BLASTX nr result

ID: Coptis21_contig00028432 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00028432
         (682 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI14979.3| unnamed protein product [Vitis vinifera]              200   2e-49
ref|XP_002278259.2| PREDICTED: uncharacterized protein LOC100245...   184   1e-44
gb|AFK39377.1| unknown [Medicago truncatula]                          163   3e-38
ref|XP_002511350.1| nucleic acid binding protein, putative [Rici...   161   1e-37
ref|NP_001190910.1| D111/G-patch domain-containing protein [Arab...   158   8e-37

>emb|CBI14979.3| unnamed protein product [Vitis vinifera]
          Length = 483

 Score =  200 bits (509), Expect = 2e-49
 Identities = 106/215 (49%), Positives = 135/215 (62%)
 Frame = -1

Query: 682 PPPSEWLEETLINLYLTGYSNSVTDLADNLVTPTDPDVGCDSDLLVNGEESDSTREIEEG 503
           PPPSEWLE+TLI+LYL+GYS +  +  D +  P + D G +  L  +G   D   E   G
Sbjct: 133 PPPSEWLEDTLIDLYLSGYSTTAINATDEVRMPLETDEGDNFKLSAHGNGDDHELE---G 189

Query: 502 EWIVEDLQDATESSGRLSDEGISWDEENWRAQYGQVVQXXXXXXXXXXXXXXXXWEMFTN 323
           E ++ED    T+S G +  +G SWDEENWRAQYGQV++                     +
Sbjct: 190 ECVLEDHHGVTDSIGNVVAKGDSWDEENWRAQYGQVIKSEDSIPNFPVVDLW-------D 242

Query: 322 TVVXXXXXXXXXRQLSRLIGKLVKPSTKLHPSMPSGGRLLRTAAICETSLALVRVSSGQV 143
             +          Q++RL+G+LV+ STKLHPSMPSGG L++TA ICE  L LVRV+SGQV
Sbjct: 243 WAMVSGVKKDGKGQVARLVGRLVRQSTKLHPSMPSGGGLMKTAPICEVHLDLVRVTSGQV 302

Query: 142 YRLKSPSMKYLASLSTYDSSNPTKDWGFPDIVFDK 38
           YRLKSPS +YLASLS YDSSNPTKDW FP +  D+
Sbjct: 303 YRLKSPSSRYLASLSIYDSSNPTKDWSFPKLSVDQ 337


>ref|XP_002278259.2| PREDICTED: uncharacterized protein LOC100245077 [Vitis vinifera]
          Length = 421

 Score =  184 bits (468), Expect = 1e-44
 Identities = 100/209 (47%), Positives = 129/209 (61%)
 Frame = -1

Query: 664 LEETLINLYLTGYSNSVTDLADNLVTPTDPDVGCDSDLLVNGEESDSTREIEEGEWIVED 485
           LE+TLI+LYL+GYS +  +  D +  P + D G +  L  +G   D   E   GE ++ED
Sbjct: 77  LEDTLIDLYLSGYSTTAINATDEVRMPLETDEGDNFKLSAHGNGDDHELE---GECVLED 133

Query: 484 LQDATESSGRLSDEGISWDEENWRAQYGQVVQXXXXXXXXXXXXXXXXWEMFTNTVVXXX 305
               T+S G +  +G SWDEENWRAQYGQV++                     +  +   
Sbjct: 134 HHGVTDSIGNVVAKGDSWDEENWRAQYGQVIKSEDSIPNFPVVDLW-------DWAMVSG 186

Query: 304 XXXXXXRQLSRLIGKLVKPSTKLHPSMPSGGRLLRTAAICETSLALVRVSSGQVYRLKSP 125
                  Q++RL+G+LV+ STKLHPSMPSGG L++TA ICE  L LVRV+SGQVYRLKSP
Sbjct: 187 VKKDGKGQVARLVGRLVRQSTKLHPSMPSGGGLMKTAPICEVHLDLVRVTSGQVYRLKSP 246

Query: 124 SMKYLASLSTYDSSNPTKDWGFPDIVFDK 38
           S +YLASLS YDSSNPTKDW FP +  D+
Sbjct: 247 SSRYLASLSIYDSSNPTKDWSFPKLSVDQ 275


>gb|AFK39377.1| unknown [Medicago truncatula]
          Length = 507

 Score =  163 bits (412), Expect = 3e-38
 Identities = 94/240 (39%), Positives = 129/240 (53%), Gaps = 29/240 (12%)
 Frame = -1

Query: 682 PPPSEWLEETLINLYLTGYSNSVTDLADNLVTPTDPD---------------------VG 566
           PPPSEWLE+TLI+LYL+GY+N     AD +  P + +                      G
Sbjct: 131 PPPSEWLEDTLIDLYLSGYNNIAVSAADTVTDPVETNGYNFTLETDAYRNAEMGGDWTTG 190

