BLASTX nr result

ID: Coptis21_contig00028503 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00028503
         (475 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI36674.3| unnamed protein product [Vitis vinifera]               77   2e-12
ref|XP_003604839.1| hypothetical protein MTR_4g019340 [Medicago ...    72   5e-11
ref|XP_003529918.1| PREDICTED: uncharacterized protein LOC100812...    69   3e-10
ref|XP_003604756.1| hypothetical protein MTR_4g017440 [Medicago ...    69   4e-10
gb|AFW78327.1| hypothetical protein ZEAMMB73_424215 [Zea mays]         69   5e-10

>emb|CBI36674.3| unnamed protein product [Vitis vinifera]
          Length = 612

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 48/109 (44%), Positives = 61/109 (55%), Gaps = 1/109 (0%)
 Frame = -1

Query: 430 KMISLKLMVSKSQNKVLYAEAGADXXXXXXXXXXXXLGSIIKLLGGNCSMGCIANLYSSV 251
           + + +KL++ KS  +VL  EA  D            LGSIIKLL G+ S+GC+ NLY SV
Sbjct: 379 RKMKVKLLIDKSSRRVLCLEAKEDFVNLVLSFLTFPLGSIIKLLRGHSSLGCMDNLYRSV 438

Query: 250 TSVMVSDCTKSEKYSGILLDPKLPQHFNCSSQVLRIDEEAPMQY-CYLC 107
            S  + DC KS K   +LL PKLP  F+  +Q L I EE P  Y  Y C
Sbjct: 439 GSSKLEDCFKSTKCKEMLLSPKLPMDFSL-NQSLPIREEDPATYRSYKC 486


>ref|XP_003604839.1| hypothetical protein MTR_4g019340 [Medicago truncatula]
           gi|355505894|gb|AES87036.1| hypothetical protein
           MTR_4g019340 [Medicago truncatula]
          Length = 506

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 47/129 (36%), Positives = 64/129 (49%)
 Frame = -1

Query: 424 ISLKLMVSKSQNKVLYAEAGADXXXXXXXXXXXXLGSIIKLLGGNCSMGCIANLYSSVTS 245
           + +KL+ SKSQ K++ AEA  +            LGSI+K+L GN  +GC+ NLY SV S
Sbjct: 304 MDVKLVRSKSQKKIICAEASGNFVDFMFSFLTIPLGSIVKVLDGNSFVGCVDNLYKSVES 363

Query: 244 VMVSDCTKSEKYSGILLDPKLPQHFNCSSQVLRIDEEAPMQYCYLCIVGRLHSGSFPCPY 65
           +  S CT S     +LL+P +  HF C +Q L I    P    Y    G      + C Y
Sbjct: 364 LDSSWCTNSR---SMLLNPGVAPHFGCPNQPLNIPHVQPPLTTYYYGTG-TPKQEYNCHY 419

Query: 64  HENQVELNV 38
               VEL +
Sbjct: 420 GYQTVELTI 428


>ref|XP_003529918.1| PREDICTED: uncharacterized protein LOC100812611 [Glycine max]
          Length = 499

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 43/108 (39%), Positives = 57/108 (52%)
 Frame = -1

Query: 424 ISLKLMVSKSQNKVLYAEAGADXXXXXXXXXXXXLGSIIKLLGGNCSMGCIANLYSSVTS 245
           + +KLMVSKS+NKVL+AEA  D            LGSI+ L+ G  S+G I NLY+SV  
Sbjct: 255 VEIKLMVSKSKNKVLFAEADGDFVDFLVSFLTTPLGSILNLMNGKSSLGSIDNLYASVKK 314

Query: 244 VMVSDCTKSEKYSGILLDPKLPQHFNCSSQVLRIDEEAPMQYCYLCIV 101
           +  S    S   S  LL+P++   F C S  L   +E    Y Y  +V
Sbjct: 315 LNASWFIGSSNKS--LLNPRVAPQFGCGSNPLNASQEYTPTYWYGTVV 360


>ref|XP_003604756.1| hypothetical protein MTR_4g017440 [Medicago truncatula]
           gi|355505811|gb|AES86953.1| hypothetical protein
           MTR_4g017440 [Medicago truncatula]
          Length = 508

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 43/115 (37%), Positives = 60/115 (52%), Gaps = 1/115 (0%)
 Frame = -1

Query: 454 RKCQLNNSKMISLKLMVSKSQNKVLYAEAGADXXXXXXXXXXXXLGSIIKLLGGNCSMGC 275
           + C    +KM  +K++ S SQ K+++ EA  D            LGSI+KLL GN   GC
Sbjct: 266 KPCASGGTKM-DVKVVRSISQKKIIFVEANGDFVGFIFSFLTMPLGSIVKLLDGNSIAGC 324

Query: 274 IANLYSSVTSVMVSDCTKSEKYSGILLDPKLPQHFNCSSQVLRI-DEEAPMQYCY 113
           + NLY SV  +  S CT S     +LL+P +  +F C +Q L I D + P  Y Y
Sbjct: 325 VGNLYKSVEKMDSSLCTNSRT---VLLNPGVAPYFGCPNQPLNIPDLQPPTTYYY 376


>gb|AFW78327.1| hypothetical protein ZEAMMB73_424215 [Zea mays]
          Length = 615

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 43/124 (34%), Positives = 67/124 (54%), Gaps = 6/124 (4%)
 Frame = -1

Query: 424 ISLKLMVSKSQNKVLYAEAGADXXXXXXXXXXXXLGSIIKLLGGNCSMGCIANLYSSVT- 248
           + ++++++K  + +LYAE G D            LGS IKL G   + GC+ N+Y S+  
Sbjct: 368 LKIRVLLTKDNSALLYAEVGVDFVDSLFGLLSIPLGSAIKLYGQCSAKGCLGNVYMSIDG 427

Query: 247 SVMVSDCTKSEKYSGILLDPKLPQHFN-CSSQVLRIDEEAP----MQYCYLCIVGRLHSG 83
           SV V      E+   +LLDPKLP  F  C+S++L++DE AP    ++ C++C      SG
Sbjct: 428 SVQV---FVREECQSLLLDPKLPPFFGCCASKILQVDELAPRELTIKACFVCFKSLGFSG 484

Query: 82  SFPC 71
              C
Sbjct: 485 CSRC 488


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