDFKGVEKCEE 341

Query: 340 LARFHYKQLFTIYQNKEDPFF 278
           LAR + KQLF IY N+EDPFF
Sbjct: 342 LARKYSKQLFQIYNNREDPFF 362