Query: 565 CDSDLLVNGEES--------DSTREIEEGEWIVEDLQDATESSGRLSDEGISWDEENWRA 410
              +  +NG E             E+EEGEWI +   +   + G   DEGI ++EE WRA
Sbjct: 191 PADENDMNGNEKTVDDIVAYSDAYEVEEGEWIPDPEDENHLADGSSIDEGILFEEEKWRA 250

Query: 409 QYGQVVQXXXXXXXXXXXXXXXXWEMFTNTVVXXXXXXXXXRQLSRLIGKLVKPSTKLHP 230
           QYGQV++                WEM   +            +++RL+G+LVK S K HP
Sbjct: 251 QYGQVIESREDLVLEFPVLDLWNWEMVRAS------KKDGKDRVARLVGRLVKQSAKRHP 304

Query: 229 SMPSGGRLLRTAAICETSLALVRVSSGQVYRLKSPSMKYLASLSTYDSSNPTKDWGFPDI 50
           S+ S  +  R+A ICE  L LVRV +GQVYRL++PS +Y+ASLS+YDS++PTKDW FP +
Sbjct: 305 SISSVEKKFRSAPICEVDLDLVRVKTGQVYRLRNPSARYVASLSSYDSADPTKDWDFPQL 364


>ref|XP_002511350.1| nucleic acid binding protein, putative [Ricinus communis]
           gi|223550465|gb|EEF51952.1| nucleic acid binding
           protein, putative [Ricinus communis]
          Length = 417

 Score =  161 bits (407), Expect = 1e-37
 Identities = 98/218 (44%), Positives = 123/218 (56%)
 Frame = -1

Query: 664 LEETLINLYLTGYSNSVTDLADNLVTPTDPDVGCDSDLLVNGEESDSTREIEEGEWIVED 485
           LEETLINLYL+GY  SV D AD     +D          V+G   D T+ +E+G+W+ E 
Sbjct: 82  LEETLINLYLSGYKQSVDD-ADVSKMSSD----------VDGASHDDTQMLEDGDWMSEH 130

Query: 484 LQDATESSGRLSDEGISWDEENWRAQYGQVVQXXXXXXXXXXXXXXXXWEMFTNTVVXXX 305
               T     +S+E    DEENW+AQYGQVV                 W M T +     
Sbjct: 131 HPTLTSGCESISNEDACKDEENWQAQYGQVVYSGEQPLEDFHAVDLWDWAMVTGS----- 185

Query: 304 XXXXXXRQLSRLIGKLVKPSTKLHPSMPSGGRLLRTAAICETSLALVRVSSGQVYRLKSP 125
                    +RL+G+LVK S KLHPSMPS G L RTA ICE  L LVRV +G VY+L +P
Sbjct: 186 -RKDGKDHTTRLVGRLVKRSAKLHPSMPSSG-LFRTAPICEAHLDLVRVRTGLVYKLHTP 243

Query: 124 SMKYLASLSTYDSSNPTKDWGFPDIVFDKQGYDSPKLW 11
           S +YLASLS+YDSSNPT DWGFP++  + Q   + K +
Sbjct: 244 SARYLASLSSYDSSNPTIDWGFPELSTNGQAISTTKFY 281


>ref|NP_001190910.1| D111/G-patch domain-containing protein [Arabidopsis thaliana]
           gi|332660933|gb|AEE86333.1| D111/G-patch
           domain-containing protein [Arabidopsis thaliana]
          Length = 501

 Score =  158 bits (400), Expect = 8e-37
 Identities = 95/220 (43%), Positives = 125/220 (56%)
 Frame = -1

Query: 676 PSEWLEETLINLYLTGYSNSVTDLADNLVTPTDPDVGCDSDLLVNGEESDSTREIEEGEW 497
           PS W+E+TLI LYL GY N     +       + +  C   L  NG+  D   E+EEGEW
Sbjct: 129 PSSWVEDTLIELYLDGY-NQHPSASSYERASGENNQDCQM-LSANGD--DDAEELEEGEW 184

Query: 496 IVEDLQDATESSGRLSDEGISWDEENWRAQYGQVVQXXXXXXXXXXXXXXXXWEMFTNTV 317
           I E+  D  E +    +   S +EE W AQYGQV++                W++   T 
Sbjct: 185 IPEEDFDPQEEN--FGEAAPSSEEERWLAQYGQVIESPGKTLPEIPSVDLWDWKLVCET- 241

Query: 316 VXXXXXXXXXRQLSRLIGKLVKPSTKLHPSMPSGGRLLRTAAICETSLALVRVSSGQVYR 137
                      Q++RL+G+LV+ S  LHPS+ SGG LL+TA ICE  L LVRV +GQVY+
Sbjct: 242 -----READNEQVARLVGRLVRQSANLHPSVVSGGTLLKTAPICEARLHLVRVRTGQVYK 296

Query: 136 LKSPSMKYLASLSTYDSSNPTKDWGFPDIVFDKQGYDSPK 17
           L++PS KYLASLS YD+SNPTKDW FPDI  + Q  D+ +
Sbjct: 297 LRNPSAKYLASLSVYDASNPTKDWEFPDISTEWQNPDTKR 336


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